diff --git a/documentation/doxygen/CLASSDoxygen.html b/documentation/doxygen/CLASSDoxygen.html
deleted file mode 100644
index da054dd2333eaf0bef6cd68746124096aaca30c2..0000000000000000000000000000000000000000
--- a/documentation/doxygen/CLASSDoxygen.html
+++ /dev/null
@@ -1,4 +0,0 @@
-  <li>
-    <a href="html/doxygen/html/inherits.html"> Doxygen documentation for CLASS </a>
-  </li>
-</ul>
\ No newline at end of file
diff --git a/documentation/doxygen/Doxyfile b/documentation/doxygen/Doxyfile
deleted file mode 100755
index 58430d124fc9ed07f0273ce214995a77a09ab6d3..0000000000000000000000000000000000000000
--- a/documentation/doxygen/Doxyfile
+++ /dev/null
@@ -1,2364 +0,0 @@
-# Doxyfile 1.8.6
-
-# This file describes the settings to be used by the documentation system
-# doxygen (www.doxygen.org) for a project.
-#
-# All text after a double hash (##) is considered a comment and is placed in
-# front of the TAG it is preceding.
-#
-# All text after a single hash (#) is considered a comment and will be ignored.
-# The format is:
-# TAG = value [value, ...]
-# For lists, items can also be appended using:
-# TAG += value [value, ...]
-# Values that contain spaces should be placed between quotes (\" \").
-
-#---------------------------------------------------------------------------
-# Project related configuration options
-#---------------------------------------------------------------------------
-
-# This tag specifies the encoding used for all characters in the config file
-# that follow. The default is UTF-8 which is also the encoding used for all text
-# before the first occurrence of this tag. Doxygen uses libiconv (or the iconv
-# built into libc) for the transcoding. See http://www.gnu.org/software/libiconv
-# for the list of possible encodings.
-# The default value is: UTF-8.
-
-DOXYFILE_ENCODING      = UTF-8
-
-# The PROJECT_NAME tag is a single word (or a sequence of words surrounded by
-# double-quotes, unless you are using Doxywizard) that should identify the
-# project for which the documentation is generated. This name is used in the
-# title of most generated pages and in a few other places.
-# The default value is: My Project.
-
-PROJECT_NAME           = CLASS
-
-# The PROJECT_NUMBER tag can be used to enter a project or revision number. This
-# could be handy for archiving the generated documentation or if some version
-# control system is used.
-
-PROJECT_NUMBER         = 4.1
-
-# Using the PROJECT_BRIEF tag one can provide an optional one line description
-# for a project that appears at the top of each page and should give viewer a
-# quick idea about the purpose of the project. Keep the description short.
-
-PROJECT_BRIEF          = Core_Librairy_for_Advance_Scenario_Simulation
-
-# With the PROJECT_LOGO tag one can specify an logo or icon that is included in
-# the documentation. The maximum height of the logo should not exceed 55 pixels
-# and the maximum width should not exceed 200 pixels. Doxygen will copy the logo
-# to the output directory.
-
-PROJECT_LOGO           = 
-
-# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) path
-# into which the generated documentation will be written. If a relative path is
-# entered, it will be relative to the location where doxygen was started. If
-# left blank the current directory will be used.
-
-OUTPUT_DIRECTORY       = ./html/doxygen
-
-# If the CREATE_SUBDIRS tag is set to YES, then doxygen will create 4096 sub-
-# directories (in 2 levels) under the output directory of each output format and
-# will distribute the generated files over these directories. Enabling this
-# option can be useful when feeding doxygen a huge amount of source files, where
-# putting all generated files in the same directory would otherwise causes
-# performance problems for the file system.
-# The default value is: NO.
-
-CREATE_SUBDIRS         = YES
-
-# The OUTPUT_LANGUAGE tag is used to specify the language in which all
-# documentation generated by doxygen is written. Doxygen will use this
-# information to generate all constant output in the proper language.
-# Possible values are: Afrikaans, Arabic, Armenian, Brazilian, Catalan, Chinese,
-# Chinese-Traditional, Croatian, Czech, Danish, Dutch, English (United States),
-# Esperanto, Farsi (Persian), Finnish, French, German, Greek, Hungarian,
-# Indonesian, Italian, Japanese, Japanese-en (Japanese with English messages),
-# Korean, Korean-en (Korean with English messages), Latvian, Lithuanian,
-# Macedonian, Norwegian, Persian (Farsi), Polish, Portuguese, Romanian, Russian,
-# Serbian, Serbian-Cyrillic, Slovak, Slovene, Spanish, Swedish, Turkish,
-# Ukrainian and Vietnamese.
-# The default value is: English.
-
-OUTPUT_LANGUAGE        = English
-
-# If the BRIEF_MEMBER_DESC tag is set to YES doxygen will include brief member
-# descriptions after the members that are listed in the file and class
-# documentation (similar to Javadoc). Set to NO to disable this.
-# The default value is: YES.
-
-BRIEF_MEMBER_DESC      = YES
-
-# If the REPEAT_BRIEF tag is set to YES doxygen will prepend the brief
-# description of a member or function before the detailed description
-#
-# Note: If both HIDE_UNDOC_MEMBERS and BRIEF_MEMBER_DESC are set to NO, the
-# brief descriptions will be completely suppressed.
-# The default value is: YES.
-
-REPEAT_BRIEF           = YES
-
-# This tag implements a quasi-intelligent brief description abbreviator that is
-# used to form the text in various listings. Each string in this list, if found
-# as the leading text of the brief description, will be stripped from the text
-# and the result, after processing the whole list, is used as the annotated
-# text. Otherwise, the brief description is used as-is. If left blank, the
-# following values are used ($name is automatically replaced with the name of
-# the entity):The $name class, The $name widget, The $name file, is, provides,
-# specifies, contains, represents, a, an and the.
-
-ABBREVIATE_BRIEF       = "The $name class" \
-                         "The $name widget" \
-                         "The $name file" \
-                         is \
-                         provides \
-                         specifies \
-                         contains \
-                         represents \
-                         a \
-                         an \
-                         the
-
-# If the ALWAYS_DETAILED_SEC and REPEAT_BRIEF tags are both set to YES then
-# doxygen will generate a detailed section even if there is only a brief
-# description.
-# The default value is: NO.
-
-ALWAYS_DETAILED_SEC    = NO
-
-# If the INLINE_INHERITED_MEMB tag is set to YES, doxygen will show all
-# inherited members of a class in the documentation of that class as if those
-# members were ordinary class members. Constructors, destructors and assignment
-# operators of the base classes will not be shown.
-# The default value is: NO.
-
-INLINE_INHERITED_MEMB  = YES
-
-# If the FULL_PATH_NAMES tag is set to YES doxygen will prepend the full path
-# before files name in the file list and in the header files. If set to NO the
-# shortest path that makes the file name unique will be used
-# The default value is: YES.
-
-FULL_PATH_NAMES        = NO
-
-# The STRIP_FROM_PATH tag can be used to strip a user-defined part of the path.
-# Stripping is only done if one of the specified strings matches the left-hand
-# part of the path. The tag can be used to show relative paths in the file list.
-# If left blank the directory from which doxygen is run is used as the path to
-# strip.
-#
-# Note that you can specify absolute paths here, but also relative paths, which
-# will be relative from the directory where doxygen is started.
-# This tag requires that the tag FULL_PATH_NAMES is set to YES.
-
-STRIP_FROM_PATH        = 
-
-# The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of the
-# path mentioned in the documentation of a class, which tells the reader which
-# header file to include in order to use a class. If left blank only the name of
-# the header file containing the class definition is used. Otherwise one should
-# specify the list of include paths that are normally passed to the compiler
-# using the -I flag.
-
-STRIP_FROM_INC_PATH    = 
-
-# If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter (but
-# less readable) file names. This can be useful is your file systems doesn't
-# support long names like on DOS, Mac, or CD-ROM.
-# The default value is: NO.
-
-SHORT_NAMES            = NO
-
-# If the JAVADOC_AUTOBRIEF tag is set to YES then doxygen will interpret the
-# first line (until the first dot) of a Javadoc-style comment as the brief
-# description. If set to NO, the Javadoc-style will behave just like regular Qt-
-# style comments (thus requiring an explicit @brief command for a brief
-# description.)
-# The default value is: NO.
-
-JAVADOC_AUTOBRIEF      = YES
-
-# If the QT_AUTOBRIEF tag is set to YES then doxygen will interpret the first
-# line (until the first dot) of a Qt-style comment as the brief description. If
-# set to NO, the Qt-style will behave just like regular Qt-style comments (thus
-# requiring an explicit \brief command for a brief description.)
-# The default value is: NO.
-
-QT_AUTOBRIEF           = NO
-
-# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make doxygen treat a
-# multi-line C++ special comment block (i.e. a block of //! or /// comments) as
-# a brief description. This used to be the default behavior. The new default is
-# to treat a multi-line C++ comment block as a detailed description. Set this
-# tag to YES if you prefer the old behavior instead.
-#
-# Note that setting this tag to YES also means that rational rose comments are
-# not recognized any more.
-# The default value is: NO.
-
-MULTILINE_CPP_IS_BRIEF = YES
-
-# If the INHERIT_DOCS tag is set to YES then an undocumented member inherits the
-# documentation from any documented member that it re-implements.
-# The default value is: YES.
-
-INHERIT_DOCS           = YES
-
-# If the SEPARATE_MEMBER_PAGES tag is set to YES, then doxygen will produce a
-# new page for each member. If set to NO, the documentation of a member will be
-# part of the file/class/namespace that contains it.
-# The default value is: NO.
-
-SEPARATE_MEMBER_PAGES  = YES
-
-# The TAB_SIZE tag can be used to set the number of spaces in a tab. Doxygen
-# uses this value to replace tabs by spaces in code fragments.
-# Minimum value: 1, maximum value: 16, default value: 4.
-
-TAB_SIZE               = 1
-
-# This tag can be used to specify a number of aliases that act as commands in
-# the documentation. An alias has the form:
-# name=value
-# For example adding
-# "sideeffect=@par Side Effects:\n"
-# will allow you to put the command \sideeffect (or @sideeffect) in the
-# documentation, which will result in a user-defined paragraph with heading
-# "Side Effects:". You can put \n's in the value part of an alias to insert
-# newlines.
-
-ALIASES                = 
-
-# This tag can be used to specify a number of word-keyword mappings (TCL only).
-# A mapping has the form "name=value". For example adding "class=itcl::class"
-# will allow you to use the command class in the itcl::class meaning.
-
-TCL_SUBST              = 
-
-# Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C sources
-# only. Doxygen will then generate output that is more tailored for C. For
-# instance, some of the names that are used will be different. The list of all
-# members will be omitted, etc.
-# The default value is: NO.
-
-OPTIMIZE_OUTPUT_FOR_C  = NO
-
-# Set the OPTIMIZE_OUTPUT_JAVA tag to YES if your project consists of Java or
-# Python sources only. Doxygen will then generate output that is more tailored
-# for that language. For instance, namespaces will be presented as packages,
-# qualified scopes will look different, etc.
-# The default value is: NO.
-
-OPTIMIZE_OUTPUT_JAVA   = NO
-
-# Set the OPTIMIZE_FOR_FORTRAN tag to YES if your project consists of Fortran
-# sources. Doxygen will then generate output that is tailored for Fortran.
-# The default value is: NO.
-
-OPTIMIZE_FOR_FORTRAN   = NO
-
-# Set the OPTIMIZE_OUTPUT_VHDL tag to YES if your project consists of VHDL
-# sources. Doxygen will then generate output that is tailored for VHDL.
-# The default value is: NO.
-
-OPTIMIZE_OUTPUT_VHDL   = NO
-
-# Doxygen selects the parser to use depending on the extension of the files it
-# parses. With this tag you can assign which parser to use for a given
-# extension. Doxygen has a built-in mapping, but you can override or extend it
-# using this tag. The format is ext=language, where ext is a file extension, and
-# language is one of the parsers supported by doxygen: IDL, Java, Javascript,
-# C#, C, C++, D, PHP, Objective-C, Python, Fortran, VHDL. For instance to make
-# doxygen treat .inc files as Fortran files (default is PHP), and .f files as C
-# (default is Fortran), use: inc=Fortran f=C.
-#
-# Note For files without extension you can use no_extension as a placeholder.
-#
-# Note that for custom extensions you also need to set FILE_PATTERNS otherwise
-# the files are not read by doxygen.
-
-EXTENSION_MAPPING      = 
-
-# If the MARKDOWN_SUPPORT tag is enabled then doxygen pre-processes all comments
-# according to the Markdown format, which allows for more readable
-# documentation. See http://daringfireball.net/projects/markdown/ for details.
-# The output of markdown processing is further processed by doxygen, so you can
-# mix doxygen, HTML, and XML commands with Markdown formatting. Disable only in
-# case of backward compatibilities issues.
-# The default value is: YES.
-
-MARKDOWN_SUPPORT       = YES
-
-# When enabled doxygen tries to link words that correspond to documented
-# classes, or namespaces to their corresponding documentation. Such a link can
-# be prevented in individual cases by by putting a % sign in front of the word
-# or globally by setting AUTOLINK_SUPPORT to NO.
-# The default value is: YES.
-
-AUTOLINK_SUPPORT       = YES
-
-# If you use STL classes (i.e. std::string, std::vector, etc.) but do not want
-# to include (a tag file for) the STL sources as input, then you should set this
-# tag to YES in order to let doxygen match functions declarations and
-# definitions whose arguments contain STL classes (e.g. func(std::string);
-# versus func(std::string) {}). This also make the inheritance and collaboration
-# diagrams that involve STL classes more complete and accurate.
-# The default value is: NO.
-
-BUILTIN_STL_SUPPORT    = NO
-
-# If you use Microsoft's C++/CLI language, you should set this option to YES to
-# enable parsing support.
-# The default value is: NO.
-
-CPP_CLI_SUPPORT        = NO
-
-# Set the SIP_SUPPORT tag to YES if your project consists of sip (see:
-# http://www.riverbankcomputing.co.uk/software/sip/intro) sources only. Doxygen
-# will parse them like normal C++ but will assume all classes use public instead
-# of private inheritance when no explicit protection keyword is present.
-# The default value is: NO.
-
-SIP_SUPPORT            = YES
-
-# For Microsoft's IDL there are propget and propput attributes to indicate
-# getter and setter methods for a property. Setting this option to YES will make
-# doxygen to replace the get and set methods by a property in the documentation.
-# This will only work if the methods are indeed getting or setting a simple
-# type. If this is not the case, or you want to show the methods anyway, you
-# should set this option to NO.
-# The default value is: YES.
-
-IDL_PROPERTY_SUPPORT   = YES
-
-# If member grouping is used in the documentation and the DISTRIBUTE_GROUP_DOC
-# tag is set to YES, then doxygen will reuse the documentation of the first
-# member in the group (if any) for the other members of the group. By default
-# all members of a group must be documented explicitly.
-# The default value is: NO.
-
-DISTRIBUTE_GROUP_DOC   = YES
-
-# Set the SUBGROUPING tag to YES to allow class member groups of the same type
-# (for instance a group of public functions) to be put as a subgroup of that
-# type (e.g. under the Public Functions section). Set it to NO to prevent
-# subgrouping. Alternatively, this can be done per class using the
-# \nosubgrouping command.
-# The default value is: YES.
-
-SUBGROUPING            = YES
-
-# When the INLINE_GROUPED_CLASSES tag is set to YES, classes, structs and unions
-# are shown inside the group in which they are included (e.g. using \ingroup)
-# instead of on a separate page (for HTML and Man pages) or section (for LaTeX
-# and RTF).
-#
-# Note that this feature does not work in combination with
-# SEPARATE_MEMBER_PAGES.
-# The default value is: NO.
-
-INLINE_GROUPED_CLASSES = YES
-
-# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and unions
-# with only public data fields or simple typedef fields will be shown inline in
-# the documentation of the scope in which they are defined (i.e. file,
-# namespace, or group documentation), provided this scope is documented. If set
-# to NO, structs, classes, and unions are shown on a separate page (for HTML and
-# Man pages) or section (for LaTeX and RTF).
-# The default value is: NO.
-
-INLINE_SIMPLE_STRUCTS  = YES
-
-# When TYPEDEF_HIDES_STRUCT tag is enabled, a typedef of a struct, union, or
-# enum is documented as struct, union, or enum with the name of the typedef. So
-# typedef struct TypeS {} TypeT, will appear in the documentation as a struct
-# with name TypeT. When disabled the typedef will appear as a member of a file,
-# namespace, or class. And the struct will be named TypeS. This can typically be
-# useful for C code in case the coding convention dictates that all compound
-# types are typedef'ed and only the typedef is referenced, never the tag name.
-# The default value is: NO.
-
-TYPEDEF_HIDES_STRUCT   = YES
-
-# The size of the symbol lookup cache can be set using LOOKUP_CACHE_SIZE. This
-# cache is used to resolve symbols given their name and scope. Since this can be
-# an expensive process and often the same symbol appears multiple times in the
-# code, doxygen keeps a cache of pre-resolved symbols. If the cache is too small
-# doxygen will become slower. If the cache is too large, memory is wasted. The
-# cache size is given by this formula: 2^(16+LOOKUP_CACHE_SIZE). The valid range
-# is 0..9, the default is 0, corresponding to a cache size of 2^16=65536
-# symbols. At the end of a run doxygen will report the cache usage and suggest
-# the optimal cache size from a speed point of view.
-# Minimum value: 0, maximum value: 9, default value: 0.
-
-LOOKUP_CACHE_SIZE      = 0
-
-#---------------------------------------------------------------------------
-# Build related configuration options
-#---------------------------------------------------------------------------
-
-# If the EXTRACT_ALL tag is set to YES doxygen will assume all entities in
-# documentation are documented, even if no documentation was available. Private
-# class members and static file members will be hidden unless the
-# EXTRACT_PRIVATE respectively EXTRACT_STATIC tags are set to YES.
-# Note: This will also disable the warnings about undocumented members that are
-# normally produced when WARNINGS is set to YES.
-# The default value is: NO.
-
-EXTRACT_ALL            = YES
-
-# If the EXTRACT_PRIVATE tag is set to YES all private members of a class will
-# be included in the documentation.
-# The default value is: NO.
-
-EXTRACT_PRIVATE        = YES
-
-# If the EXTRACT_PACKAGE tag is set to YES all members with package or internal
-# scope will be included in the documentation.
-# The default value is: NO.
-
-EXTRACT_PACKAGE        = YES
-
-# If the EXTRACT_STATIC tag is set to YES all static members of a file will be
-# included in the documentation.
-# The default value is: NO.
-
-EXTRACT_STATIC         = YES
-
-# If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs) defined
-# locally in source files will be included in the documentation. If set to NO
-# only classes defined in header files are included. Does not have any effect
-# for Java sources.
-# The default value is: YES.
-
-EXTRACT_LOCAL_CLASSES  = YES
-
-# This flag is only useful for Objective-C code. When set to YES local methods,
-# which are defined in the implementation section but not in the interface are
-# included in the documentation. If set to NO only methods in the interface are
-# included.
-# The default value is: NO.
-
-EXTRACT_LOCAL_METHODS  = YES
-
-# If this flag is set to YES, the members of anonymous namespaces will be
-# extracted and appear in the documentation as a namespace called
-# 'anonymous_namespace{file}', where file will be replaced with the base name of
-# the file that contains the anonymous namespace. By default anonymous namespace
-# are hidden.
-# The default value is: NO.
-
-EXTRACT_ANON_NSPACES   = YES
-
-# If the HIDE_UNDOC_MEMBERS tag is set to YES, doxygen will hide all
-# undocumented members inside documented classes or files. If set to NO these
-# members will be included in the various overviews, but no documentation
-# section is generated. This option has no effect if EXTRACT_ALL is enabled.
-# The default value is: NO.
-
-HIDE_UNDOC_MEMBERS     = NO
-
-# If the HIDE_UNDOC_CLASSES tag is set to YES, doxygen will hide all
-# undocumented classes that are normally visible in the class hierarchy. If set
-# to NO these classes will be included in the various overviews. This option has
-# no effect if EXTRACT_ALL is enabled.
-# The default value is: NO.
-
-HIDE_UNDOC_CLASSES     = NO
-
-# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, doxygen will hide all friend
-# (class|struct|union) declarations. If set to NO these declarations will be
-# included in the documentation.
-# The default value is: NO.
-
-HIDE_FRIEND_COMPOUNDS  = NO
-
-# If the HIDE_IN_BODY_DOCS tag is set to YES, doxygen will hide any
-# documentation blocks found inside the body of a function. If set to NO these
-# blocks will be appended to the function's detailed documentation block.
-# The default value is: NO.
-
-HIDE_IN_BODY_DOCS      = NO
-
-# The INTERNAL_DOCS tag determines if documentation that is typed after a
-# \internal command is included. If the tag is set to NO then the documentation
-# will be excluded. Set it to YES to include the internal documentation.
-# The default value is: NO.
-
-INTERNAL_DOCS          = NO
-
-# If the CASE_SENSE_NAMES tag is set to NO then doxygen will only generate file
-# names in lower-case letters. If set to YES upper-case letters are also
-# allowed. This is useful if you have classes or files whose names only differ
-# in case and if your file system supports case sensitive file names. Windows
-# and Mac users are advised to set this option to NO.
-# The default value is: system dependent.
-
-CASE_SENSE_NAMES       = YES
-
-# If the HIDE_SCOPE_NAMES tag is set to NO then doxygen will show members with
-# their full class and namespace scopes in the documentation. If set to YES the
-# scope will be hidden.
-# The default value is: NO.
-
-HIDE_SCOPE_NAMES       = NO
-
-# If the SHOW_INCLUDE_FILES tag is set to YES then doxygen will put a list of
-# the files that are included by a file in the documentation of that file.
-# The default value is: YES.
-
-SHOW_INCLUDE_FILES     = YES
-
-# If the SHOW_GROUPED_MEMB_INC tag is set to YES then Doxygen will add for each
-# grouped member an include statement to the documentation, telling the reader
-# which file to include in order to use the member.
-# The default value is: NO.
-
-SHOW_GROUPED_MEMB_INC  = NO
-
-# If the FORCE_LOCAL_INCLUDES tag is set to YES then doxygen will list include
-# files with double quotes in the documentation rather than with sharp brackets.
-# The default value is: NO.
-
-FORCE_LOCAL_INCLUDES   = YES
-
-# If the INLINE_INFO tag is set to YES then a tag [inline] is inserted in the
-# documentation for inline members.
-# The default value is: YES.
-
-INLINE_INFO            = YES
-
-# If the SORT_MEMBER_DOCS tag is set to YES then doxygen will sort the
-# (detailed) documentation of file and class members alphabetically by member
-# name. If set to NO the members will appear in declaration order.
-# The default value is: YES.
-
-SORT_MEMBER_DOCS       = YES
-
-# If the SORT_BRIEF_DOCS tag is set to YES then doxygen will sort the brief
-# descriptions of file, namespace and class members alphabetically by member
-# name. If set to NO the members will appear in declaration order. Note that
-# this will also influence the order of the classes in the class list.
-# The default value is: NO.
-
-SORT_BRIEF_DOCS        = NO
-
-# If the SORT_MEMBERS_CTORS_1ST tag is set to YES then doxygen will sort the
-# (brief and detailed) documentation of class members so that constructors and
-# destructors are listed first. If set to NO the constructors will appear in the
-# respective orders defined by SORT_BRIEF_DOCS and SORT_MEMBER_DOCS.
-# Note: If SORT_BRIEF_DOCS is set to NO this option is ignored for sorting brief
-# member documentation.
-# Note: If SORT_MEMBER_DOCS is set to NO this option is ignored for sorting
-# detailed member documentation.
-# The default value is: NO.
-
-SORT_MEMBERS_CTORS_1ST = NO
-
-# If the SORT_GROUP_NAMES tag is set to YES then doxygen will sort the hierarchy
-# of group names into alphabetical order. If set to NO the group names will
-# appear in their defined order.
-# The default value is: NO.
-
-SORT_GROUP_NAMES       = NO
-
-# If the SORT_BY_SCOPE_NAME tag is set to YES, the class list will be sorted by
-# fully-qualified names, including namespaces. If set to NO, the class list will
-# be sorted only by class name, not including the namespace part.
-# Note: This option is not very useful if HIDE_SCOPE_NAMES is set to YES.
-# Note: This option applies only to the class list, not to the alphabetical
-# list.
-# The default value is: NO.
-
-SORT_BY_SCOPE_NAME     = NO
-
-# If the STRICT_PROTO_MATCHING option is enabled and doxygen fails to do proper
-# type resolution of all parameters of a function it will reject a match between
-# the prototype and the implementation of a member function even if there is
-# only one candidate or it is obvious which candidate to choose by doing a
-# simple string match. By disabling STRICT_PROTO_MATCHING doxygen will still
-# accept a match between prototype and implementation in such cases.
-# The default value is: NO.
-
-STRICT_PROTO_MATCHING  = NO
-
-# The GENERATE_TODOLIST tag can be used to enable ( YES) or disable ( NO) the
-# todo list. This list is created by putting \todo commands in the
-# documentation.
-# The default value is: YES.
-
-GENERATE_TODOLIST      = YES
-
-# The GENERATE_TESTLIST tag can be used to enable ( YES) or disable ( NO) the
-# test list. This list is created by putting \test commands in the
-# documentation.
-# The default value is: YES.
-
-GENERATE_TESTLIST      = YES
-
-# The GENERATE_BUGLIST tag can be used to enable ( YES) or disable ( NO) the bug
-# list. This list is created by putting \bug commands in the documentation.
-# The default value is: YES.
-
-GENERATE_BUGLIST       = YES
-
-# The GENERATE_DEPRECATEDLIST tag can be used to enable ( YES) or disable ( NO)
-# the deprecated list. This list is created by putting \deprecated commands in
-# the documentation.
-# The default value is: YES.
-
-GENERATE_DEPRECATEDLIST= YES
-
-# The ENABLED_SECTIONS tag can be used to enable conditional documentation
-# sections, marked by \if <section_label> ... \endif and \cond <section_label>
-# ... \endcond blocks.
-
-ENABLED_SECTIONS       = 
-
-# The MAX_INITIALIZER_LINES tag determines the maximum number of lines that the
-# initial value of a variable or macro / define can have for it to appear in the
-# documentation. If the initializer consists of more lines than specified here
-# it will be hidden. Use a value of 0 to hide initializers completely. The
-# appearance of the value of individual variables and macros / defines can be
-# controlled using \showinitializer or \hideinitializer command in the
-# documentation regardless of this setting.
-# Minimum value: 0, maximum value: 10000, default value: 30.
-
-MAX_INITIALIZER_LINES  = 30
-
-# Set the SHOW_USED_FILES tag to NO to disable the list of files generated at
-# the bottom of the documentation of classes and structs. If set to YES the list
-# will mention the files that were used to generate the documentation.
-# The default value is: YES.
-
-SHOW_USED_FILES        = YES
-
-# Set the SHOW_FILES tag to NO to disable the generation of the Files page. This
-# will remove the Files entry from the Quick Index and from the Folder Tree View
-# (if specified).
-# The default value is: YES.
-
-SHOW_FILES             = YES
-
-# Set the SHOW_NAMESPACES tag to NO to disable the generation of the Namespaces
-# page. This will remove the Namespaces entry from the Quick Index and from the
-# Folder Tree View (if specified).
-# The default value is: YES.
-
-SHOW_NAMESPACES        = YES
-
-# The FILE_VERSION_FILTER tag can be used to specify a program or script that
-# doxygen should invoke to get the current version for each file (typically from
-# the version control system). Doxygen will invoke the program by executing (via
-# popen()) the command command input-file, where command is the value of the
-# FILE_VERSION_FILTER tag, and input-file is the name of an input file provided
-# by doxygen. Whatever the program writes to standard output is used as the file
-# version. For an example see the documentation.
-
-FILE_VERSION_FILTER    = 
-
-# The LAYOUT_FILE tag can be used to specify a layout file which will be parsed
-# by doxygen. The layout file controls the global structure of the generated
-# output files in an output format independent way. To create the layout file
-# that represents doxygen's defaults, run doxygen with the -l option. You can
-# optionally specify a file name after the option, if omitted DoxygenLayout.xml
-# will be used as the name of the layout file.
-#
-# Note that if you run doxygen from a directory containing a file called
-# DoxygenLayout.xml, doxygen will parse it automatically even if the LAYOUT_FILE
-# tag is left empty.
-
-LAYOUT_FILE            = 
-
-# The CITE_BIB_FILES tag can be used to specify one or more bib files containing
-# the reference definitions. This must be a list of .bib files. The .bib
-# extension is automatically appended if omitted. This requires the bibtex tool
-# to be installed. See also http://en.wikipedia.org/wiki/BibTeX for more info.
-# For LaTeX the style of the bibliography can be controlled using
-# LATEX_BIB_STYLE. To use this feature you need bibtex and perl available in the
-# search path. Do not use file names with spaces, bibtex cannot handle them. See
-# also \cite for info how to create references.
-
-CITE_BIB_FILES         = 
-
-#---------------------------------------------------------------------------
-# Configuration options related to warning and progress messages
-#---------------------------------------------------------------------------
-
-# The QUIET tag can be used to turn on/off the messages that are generated to
-# standard output by doxygen. If QUIET is set to YES this implies that the
-# messages are off.
-# The default value is: NO.
-
-QUIET                  = NO
-
-# The WARNINGS tag can be used to turn on/off the warning messages that are
-# generated to standard error ( stderr) by doxygen. If WARNINGS is set to YES
-# this implies that the warnings are on.
-#
-# Tip: Turn warnings on while writing the documentation.
-# The default value is: YES.
-
-WARNINGS               = YES
-
-# If the WARN_IF_UNDOCUMENTED tag is set to YES, then doxygen will generate
-# warnings for undocumented members. If EXTRACT_ALL is set to YES then this flag
-# will automatically be disabled.
-# The default value is: YES.
-
-WARN_IF_UNDOCUMENTED   = YES
-
-# If the WARN_IF_DOC_ERROR tag is set to YES, doxygen will generate warnings for
-# potential errors in the documentation, such as not documenting some parameters
-# in a documented function, or documenting parameters that don't exist or using
-# markup commands wrongly.
-# The default value is: YES.
-
-WARN_IF_DOC_ERROR      = YES
-
-# This WARN_NO_PARAMDOC option can be enabled to get warnings for functions that
-# are documented, but have no documentation for their parameters or return
-# value. If set to NO doxygen will only warn about wrong or incomplete parameter
-# documentation, but not about the absence of documentation.
-# The default value is: NO.
-
-WARN_NO_PARAMDOC       = NO
-
-# The WARN_FORMAT tag determines the format of the warning messages that doxygen
-# can produce. The string should contain the $file, $line, and $text tags, which
-# will be replaced by the file and line number from which the warning originated
-# and the warning text. Optionally the format may contain $version, which will
-# be replaced by the version of the file (if it could be obtained via
-# FILE_VERSION_FILTER)
-# The default value is: $file:$line: $text.
-
-WARN_FORMAT            = "$file:$line: $text"
-
-# The WARN_LOGFILE tag can be used to specify a file to which warning and error
-# messages should be written. If left blank the output is written to standard
-# error (stderr).
-
-WARN_LOGFILE           = 
-
-#---------------------------------------------------------------------------
-# Configuration options related to the input files
-#---------------------------------------------------------------------------
-
-# The INPUT tag is used to specify the files and/or directories that contain
-# documented source files. You may enter file names like myfile.cpp or
-# directories like /usr/src/myproject. Separate the files or directories with
-# spaces.
-# Note: If this tag is empty the current directory is searched.
-
-INPUT                  = ../../source/include \
-                         ../../source/src
-
-# This tag can be used to specify the character encoding of the source files
-# that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
-# libiconv (or the iconv built into libc) for the transcoding. See the libiconv
-# documentation (see: http://www.gnu.org/software/libiconv) for the list of
-# possible encodings.
-# The default value is: UTF-8.
-
-INPUT_ENCODING         = UTF-8
-
-# If the value of the INPUT tag contains directories, you can use the
-# FILE_PATTERNS tag to specify one or more wildcard patterns (like *.cpp and
-# *.h) to filter out the source-files in the directories. If left blank the
-# following patterns are tested:*.c, *.cc, *.cxx, *.cpp, *.c++, *.java, *.ii,
-# *.ixx, *.ipp, *.i++, *.inl, *.idl, *.ddl, *.odl, *.h, *.hh, *.hxx, *.hpp,
-# *.h++, *.cs, *.d, *.php, *.php4, *.php5, *.phtml, *.inc, *.m, *.markdown,
-# *.md, *.mm, *.dox, *.py, *.f90, *.f, *.for, *.tcl, *.vhd, *.vhdl, *.ucf,
-# *.qsf, *.as and *.js.
-
-FILE_PATTERNS          = *.c \
-                         *.cc \
-                         *.cxx \
-                         *.cpp \
-                         *.c++ \
-                         *.d \
-                         *.java \
-                         *.ii \
-                         *.ixx \
-                         *.ipp \
-                         *.i++ \
-                         *.inl \
-                         *.h \
-                         *.hh \
-                         *.hxx \
-                         *.hpp \
-                         *.h++ \
-                         *.idl \
-                         *.odl \
-                         *.cs \
-                         *.php \
-                         *.php3 \
-                         *.inc \
-                         *.m \
-                         *.mm \
-                         *.dox \
-                         *.py \
-                         *.f90 \
-                         *.f \
-                         *.for \
-                         *.vhd \
-                         *.vhdl
-
-# The RECURSIVE tag can be used to specify whether or not subdirectories should
-# be searched for input files as well.
-# The default value is: NO.
-
-RECURSIVE              = YES
-
-# The EXCLUDE tag can be used to specify files and/or directories that should be
-# excluded from the INPUT source files. This way you can easily exclude a
-# subdirectory from a directory tree whose root is specified with the INPUT tag.
-#
-# Note that relative paths are relative to the directory from which doxygen is
-# run.
-
-EXCLUDE                = 
-
-# The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
-# directories that are symbolic links (a Unix file system feature) are excluded
-# from the input.
-# The default value is: NO.
-
-EXCLUDE_SYMLINKS       = NO
-
-# If the value of the INPUT tag contains directories, you can use the
-# EXCLUDE_PATTERNS tag to specify one or more wildcard patterns to exclude
-# certain files from those directories.
-#
-# Note that the wildcards are matched against the file with absolute path, so to
-# exclude all test directories for example use the pattern */test/*
-
-EXCLUDE_PATTERNS       = *Dict.*
-
-# The EXCLUDE_SYMBOLS tag can be used to specify one or more symbol names
-# (namespaces, classes, functions, etc.) that should be excluded from the
-# output. The symbol name can be a fully qualified name, a word, or if the
-# wildcard * is used, a substring. Examples: ANamespace, AClass,
-# AClass::ANamespace, ANamespace::*Test
-#
-# Note that the wildcards are matched against the file with absolute path, so to
-# exclude all test directories use the pattern */test/*
-
-EXCLUDE_SYMBOLS        = 
-
-# The EXAMPLE_PATH tag can be used to specify one or more files or directories
-# that contain example code fragments that are included (see the \include
-# command).
-
-EXAMPLE_PATH           = 
-
-# If the value of the EXAMPLE_PATH tag contains directories, you can use the
-# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp and
-# *.h) to filter out the source-files in the directories. If left blank all
-# files are included.
-
-EXAMPLE_PATTERNS       = *
-
-# If the EXAMPLE_RECURSIVE tag is set to YES then subdirectories will be
-# searched for input files to be used with the \include or \dontinclude commands
-# irrespective of the value of the RECURSIVE tag.
-# The default value is: NO.
-
-EXAMPLE_RECURSIVE      = NO
-
-# The IMAGE_PATH tag can be used to specify one or more files or directories
-# that contain images that are to be included in the documentation (see the
-# \image command).
-
-IMAGE_PATH             = 
-
-# The INPUT_FILTER tag can be used to specify a program that doxygen should
-# invoke to filter for each input file. Doxygen will invoke the filter program
-# by executing (via popen()) the command:
-#
-# <filter> <input-file>
-#
-# where <filter> is the value of the INPUT_FILTER tag, and <input-file> is the
-# name of an input file. Doxygen will then use the output that the filter
-# program writes to standard output. If FILTER_PATTERNS is specified, this tag
-# will be ignored.
-#
-# Note that the filter must not add or remove lines; it is applied before the
-# code is scanned, but not when the output code is generated. If lines are added
-# or removed, the anchors will not be placed correctly.
-
-INPUT_FILTER           = 
-
-# The FILTER_PATTERNS tag can be used to specify filters on a per file pattern
-# basis. Doxygen will compare the file name with each pattern and apply the
-# filter if there is a match. The filters are a list of the form: pattern=filter
-# (like *.cpp=my_cpp_filter). See INPUT_FILTER for further information on how
-# filters are used. If the FILTER_PATTERNS tag is empty or if none of the
-# patterns match the file name, INPUT_FILTER is applied.
-
-FILTER_PATTERNS        = 
-
-# If the FILTER_SOURCE_FILES tag is set to YES, the input filter (if set using
-# INPUT_FILTER ) will also be used to filter the input files that are used for
-# producing the source files to browse (i.e. when SOURCE_BROWSER is set to YES).
-# The default value is: NO.
-
-FILTER_SOURCE_FILES    = NO
-
-# The FILTER_SOURCE_PATTERNS tag can be used to specify source filters per file
-# pattern. A pattern will override the setting for FILTER_PATTERN (if any) and
-# it is also possible to disable source filtering for a specific pattern using
-# *.ext= (so without naming a filter).
-# This tag requires that the tag FILTER_SOURCE_FILES is set to YES.
-
-FILTER_SOURCE_PATTERNS = 
-
-# If the USE_MDFILE_AS_MAINPAGE tag refers to the name of a markdown file that
-# is part of the input, its contents will be placed on the main page
-# (index.html). This can be useful if you have a project on for instance GitHub
-# and want to reuse the introduction page also for the doxygen output.
-
-USE_MDFILE_AS_MAINPAGE = 
-
-#---------------------------------------------------------------------------
-# Configuration options related to source browsing
-#---------------------------------------------------------------------------
-
-# If the SOURCE_BROWSER tag is set to YES then a list of source files will be
-# generated. Documented entities will be cross-referenced with these sources.
-#
-# Note: To get rid of all source code in the generated output, make sure that
-# also VERBATIM_HEADERS is set to NO.
-# The default value is: NO.
-
-SOURCE_BROWSER         = YES
-
-# Setting the INLINE_SOURCES tag to YES will include the body of functions,
-# classes and enums directly into the documentation.
-# The default value is: NO.
-
-INLINE_SOURCES         = YES
-
-# Setting the STRIP_CODE_COMMENTS tag to YES will instruct doxygen to hide any
-# special comment blocks from generated source code fragments. Normal C, C++ and
-# Fortran comments will always remain visible.
-# The default value is: YES.
-
-STRIP_CODE_COMMENTS    = NO
-
-# If the REFERENCED_BY_RELATION tag is set to YES then for each documented
-# function all documented functions referencing it will be listed.
-# The default value is: NO.
-
-REFERENCED_BY_RELATION = YES
-
-# If the REFERENCES_RELATION tag is set to YES then for each documented function
-# all documented entities called/used by that function will be listed.
-# The default value is: NO.
-
-REFERENCES_RELATION    = YES
-
-# If the REFERENCES_LINK_SOURCE tag is set to YES and SOURCE_BROWSER tag is set
-# to YES, then the hyperlinks from functions in REFERENCES_RELATION and
-# REFERENCED_BY_RELATION lists will link to the source code. Otherwise they will
-# link to the documentation.
-# The default value is: YES.
-
-REFERENCES_LINK_SOURCE = YES
-
-# If SOURCE_TOOLTIPS is enabled (the default) then hovering a hyperlink in the
-# source code will show a tooltip with additional information such as prototype,
-# brief description and links to the definition and documentation. Since this
-# will make the HTML file larger and loading of large files a bit slower, you
-# can opt to disable this feature.
-# The default value is: YES.
-# This tag requires that the tag SOURCE_BROWSER is set to YES.
-
-SOURCE_TOOLTIPS        = YES
-
-# If the USE_HTAGS tag is set to YES then the references to source code will
-# point to the HTML generated by the htags(1) tool instead of doxygen built-in
-# source browser. The htags tool is part of GNU's global source tagging system
-# (see http://www.gnu.org/software/global/global.html). You will need version
-# 4.8.6 or higher.
-#
-# To use it do the following:
-# - Install the latest version of global
-# - Enable SOURCE_BROWSER and USE_HTAGS in the config file
-# - Make sure the INPUT points to the root of the source tree
-# - Run doxygen as normal
-#
-# Doxygen will invoke htags (and that will in turn invoke gtags), so these
-# tools must be available from the command line (i.e. in the search path).
-#
-# The result: instead of the source browser generated by doxygen, the links to
-# source code will now point to the output of htags.
-# The default value is: NO.
-# This tag requires that the tag SOURCE_BROWSER is set to YES.
-
-USE_HTAGS              = YES
-
-# If the VERBATIM_HEADERS tag is set the YES then doxygen will generate a
-# verbatim copy of the header file for each class for which an include is
-# specified. Set to NO to disable this.
-# See also: Section \class.
-# The default value is: YES.
-
-VERBATIM_HEADERS       = YES
-
-# If the CLANG_ASSISTED_PARSING tag is set to YES, then doxygen will use the
-# clang parser (see: http://clang.llvm.org/) for more acurate parsing at the
-# cost of reduced performance. This can be particularly helpful with template
-# rich C++ code for which doxygen's built-in parser lacks the necessary type
-# information.
-# Note: The availability of this option depends on whether or not doxygen was
-# compiled with the --with-libclang option.
-# The default value is: NO.
-
-CLANG_ASSISTED_PARSING = NO
-
-# If clang assisted parsing is enabled you can provide the compiler with command
-# line options that you would normally use when invoking the compiler. Note that
-# the include paths will already be set by doxygen for the files and directories
-# specified with INPUT and INCLUDE_PATH.
-# This tag requires that the tag CLANG_ASSISTED_PARSING is set to YES.
-
-CLANG_OPTIONS          = 
-
-#---------------------------------------------------------------------------
-# Configuration options related to the alphabetical class index
-#---------------------------------------------------------------------------
-
-# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index of all
-# compounds will be generated. Enable this if the project contains a lot of
-# classes, structs, unions or interfaces.
-# The default value is: YES.
-
-ALPHABETICAL_INDEX     = YES
-
-# The COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns in
-# which the alphabetical index list will be split.
-# Minimum value: 1, maximum value: 20, default value: 5.
-# This tag requires that the tag ALPHABETICAL_INDEX is set to YES.
-
-COLS_IN_ALPHA_INDEX    = 5
-
-# In case all classes in a project start with a common prefix, all classes will
-# be put under the same header in the alphabetical index. The IGNORE_PREFIX tag
-# can be used to specify a prefix (or a list of prefixes) that should be ignored
-# while generating the index headers.
-# This tag requires that the tag ALPHABETICAL_INDEX is set to YES.
-
-IGNORE_PREFIX          = 
-
-#---------------------------------------------------------------------------
-# Configuration options related to the HTML output
-#---------------------------------------------------------------------------
-
-# If the GENERATE_HTML tag is set to YES doxygen will generate HTML output
-# The default value is: YES.
-
-GENERATE_HTML          = YES
-
-# The HTML_OUTPUT tag is used to specify where the HTML docs will be put. If a
-# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-# it.
-# The default directory is: html.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_OUTPUT            = html
-
-# The HTML_FILE_EXTENSION tag can be used to specify the file extension for each
-# generated HTML page (for example: .htm, .php, .asp).
-# The default value is: .html.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_FILE_EXTENSION    = .html
-
-# The HTML_HEADER tag can be used to specify a user-defined HTML header file for
-# each generated HTML page. If the tag is left blank doxygen will generate a
-# standard header.
-#
-# To get valid HTML the header file that includes any scripts and style sheets
-# that doxygen needs, which is dependent on the configuration options used (e.g.
-# the setting GENERATE_TREEVIEW). It is highly recommended to start with a
-# default header using
-# doxygen -w html new_header.html new_footer.html new_stylesheet.css
-# YourConfigFile
-# and then modify the file new_header.html. See also section "Doxygen usage"
-# for information on how to generate the default header that doxygen normally
-# uses.
-# Note: The header is subject to change so you typically have to regenerate the
-# default header when upgrading to a newer version of doxygen. For a description
-# of the possible markers and block names see the documentation.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_HEADER            = 
-
-# The HTML_FOOTER tag can be used to specify a user-defined HTML footer for each
-# generated HTML page. If the tag is left blank doxygen will generate a standard
-# footer. See HTML_HEADER for more information on how to generate a default
-# footer and what special commands can be used inside the footer. See also
-# section "Doxygen usage" for information on how to generate the default footer
-# that doxygen normally uses.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_FOOTER            = 
-
-# The HTML_STYLESHEET tag can be used to specify a user-defined cascading style
-# sheet that is used by each HTML page. It can be used to fine-tune the look of
-# the HTML output. If left blank doxygen will generate a default style sheet.
-# See also section "Doxygen usage" for information on how to generate the style
-# sheet that doxygen normally uses.
-# Note: It is recommended to use HTML_EXTRA_STYLESHEET instead of this tag, as
-# it is more robust and this tag (HTML_STYLESHEET) will in the future become
-# obsolete.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_STYLESHEET        = 
-
-# The HTML_EXTRA_STYLESHEET tag can be used to specify an additional user-
-# defined cascading style sheet that is included after the standard style sheets
-# created by doxygen. Using this option one can overrule certain style aspects.
-# This is preferred over using HTML_STYLESHEET since it does not replace the
-# standard style sheet and is therefor more robust against future updates.
-# Doxygen will copy the style sheet file to the output directory. For an example
-# see the documentation.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_EXTRA_STYLESHEET  = 
-
-# The HTML_EXTRA_FILES tag can be used to specify one or more extra images or
-# other source files which should be copied to the HTML output directory. Note
-# that these files will be copied to the base HTML output directory. Use the
-# $relpath^ marker in the HTML_HEADER and/or HTML_FOOTER files to load these
-# files. In the HTML_STYLESHEET file, use the file name only. Also note that the
-# files will be copied as-is; there are no commands or markers available.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_EXTRA_FILES       = 
-
-# The HTML_COLORSTYLE_HUE tag controls the color of the HTML output. Doxygen
-# will adjust the colors in the stylesheet and background images according to
-# this color. Hue is specified as an angle on a colorwheel, see
-# http://en.wikipedia.org/wiki/Hue for more information. For instance the value
-# 0 represents red, 60 is yellow, 120 is green, 180 is cyan, 240 is blue, 300
-# purple, and 360 is red again.
-# Minimum value: 0, maximum value: 359, default value: 220.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_COLORSTYLE_HUE    = 20
-
-# The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of the colors
-# in the HTML output. For a value of 0 the output will use grayscales only. A
-# value of 255 will produce the most vivid colors.
-# Minimum value: 0, maximum value: 255, default value: 100.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_COLORSTYLE_SAT    = 62
-
-# The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to the
-# luminance component of the colors in the HTML output. Values below 100
-# gradually make the output lighter, whereas values above 100 make the output
-# darker. The value divided by 100 is the actual gamma applied, so 80 represents
-# a gamma of 0.8, The value 220 represents a gamma of 2.2, and 100 does not
-# change the gamma.
-# Minimum value: 40, maximum value: 240, default value: 80.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_COLORSTYLE_GAMMA  = 118
-
-# If the HTML_TIMESTAMP tag is set to YES then the footer of each generated HTML
-# page will contain the date and time when the page was generated. Setting this
-# to NO can help when comparing the output of multiple runs.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_TIMESTAMP         = YES
-
-# If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML
-# documentation will contain sections that can be hidden and shown after the
-# page has loaded.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_DYNAMIC_SECTIONS  = YES
-
-# With HTML_INDEX_NUM_ENTRIES one can control the preferred number of entries
-# shown in the various tree structured indices initially; the user can expand
-# and collapse entries dynamically later on. Doxygen will expand the tree to
-# such a level that at most the specified number of entries are visible (unless
-# a fully collapsed tree already exceeds this amount). So setting the number of
-# entries 1 will produce a full collapsed tree by default. 0 is a special value
-# representing an infinite number of entries and will result in a full expanded
-# tree by default.
-# Minimum value: 0, maximum value: 9999, default value: 100.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_INDEX_NUM_ENTRIES = 100
-
-# If the GENERATE_DOCSET tag is set to YES, additional index files will be
-# generated that can be used as input for Apple's Xcode 3 integrated development
-# environment (see: http://developer.apple.com/tools/xcode/), introduced with
-# OSX 10.5 (Leopard). To create a documentation set, doxygen will generate a
-# Makefile in the HTML output directory. Running make will produce the docset in
-# that directory and running make install will install the docset in
-# ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find it at
-# startup. See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html
-# for more information.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-GENERATE_DOCSET        = YES
-
-# This tag determines the name of the docset feed. A documentation feed provides
-# an umbrella under which multiple documentation sets from a single provider
-# (such as a company or product suite) can be grouped.
-# The default value is: Doxygen generated docs.
-# This tag requires that the tag GENERATE_DOCSET is set to YES.
-
-DOCSET_FEEDNAME        = "Doxygen generated docs"
-
-# This tag specifies a string that should uniquely identify the documentation
-# set bundle. This should be a reverse domain-name style string, e.g.
-# com.mycompany.MyDocSet. Doxygen will append .docset to the name.
-# The default value is: org.doxygen.Project.
-# This tag requires that the tag GENERATE_DOCSET is set to YES.
-
-DOCSET_BUNDLE_ID       = org.doxygen.Project
-
-# The DOCSET_PUBLISHER_ID tag specifies a string that should uniquely identify
-# the documentation publisher. This should be a reverse domain-name style
-# string, e.g. com.mycompany.MyDocSet.documentation.
-# The default value is: org.doxygen.Publisher.
-# This tag requires that the tag GENERATE_DOCSET is set to YES.
-
-DOCSET_PUBLISHER_ID    = org.doxygen.Publisher
-
-# The DOCSET_PUBLISHER_NAME tag identifies the documentation publisher.
-# The default value is: Publisher.
-# This tag requires that the tag GENERATE_DOCSET is set to YES.
-
-DOCSET_PUBLISHER_NAME  = Publisher
-
-# If the GENERATE_HTMLHELP tag is set to YES then doxygen generates three
-# additional HTML index files: index.hhp, index.hhc, and index.hhk. The
-# index.hhp is a project file that can be read by Microsoft's HTML Help Workshop
-# (see: http://www.microsoft.com/en-us/download/details.aspx?id=21138) on
-# Windows.
-#
-# The HTML Help Workshop contains a compiler that can convert all HTML output
-# generated by doxygen into a single compiled HTML file (.chm). Compiled HTML
-# files are now used as the Windows 98 help format, and will replace the old
-# Windows help format (.hlp) on all Windows platforms in the future. Compressed
-# HTML files also contain an index, a table of contents, and you can search for
-# words in the documentation. The HTML workshop also contains a viewer for
-# compressed HTML files.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-GENERATE_HTMLHELP      = YES
-
-# The CHM_FILE tag can be used to specify the file name of the resulting .chm
-# file. You can add a path in front of the file if the result should not be
-# written to the html output directory.
-# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
-
-CHM_FILE               = 
-
-# The HHC_LOCATION tag can be used to specify the location (absolute path
-# including file name) of the HTML help compiler ( hhc.exe). If non-empty
-# doxygen will try to run the HTML help compiler on the generated index.hhp.
-# The file has to be specified with full path.
-# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
-
-HHC_LOCATION           = 
-
-# The GENERATE_CHI flag controls if a separate .chi index file is generated (
-# YES) or that it should be included in the master .chm file ( NO).
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
-
-GENERATE_CHI           = YES
-
-# The CHM_INDEX_ENCODING is used to encode HtmlHelp index ( hhk), content ( hhc)
-# and project file content.
-# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
-
-CHM_INDEX_ENCODING     = 
-
-# The BINARY_TOC flag controls whether a binary table of contents is generated (
-# YES) or a normal table of contents ( NO) in the .chm file.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
-
-BINARY_TOC             = YES
-
-# The TOC_EXPAND flag can be set to YES to add extra items for group members to
-# the table of contents of the HTML help documentation and to the tree view.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
-
-TOC_EXPAND             = YES
-
-# If the GENERATE_QHP tag is set to YES and both QHP_NAMESPACE and
-# QHP_VIRTUAL_FOLDER are set, an additional index file will be generated that
-# can be used as input for Qt's qhelpgenerator to generate a Qt Compressed Help
-# (.qch) of the generated HTML documentation.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-GENERATE_QHP           = YES
-
-# If the QHG_LOCATION tag is specified, the QCH_FILE tag can be used to specify
-# the file name of the resulting .qch file. The path specified is relative to
-# the HTML output folder.
-# This tag requires that the tag GENERATE_QHP is set to YES.
-
-QCH_FILE               = 
-
-# The QHP_NAMESPACE tag specifies the namespace to use when generating Qt Help
-# Project output. For more information please see Qt Help Project / Namespace
-# (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#namespace).
-# The default value is: org.doxygen.Project.
-# This tag requires that the tag GENERATE_QHP is set to YES.
-
-QHP_NAMESPACE          = org.doxygen.Project
-
-# The QHP_VIRTUAL_FOLDER tag specifies the namespace to use when generating Qt
-# Help Project output. For more information please see Qt Help Project / Virtual
-# Folders (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#virtual-
-# folders).
-# The default value is: doc.
-# This tag requires that the tag GENERATE_QHP is set to YES.
-
-QHP_VIRTUAL_FOLDER     = doc
-
-# If the QHP_CUST_FILTER_NAME tag is set, it specifies the name of a custom
-# filter to add. For more information please see Qt Help Project / Custom
-# Filters (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#custom-
-# filters).
-# This tag requires that the tag GENERATE_QHP is set to YES.
-
-QHP_CUST_FILTER_NAME   = 
-
-# The QHP_CUST_FILTER_ATTRS tag specifies the list of the attributes of the
-# custom filter to add. For more information please see Qt Help Project / Custom
-# Filters (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#custom-
-# filters).
-# This tag requires that the tag GENERATE_QHP is set to YES.
-
-QHP_CUST_FILTER_ATTRS  = 
-
-# The QHP_SECT_FILTER_ATTRS tag specifies the list of the attributes this
-# project's filter section matches. Qt Help Project / Filter Attributes (see:
-# http://qt-project.org/doc/qt-4.8/qthelpproject.html#filter-attributes).
-# This tag requires that the tag GENERATE_QHP is set to YES.
-
-QHP_SECT_FILTER_ATTRS  = 
-
-# The QHG_LOCATION tag can be used to specify the location of Qt's
-# qhelpgenerator. If non-empty doxygen will try to run qhelpgenerator on the
-# generated .qhp file.
-# This tag requires that the tag GENERATE_QHP is set to YES.
-
-QHG_LOCATION           = 
-
-# If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files will be
-# generated, together with the HTML files, they form an Eclipse help plugin. To
-# install this plugin and make it available under the help contents menu in
-# Eclipse, the contents of the directory containing the HTML and XML files needs
-# to be copied into the plugins directory of eclipse. The name of the directory
-# within the plugins directory should be the same as the ECLIPSE_DOC_ID value.
-# After copying Eclipse needs to be restarted before the help appears.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-GENERATE_ECLIPSEHELP   = NO
-
-# A unique identifier for the Eclipse help plugin. When installing the plugin
-# the directory name containing the HTML and XML files should also have this
-# name. Each documentation set should have its own identifier.
-# The default value is: org.doxygen.Project.
-# This tag requires that the tag GENERATE_ECLIPSEHELP is set to YES.
-
-ECLIPSE_DOC_ID         = org.doxygen.Project
-
-# If you want full control over the layout of the generated HTML pages it might
-# be necessary to disable the index and replace it with your own. The
-# DISABLE_INDEX tag can be used to turn on/off the condensed index (tabs) at top
-# of each HTML page. A value of NO enables the index and the value YES disables
-# it. Since the tabs in the index contain the same information as the navigation
-# tree, you can set this option to YES if you also set GENERATE_TREEVIEW to YES.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-DISABLE_INDEX          = NO
-
-# The GENERATE_TREEVIEW tag is used to specify whether a tree-like index
-# structure should be generated to display hierarchical information. If the tag
-# value is set to YES, a side panel will be generated containing a tree-like
-# index structure (just like the one that is generated for HTML Help). For this
-# to work a browser that supports JavaScript, DHTML, CSS and frames is required
-# (i.e. any modern browser). Windows users are probably better off using the
-# HTML help feature. Via custom stylesheets (see HTML_EXTRA_STYLESHEET) one can
-# further fine-tune the look of the index. As an example, the default style
-# sheet generated by doxygen has an example that shows how to put an image at
-# the root of the tree instead of the PROJECT_NAME. Since the tree basically has
-# the same information as the tab index, you could consider setting
-# DISABLE_INDEX to YES when enabling this option.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-GENERATE_TREEVIEW      = NO
-
-# The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values that
-# doxygen will group on one line in the generated HTML documentation.
-#
-# Note that a value of 0 will completely suppress the enum values from appearing
-# in the overview section.
-# Minimum value: 0, maximum value: 20, default value: 4.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-ENUM_VALUES_PER_LINE   = 4
-
-# If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be used
-# to set the initial width (in pixels) of the frame in which the tree is shown.
-# Minimum value: 0, maximum value: 1500, default value: 250.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-TREEVIEW_WIDTH         = 250
-
-# When the EXT_LINKS_IN_WINDOW option is set to YES doxygen will open links to
-# external symbols imported via tag files in a separate window.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-EXT_LINKS_IN_WINDOW    = YES
-
-# Use this tag to change the font size of LaTeX formulas included as images in
-# the HTML documentation. When you change the font size after a successful
-# doxygen run you need to manually remove any form_*.png images from the HTML
-# output directory to force them to be regenerated.
-# Minimum value: 8, maximum value: 50, default value: 10.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-FORMULA_FONTSIZE       = 15
-
-# Use the FORMULA_TRANPARENT tag to determine whether or not the images
-# generated for formulas are transparent PNGs. Transparent PNGs are not
-# supported properly for IE 6.0, but are supported on all modern browsers.
-#
-# Note that when changing this option you need to delete any form_*.png files in
-# the HTML output directory before the changes have effect.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-FORMULA_TRANSPARENT    = YES
-
-# Enable the USE_MATHJAX option to render LaTeX formulas using MathJax (see
-# http://www.mathjax.org) which uses client side Javascript for the rendering
-# instead of using prerendered bitmaps. Use this if you do not have LaTeX
-# installed or if you want to formulas look prettier in the HTML output. When
-# enabled you may also need to install MathJax separately and configure the path
-# to it using the MATHJAX_RELPATH option.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-USE_MATHJAX            = NO
-
-# When MathJax is enabled you can set the default output format to be used for
-# the MathJax output. See the MathJax site (see:
-# http://docs.mathjax.org/en/latest/output.html) for more details.
-# Possible values are: HTML-CSS (which is slower, but has the best
-# compatibility), NativeMML (i.e. MathML) and SVG.
-# The default value is: HTML-CSS.
-# This tag requires that the tag USE_MATHJAX is set to YES.
-
-MATHJAX_FORMAT         = HTML-CSS
-
-# When MathJax is enabled you need to specify the location relative to the HTML
-# output directory using the MATHJAX_RELPATH option. The destination directory
-# should contain the MathJax.js script. For instance, if the mathjax directory
-# is located at the same level as the HTML output directory, then
-# MATHJAX_RELPATH should be ../mathjax. The default value points to the MathJax
-# Content Delivery Network so you can quickly see the result without installing
-# MathJax. However, it is strongly recommended to install a local copy of
-# MathJax from http://www.mathjax.org before deployment.
-# The default value is: http://cdn.mathjax.org/mathjax/latest.
-# This tag requires that the tag USE_MATHJAX is set to YES.
-
-MATHJAX_RELPATH        = http://www.mathjax.org/mathjax
-
-# The MATHJAX_EXTENSIONS tag can be used to specify one or more MathJax
-# extension names that should be enabled during MathJax rendering. For example
-# MATHJAX_EXTENSIONS = TeX/AMSmath TeX/AMSsymbols
-# This tag requires that the tag USE_MATHJAX is set to YES.
-
-MATHJAX_EXTENSIONS     = 
-
-# The MATHJAX_CODEFILE tag can be used to specify a file with javascript pieces
-# of code that will be used on startup of the MathJax code. See the MathJax site
-# (see: http://docs.mathjax.org/en/latest/output.html) for more details. For an
-# example see the documentation.
-# This tag requires that the tag USE_MATHJAX is set to YES.
-
-MATHJAX_CODEFILE       = 
-
-# When the SEARCHENGINE tag is enabled doxygen will generate a search box for
-# the HTML output. The underlying search engine uses javascript and DHTML and
-# should work on any modern browser. Note that when using HTML help
-# (GENERATE_HTMLHELP), Qt help (GENERATE_QHP), or docsets (GENERATE_DOCSET)
-# there is already a search function so this one should typically be disabled.
-# For large projects the javascript based search engine can be slow, then
-# enabling SERVER_BASED_SEARCH may provide a better solution. It is possible to
-# search using the keyboard; to jump to the search box use <access key> + S
-# (what the <access key> is depends on the OS and browser, but it is typically
-# <CTRL>, <ALT>/<option>, or both). Inside the search box use the <cursor down
-# key> to jump into the search results window, the results can be navigated
-# using the <cursor keys>. Press <Enter> to select an item or <escape> to cancel
-# the search. The filter options can be selected when the cursor is inside the
-# search box by pressing <Shift>+<cursor down>. Also here use the <cursor keys>
-# to select a filter and <Enter> or <escape> to activate or cancel the filter
-# option.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-SEARCHENGINE           = NO
-
-# When the SERVER_BASED_SEARCH tag is enabled the search engine will be
-# implemented using a web server instead of a web client using Javascript. There
-# are two flavours of web server based searching depending on the
-# EXTERNAL_SEARCH setting. When disabled, doxygen will generate a PHP script for
-# searching and an index file used by the script. When EXTERNAL_SEARCH is
-# enabled the indexing and searching needs to be provided by external tools. See
-# the section "External Indexing and Searching" for details.
-# The default value is: NO.
-# This tag requires that the tag SEARCHENGINE is set to YES.
-
-SERVER_BASED_SEARCH    = NO
-
-# When EXTERNAL_SEARCH tag is enabled doxygen will no longer generate the PHP
-# script for searching. Instead the search results are written to an XML file
-# which needs to be processed by an external indexer. Doxygen will invoke an
-# external search engine pointed to by the SEARCHENGINE_URL option to obtain the
-# search results.
-#
-# Doxygen ships with an example indexer ( doxyindexer) and search engine
-# (doxysearch.cgi) which are based on the open source search engine library
-# Xapian (see: http://xapian.org/).
-#
-# See the section "External Indexing and Searching" for details.
-# The default value is: NO.
-# This tag requires that the tag SEARCHENGINE is set to YES.
-
-EXTERNAL_SEARCH        = NO
-
-# The SEARCHENGINE_URL should point to a search engine hosted by a web server
-# which will return the search results when EXTERNAL_SEARCH is enabled.
-#
-# Doxygen ships with an example indexer ( doxyindexer) and search engine
-# (doxysearch.cgi) which are based on the open source search engine library
-# Xapian (see: http://xapian.org/). See the section "External Indexing and
-# Searching" for details.
-# This tag requires that the tag SEARCHENGINE is set to YES.
-
-SEARCHENGINE_URL       = 
-
-# When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the unindexed
-# search data is written to a file for indexing by an external tool. With the
-# SEARCHDATA_FILE tag the name of this file can be specified.
-# The default file is: searchdata.xml.
-# This tag requires that the tag SEARCHENGINE is set to YES.
-
-SEARCHDATA_FILE        = searchdata.xml
-
-# When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the
-# EXTERNAL_SEARCH_ID tag can be used as an identifier for the project. This is
-# useful in combination with EXTRA_SEARCH_MAPPINGS to search through multiple
-# projects and redirect the results back to the right project.
-# This tag requires that the tag SEARCHENGINE is set to YES.
-
-EXTERNAL_SEARCH_ID     = 
-
-# The EXTRA_SEARCH_MAPPINGS tag can be used to enable searching through doxygen
-# projects other than the one defined by this configuration file, but that are
-# all added to the same external search index. Each project needs to have a
-# unique id set via EXTERNAL_SEARCH_ID. The search mapping then maps the id of
-# to a relative location where the documentation can be found. The format is:
-# EXTRA_SEARCH_MAPPINGS = tagname1=loc1 tagname2=loc2 ...
-# This tag requires that the tag SEARCHENGINE is set to YES.
-
-EXTRA_SEARCH_MAPPINGS  = 
-
-#---------------------------------------------------------------------------
-# Configuration options related to the LaTeX output
-#---------------------------------------------------------------------------
-
-# If the GENERATE_LATEX tag is set to YES doxygen will generate LaTeX output.
-# The default value is: YES.
-
-GENERATE_LATEX         = NO
-
-# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. If a
-# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-# it.
-# The default directory is: latex.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_OUTPUT           = latex
-
-# The LATEX_CMD_NAME tag can be used to specify the LaTeX command name to be
-# invoked.
-#
-# Note that when enabling USE_PDFLATEX this option is only used for generating
-# bitmaps for formulas in the HTML output, but not in the Makefile that is
-# written to the output directory.
-# The default file is: latex.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_CMD_NAME         = latex
-
-# The MAKEINDEX_CMD_NAME tag can be used to specify the command name to generate
-# index for LaTeX.
-# The default file is: makeindex.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-MAKEINDEX_CMD_NAME     = makeindex
-
-# If the COMPACT_LATEX tag is set to YES doxygen generates more compact LaTeX
-# documents. This may be useful for small projects and may help to save some
-# trees in general.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-COMPACT_LATEX          = NO
-
-# The PAPER_TYPE tag can be used to set the paper type that is used by the
-# printer.
-# Possible values are: a4 (210 x 297 mm), letter (8.5 x 11 inches), legal (8.5 x
-# 14 inches) and executive (7.25 x 10.5 inches).
-# The default value is: a4.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-PAPER_TYPE             = a4
-
-# The EXTRA_PACKAGES tag can be used to specify one or more LaTeX package names
-# that should be included in the LaTeX output. To get the times font for
-# instance you can specify
-# EXTRA_PACKAGES=times
-# If left blank no extra packages will be included.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-EXTRA_PACKAGES         = 
-
-# The LATEX_HEADER tag can be used to specify a personal LaTeX header for the
-# generated LaTeX document. The header should contain everything until the first
-# chapter. If it is left blank doxygen will generate a standard header. See
-# section "Doxygen usage" for information on how to let doxygen write the
-# default header to a separate file.
-#
-# Note: Only use a user-defined header if you know what you are doing! The
-# following commands have a special meaning inside the header: $title,
-# $datetime, $date, $doxygenversion, $projectname, $projectnumber. Doxygen will
-# replace them by respectively the title of the page, the current date and time,
-# only the current date, the version number of doxygen, the project name (see
-# PROJECT_NAME), or the project number (see PROJECT_NUMBER).
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_HEADER           = 
-
-# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for the
-# generated LaTeX document. The footer should contain everything after the last
-# chapter. If it is left blank doxygen will generate a standard footer.
-#
-# Note: Only use a user-defined footer if you know what you are doing!
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_FOOTER           = 
-
-# The LATEX_EXTRA_FILES tag can be used to specify one or more extra images or
-# other source files which should be copied to the LATEX_OUTPUT output
-# directory. Note that the files will be copied as-is; there are no commands or
-# markers available.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_EXTRA_FILES      = 
-
-# If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated is
-# prepared for conversion to PDF (using ps2pdf or pdflatex). The PDF file will
-# contain links (just like the HTML output) instead of page references. This
-# makes the output suitable for online browsing using a PDF viewer.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-PDF_HYPERLINKS         = YES
-
-# If the LATEX_PDFLATEX tag is set to YES, doxygen will use pdflatex to generate
-# the PDF file directly from the LaTeX files. Set this option to YES to get a
-# higher quality PDF documentation.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-USE_PDFLATEX           = YES
-
-# If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \batchmode
-# command to the generated LaTeX files. This will instruct LaTeX to keep running
-# if errors occur, instead of asking the user for help. This option is also used
-# when generating formulas in HTML.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_BATCHMODE        = NO
-
-# If the LATEX_HIDE_INDICES tag is set to YES then doxygen will not include the
-# index chapters (such as File Index, Compound Index, etc.) in the output.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_HIDE_INDICES     = NO
-
-# If the LATEX_SOURCE_CODE tag is set to YES then doxygen will include source
-# code with syntax highlighting in the LaTeX output.
-#
-# Note that which sources are shown also depends on other settings such as
-# SOURCE_BROWSER.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_SOURCE_CODE      = NO
-
-# The LATEX_BIB_STYLE tag can be used to specify the style to use for the
-# bibliography, e.g. plainnat, or ieeetr. See
-# http://en.wikipedia.org/wiki/BibTeX and \cite for more info.
-# The default value is: plain.
-# This tag requires that the tag GENERATE_LATEX is set to YES.
-
-LATEX_BIB_STYLE        = plain
-
-#---------------------------------------------------------------------------
-# Configuration options related to the RTF output
-#---------------------------------------------------------------------------
-
-# If the GENERATE_RTF tag is set to YES doxygen will generate RTF output. The
-# RTF output is optimized for Word 97 and may not look too pretty with other RTF
-# readers/editors.
-# The default value is: NO.
-
-GENERATE_RTF           = NO
-
-# The RTF_OUTPUT tag is used to specify where the RTF docs will be put. If a
-# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-# it.
-# The default directory is: rtf.
-# This tag requires that the tag GENERATE_RTF is set to YES.
-
-RTF_OUTPUT             = rtf
-
-# If the COMPACT_RTF tag is set to YES doxygen generates more compact RTF
-# documents. This may be useful for small projects and may help to save some
-# trees in general.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_RTF is set to YES.
-
-COMPACT_RTF            = NO
-
-# If the RTF_HYPERLINKS tag is set to YES, the RTF that is generated will
-# contain hyperlink fields. The RTF file will contain links (just like the HTML
-# output) instead of page references. This makes the output suitable for online
-# browsing using Word or some other Word compatible readers that support those
-# fields.
-#
-# Note: WordPad (write) and others do not support links.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_RTF is set to YES.
-
-RTF_HYPERLINKS         = NO
-
-# Load stylesheet definitions from file. Syntax is similar to doxygen's config
-# file, i.e. a series of assignments. You only have to provide replacements,
-# missing definitions are set to their default value.
-#
-# See also section "Doxygen usage" for information on how to generate the
-# default style sheet that doxygen normally uses.
-# This tag requires that the tag GENERATE_RTF is set to YES.
-
-RTF_STYLESHEET_FILE    = 
-
-# Set optional variables used in the generation of an RTF document. Syntax is
-# similar to doxygen's config file. A template extensions file can be generated
-# using doxygen -e rtf extensionFile.
-# This tag requires that the tag GENERATE_RTF is set to YES.
-
-RTF_EXTENSIONS_FILE    = 
-
-#---------------------------------------------------------------------------
-# Configuration options related to the man page output
-#---------------------------------------------------------------------------
-
-# If the GENERATE_MAN tag is set to YES doxygen will generate man pages for
-# classes and files.
-# The default value is: NO.
-
-GENERATE_MAN           = NO
-
-# The MAN_OUTPUT tag is used to specify where the man pages will be put. If a
-# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-# it. A directory man3 will be created inside the directory specified by
-# MAN_OUTPUT.
-# The default directory is: man.
-# This tag requires that the tag GENERATE_MAN is set to YES.
-
-MAN_OUTPUT             = man
-
-# The MAN_EXTENSION tag determines the extension that is added to the generated
-# man pages. In case the manual section does not start with a number, the number
-# 3 is prepended. The dot (.) at the beginning of the MAN_EXTENSION tag is
-# optional.
-# The default value is: .3.
-# This tag requires that the tag GENERATE_MAN is set to YES.
-
-MAN_EXTENSION          = .3
-
-# If the MAN_LINKS tag is set to YES and doxygen generates man output, then it
-# will generate one additional man file for each entity documented in the real
-# man page(s). These additional files only source the real man page, but without
-# them the man command would be unable to find the correct page.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_MAN is set to YES.
-
-MAN_LINKS              = NO
-
-#---------------------------------------------------------------------------
-# Configuration options related to the XML output
-#---------------------------------------------------------------------------
-
-# If the GENERATE_XML tag is set to YES doxygen will generate an XML file that
-# captures the structure of the code including all documentation.
-# The default value is: NO.
-
-GENERATE_XML           = NO
-
-# The XML_OUTPUT tag is used to specify where the XML pages will be put. If a
-# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-# it.
-# The default directory is: xml.
-# This tag requires that the tag GENERATE_XML is set to YES.
-
-XML_OUTPUT             = xml
-
-# The XML_SCHEMA tag can be used to specify a XML schema, which can be used by a
-# validating XML parser to check the syntax of the XML files.
-# This tag requires that the tag GENERATE_XML is set to YES.
-
-XML_SCHEMA             = 
-
-# The XML_DTD tag can be used to specify a XML DTD, which can be used by a
-# validating XML parser to check the syntax of the XML files.
-# This tag requires that the tag GENERATE_XML is set to YES.
-
-XML_DTD                = 
-
-# If the XML_PROGRAMLISTING tag is set to YES doxygen will dump the program
-# listings (including syntax highlighting and cross-referencing information) to
-# the XML output. Note that enabling this will significantly increase the size
-# of the XML output.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_XML is set to YES.
-
-XML_PROGRAMLISTING     = YES
-
-#---------------------------------------------------------------------------
-# Configuration options related to the DOCBOOK output
-#---------------------------------------------------------------------------
-
-# If the GENERATE_DOCBOOK tag is set to YES doxygen will generate Docbook files
-# that can be used to generate PDF.
-# The default value is: NO.
-
-GENERATE_DOCBOOK       = NO
-
-# The DOCBOOK_OUTPUT tag is used to specify where the Docbook pages will be put.
-# If a relative path is entered the value of OUTPUT_DIRECTORY will be put in
-# front of it.
-# The default directory is: docbook.
-# This tag requires that the tag GENERATE_DOCBOOK is set to YES.
-
-DOCBOOK_OUTPUT         = docbook
-
-#---------------------------------------------------------------------------
-# Configuration options for the AutoGen Definitions output
-#---------------------------------------------------------------------------
-
-# If the GENERATE_AUTOGEN_DEF tag is set to YES doxygen will generate an AutoGen
-# Definitions (see http://autogen.sf.net) file that captures the structure of
-# the code including all documentation. Note that this feature is still
-# experimental and incomplete at the moment.
-# The default value is: NO.
-
-GENERATE_AUTOGEN_DEF   = NO
-
-#---------------------------------------------------------------------------
-# Configuration options related to the Perl module output
-#---------------------------------------------------------------------------
-
-# If the GENERATE_PERLMOD tag is set to YES doxygen will generate a Perl module
-# file that captures the structure of the code including all documentation.
-#
-# Note that this feature is still experimental and incomplete at the moment.
-# The default value is: NO.
-
-GENERATE_PERLMOD       = NO
-
-# If the PERLMOD_LATEX tag is set to YES doxygen will generate the necessary
-# Makefile rules, Perl scripts and LaTeX code to be able to generate PDF and DVI
-# output from the Perl module output.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_PERLMOD is set to YES.
-
-PERLMOD_LATEX          = NO
-
-# If the PERLMOD_PRETTY tag is set to YES the Perl module output will be nicely
-# formatted so it can be parsed by a human reader. This is useful if you want to
-# understand what is going on. On the other hand, if this tag is set to NO the
-# size of the Perl module output will be much smaller and Perl will parse it
-# just the same.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_PERLMOD is set to YES.
-
-PERLMOD_PRETTY         = YES
-
-# The names of the make variables in the generated doxyrules.make file are
-# prefixed with the string contained in PERLMOD_MAKEVAR_PREFIX. This is useful
-# so different doxyrules.make files included by the same Makefile don't
-# overwrite each other's variables.
-# This tag requires that the tag GENERATE_PERLMOD is set to YES.
-
-PERLMOD_MAKEVAR_PREFIX = 
-
-#---------------------------------------------------------------------------
-# Configuration options related to the preprocessor
-#---------------------------------------------------------------------------
-
-# If the ENABLE_PREPROCESSING tag is set to YES doxygen will evaluate all
-# C-preprocessor directives found in the sources and include files.
-# The default value is: YES.
-
-ENABLE_PREPROCESSING   = YES
-
-# If the MACRO_EXPANSION tag is set to YES doxygen will expand all macro names
-# in the source code. If set to NO only conditional compilation will be
-# performed. Macro expansion can be done in a controlled way by setting
-# EXPAND_ONLY_PREDEF to YES.
-# The default value is: NO.
-# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
-
-MACRO_EXPANSION        = YES
-
-# If the EXPAND_ONLY_PREDEF and MACRO_EXPANSION tags are both set to YES then
-# the macro expansion is limited to the macros specified with the PREDEFINED and
-# EXPAND_AS_DEFINED tags.
-# The default value is: NO.
-# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
-
-EXPAND_ONLY_PREDEF     = YES
-
-# If the SEARCH_INCLUDES tag is set to YES the includes files in the
-# INCLUDE_PATH will be searched if a #include is found.
-# The default value is: YES.
-# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
-
-SEARCH_INCLUDES        = YES
-
-# The INCLUDE_PATH tag can be used to specify one or more directories that
-# contain include files that are not input files but should be processed by the
-# preprocessor.
-# This tag requires that the tag SEARCH_INCLUDES is set to YES.
-
-INCLUDE_PATH           = 
-
-# You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard
-# patterns (like *.h and *.hpp) to filter out the header-files in the
-# directories. If left blank, the patterns specified with FILE_PATTERNS will be
-# used.
-# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
-
-INCLUDE_FILE_PATTERNS  = 
-
-# The PREDEFINED tag can be used to specify one or more macro names that are
-# defined before the preprocessor is started (similar to the -D option of e.g.
-# gcc). The argument of the tag is a list of macros of the form: name or
-# name=definition (no spaces). If the definition and the "=" are omitted, "=1"
-# is assumed. To prevent a macro definition from being undefined via #undef or
-# recursively expanded use the := operator instead of the = operator.
-# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
-
-PREDEFINED             = 
-
-# If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then this
-# tag can be used to specify a list of macro names that should be expanded. The
-# macro definition that is found in the sources will be used. Use the PREDEFINED
-# tag if you want to use a different macro definition that overrules the
-# definition found in the source code.
-# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
-
-EXPAND_AS_DEFINED      = 
-
-# If the SKIP_FUNCTION_MACROS tag is set to YES then doxygen's preprocessor will
-# remove all refrences to function-like macros that are alone on a line, have an
-# all uppercase name, and do not end with a semicolon. Such function macros are
-# typically used for boiler-plate code, and will confuse the parser if not
-# removed.
-# The default value is: YES.
-# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
-
-SKIP_FUNCTION_MACROS   = YES
-
-#---------------------------------------------------------------------------
-# Configuration options related to external references
-#---------------------------------------------------------------------------
-
-# The TAGFILES tag can be used to specify one or more tag files. For each tag
-# file the location of the external documentation should be added. The format of
-# a tag file without this location is as follows:
-# TAGFILES = file1 file2 ...
-# Adding location for the tag files is done as follows:
-# TAGFILES = file1=loc1 "file2 = loc2" ...
-# where loc1 and loc2 can be relative or absolute paths or URLs. See the
-# section "Linking to external documentation" for more information about the use
-# of tag files.
-# Note: Each tag file must have an unique name (where the name does NOT include
-# the path). If a tag file is not located in the directory in which doxygen is
-# run, you must also specify the path to the tagfile here.
-
-TAGFILES               = 
-
-# When a file name is specified after GENERATE_TAGFILE, doxygen will create a
-# tag file that is based on the input files it reads. See section "Linking to
-# external documentation" for more information about the usage of tag files.
-
-GENERATE_TAGFILE       = 
-
-# If the ALLEXTERNALS tag is set to YES all external class will be listed in the
-# class index. If set to NO only the inherited external classes will be listed.
-# The default value is: NO.
-
-ALLEXTERNALS           = NO
-
-# If the EXTERNAL_GROUPS tag is set to YES all external groups will be listed in
-# the modules index. If set to NO, only the current project's groups will be
-# listed.
-# The default value is: YES.
-
-EXTERNAL_GROUPS        = YES
-
-# If the EXTERNAL_PAGES tag is set to YES all external pages will be listed in
-# the related pages index. If set to NO, only the current project's pages will
-# be listed.
-# The default value is: YES.
-
-EXTERNAL_PAGES         = YES
-
-# The PERL_PATH should be the absolute path and name of the perl script
-# interpreter (i.e. the result of 'which perl').
-# The default file (with absolute path) is: /usr/bin/perl.
-
-PERL_PATH              = /usr/bin/perl
-
-#---------------------------------------------------------------------------
-# Configuration options related to the dot tool
-#---------------------------------------------------------------------------
-
-# If the CLASS_DIAGRAMS tag is set to YES doxygen will generate a class diagram
-# (in HTML and LaTeX) for classes with base or super classes. Setting the tag to
-# NO turns the diagrams off. Note that this option also works with HAVE_DOT
-# disabled, but it is recommended to install and use dot, since it yields more
-# powerful graphs.
-# The default value is: YES.
-
-CLASS_DIAGRAMS         = NO
-
-# You can define message sequence charts within doxygen comments using the \msc
-# command. Doxygen will then run the mscgen tool (see:
-# http://www.mcternan.me.uk/mscgen/)) to produce the chart and insert it in the
-# documentation. The MSCGEN_PATH tag allows you to specify the directory where
-# the mscgen tool resides. If left empty the tool is assumed to be found in the
-# default search path.
-
-MSCGEN_PATH            = 
-
-# You can include diagrams made with dia in doxygen documentation. Doxygen will
-# then run dia to produce the diagram and insert it in the documentation. The
-# DIA_PATH tag allows you to specify the directory where the dia binary resides.
-# If left empty dia is assumed to be found in the default search path.
-
-DIA_PATH               = 
-
-# If set to YES, the inheritance and collaboration graphs will hide inheritance
-# and usage relations if the target is undocumented or is not a class.
-# The default value is: YES.
-
-HIDE_UNDOC_RELATIONS   = YES
-
-# If you set the HAVE_DOT tag to YES then doxygen will assume the dot tool is
-# available from the path. This tool is part of Graphviz (see:
-# http://www.graphviz.org/), a graph visualization toolkit from AT&T and Lucent
-# Bell Labs. The other options in this section have no effect if this option is
-# set to NO
-# The default value is: NO.
-
-HAVE_DOT               = YES
-
-# The DOT_NUM_THREADS specifies the number of dot invocations doxygen is allowed
-# to run in parallel. When set to 0 doxygen will base this on the number of
-# processors available in the system. You can set it explicitly to a value
-# larger than 0 to get control over the balance between CPU load and processing
-# speed.
-# Minimum value: 0, maximum value: 32, default value: 0.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_NUM_THREADS        = 0
-
-# When you want a differently looking font n the dot files that doxygen
-# generates you can specify the font name using DOT_FONTNAME. You need to make
-# sure dot is able to find the font, which can be done by putting it in a
-# standard location or by setting the DOTFONTPATH environment variable or by
-# setting DOT_FONTPATH to the directory containing the font.
-# The default value is: Helvetica.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_FONTNAME           = Helvetica
-
-# The DOT_FONTSIZE tag can be used to set the size (in points) of the font of
-# dot graphs.
-# Minimum value: 4, maximum value: 24, default value: 10.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_FONTSIZE           = 10
-
-# By default doxygen will tell dot to use the default font as specified with
-# DOT_FONTNAME. If you specify a different font using DOT_FONTNAME you can set
-# the path where dot can find it using this tag.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_FONTPATH           = 
-
-# If the CLASS_GRAPH tag is set to YES then doxygen will generate a graph for
-# each documented class showing the direct and indirect inheritance relations.
-# Setting this tag to YES will force the CLASS_DIAGRAMS tag to NO.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-CLASS_GRAPH            = YES
-
-# If the COLLABORATION_GRAPH tag is set to YES then doxygen will generate a
-# graph for each documented class showing the direct and indirect implementation
-# dependencies (inheritance, containment, and class references variables) of the
-# class with other documented classes.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-COLLABORATION_GRAPH    = YES
-
-# If the GROUP_GRAPHS tag is set to YES then doxygen will generate a graph for
-# groups, showing the direct groups dependencies.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-GROUP_GRAPHS           = YES
-
-# If the UML_LOOK tag is set to YES doxygen will generate inheritance and
-# collaboration diagrams in a style similar to the OMG's Unified Modeling
-# Language.
-# The default value is: NO.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-UML_LOOK               = YES
-
-# If the UML_LOOK tag is enabled, the fields and methods are shown inside the
-# class node. If there are many fields or methods and many nodes the graph may
-# become too big to be useful. The UML_LIMIT_NUM_FIELDS threshold limits the
-# number of items for each type to make the size more manageable. Set this to 0
-# for no limit. Note that the threshold may be exceeded by 50% before the limit
-# is enforced. So when you set the threshold to 10, up to 15 fields may appear,
-# but if the number exceeds 15, the total amount of fields shown is limited to
-# 10.
-# Minimum value: 0, maximum value: 100, default value: 10.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-UML_LIMIT_NUM_FIELDS   = 100
-
-# If the TEMPLATE_RELATIONS tag is set to YES then the inheritance and
-# collaboration graphs will show the relations between templates and their
-# instances.
-# The default value is: NO.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-TEMPLATE_RELATIONS     = YES
-
-# If the INCLUDE_GRAPH, ENABLE_PREPROCESSING and SEARCH_INCLUDES tags are set to
-# YES then doxygen will generate a graph for each documented file showing the
-# direct and indirect include dependencies of the file with other documented
-# files.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-INCLUDE_GRAPH          = YES
-
-# If the INCLUDED_BY_GRAPH, ENABLE_PREPROCESSING and SEARCH_INCLUDES tags are
-# set to YES then doxygen will generate a graph for each documented file showing
-# the direct and indirect include dependencies of the file with other documented
-# files.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-INCLUDED_BY_GRAPH      = YES
-
-# If the CALL_GRAPH tag is set to YES then doxygen will generate a call
-# dependency graph for every global function or class method.
-#
-# Note that enabling this option will significantly increase the time of a run.
-# So in most cases it will be better to enable call graphs for selected
-# functions only using the \callgraph command.
-# The default value is: NO.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-CALL_GRAPH             = YES
-
-# If the CALLER_GRAPH tag is set to YES then doxygen will generate a caller
-# dependency graph for every global function or class method.
-#
-# Note that enabling this option will significantly increase the time of a run.
-# So in most cases it will be better to enable caller graphs for selected
-# functions only using the \callergraph command.
-# The default value is: NO.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-CALLER_GRAPH           = YES
-
-# If the GRAPHICAL_HIERARCHY tag is set to YES then doxygen will graphical
-# hierarchy of all classes instead of a textual one.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-GRAPHICAL_HIERARCHY    = YES
-
-# If the DIRECTORY_GRAPH tag is set to YES then doxygen will show the
-# dependencies a directory has on other directories in a graphical way. The
-# dependency relations are determined by the #include relations between the
-# files in the directories.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DIRECTORY_GRAPH        = YES
-
-# The DOT_IMAGE_FORMAT tag can be used to set the image format of the images
-# generated by dot.
-# Note: If you choose svg you need to set HTML_FILE_EXTENSION to xhtml in order
-# to make the SVG files visible in IE 9+ (other browsers do not have this
-# requirement).
-# Possible values are: png, jpg, gif and svg.
-# The default value is: png.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_IMAGE_FORMAT       = png
-
-# If DOT_IMAGE_FORMAT is set to svg, then this option can be set to YES to
-# enable generation of interactive SVG images that allow zooming and panning.
-#
-# Note that this requires a modern browser other than Internet Explorer. Tested
-# and working are Firefox, Chrome, Safari, and Opera.
-# Note: For IE 9+ you need to set HTML_FILE_EXTENSION to xhtml in order to make
-# the SVG files visible. Older versions of IE do not have SVG support.
-# The default value is: NO.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-INTERACTIVE_SVG        = NO
-
-# The DOT_PATH tag can be used to specify the path where the dot tool can be
-# found. If left blank, it is assumed the dot tool can be found in the path.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_PATH               = 
-
-# The DOTFILE_DIRS tag can be used to specify one or more directories that
-# contain dot files that are included in the documentation (see the \dotfile
-# command).
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOTFILE_DIRS           = 
-
-# The MSCFILE_DIRS tag can be used to specify one or more directories that
-# contain msc files that are included in the documentation (see the \mscfile
-# command).
-
-MSCFILE_DIRS           = 
-
-# The DIAFILE_DIRS tag can be used to specify one or more directories that
-# contain dia files that are included in the documentation (see the \diafile
-# command).
-
-DIAFILE_DIRS           = 
-
-# The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of nodes
-# that will be shown in the graph. If the number of nodes in a graph becomes
-# larger than this value, doxygen will truncate the graph, which is visualized
-# by representing a node as a red box. Note that doxygen if the number of direct
-# children of the root node in a graph is already larger than
-# DOT_GRAPH_MAX_NODES then the graph will not be shown at all. Also note that
-# the size of a graph can be further restricted by MAX_DOT_GRAPH_DEPTH.
-# Minimum value: 0, maximum value: 10000, default value: 50.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_GRAPH_MAX_NODES    = 50
-
-# The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the graphs
-# generated by dot. A depth value of 3 means that only nodes reachable from the
-# root by following a path via at most 3 edges will be shown. Nodes that lay
-# further from the root node will be omitted. Note that setting this option to 1
-# or 2 may greatly reduce the computation time needed for large code bases. Also
-# note that the size of a graph can be further restricted by
-# DOT_GRAPH_MAX_NODES. Using a depth of 0 means no depth restriction.
-# Minimum value: 0, maximum value: 1000, default value: 0.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-MAX_DOT_GRAPH_DEPTH    = 0
-
-# Set the DOT_TRANSPARENT tag to YES to generate images with a transparent
-# background. This is disabled by default, because dot on Windows does not seem
-# to support this out of the box.
-#
-# Warning: Depending on the platform used, enabling this option may lead to
-# badly anti-aliased labels on the edges of a graph (i.e. they become hard to
-# read).
-# The default value is: NO.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_TRANSPARENT        = YES
-
-# Set the DOT_MULTI_TARGETS tag to YES allow dot to generate multiple output
-# files in one run (i.e. multiple -o and -T options on the command line). This
-# makes dot run faster, but since only newer versions of dot (>1.8.10) support
-# this, this feature is disabled by default.
-# The default value is: NO.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_MULTI_TARGETS      = YES
-
-# If the GENERATE_LEGEND tag is set to YES doxygen will generate a legend page
-# explaining the meaning of the various boxes and arrows in the dot generated
-# graphs.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-GENERATE_LEGEND        = YES
-
-# If the DOT_CLEANUP tag is set to YES doxygen will remove the intermediate dot
-# files that are used to generate the various graphs.
-# The default value is: YES.
-# This tag requires that the tag HAVE_DOT is set to YES.
-
-DOT_CLEANUP            = YES
diff --git a/documentation/doxygen/DoxygenLayout.xml b/documentation/doxygen/DoxygenLayout.xml
deleted file mode 100644
index 14b3616a94858fd4d5eb687f1ed9de1d94fa2c71..0000000000000000000000000000000000000000
--- a/documentation/doxygen/DoxygenLayout.xml
+++ /dev/null
@@ -1,194 +0,0 @@
-<doxygenlayout version="1.0">
-  <!-- Generated by doxygen 1.8.7 -->
-  <!-- Navigation index tabs for HTML output -->
-  <navindex>
-    <tab type="mainpage" visible="yes" title=""/>
-    <tab type="pages" visible="yes" title="" intro=""/>
-    <tab type="modules" visible="yes" title="" intro=""/>
-    <tab type="namespaces" visible="yes" title="">
-      <tab type="namespacelist" visible="yes" title="" intro=""/>
-      <tab type="namespacemembers" visible="yes" title="" intro=""/>
-    </tab>
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+<script type="text/javascript" src="navtree.js"></script>
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+/* @license-end */</script>
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 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
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+      <div id="nav-sync" class="sync"></div>
+    </div>
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+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_back_end_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 <dl class="section author"><dt>Author</dt><dd>BaM </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_back_end_8hxx.html">CLASSBackEnd.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
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 /* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
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+      <div id="nav-sync" class="sync"></div>
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+/* @license-end */
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</div><div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;        <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a1162eefe8cc390070907ef7b9775ee39">SetIVArrayArrivalTime</a> ( std::vector&lt; cSecond &gt; <span class="keyword">const</span>&amp;  IVArrayArrivalTime); </div><div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;</div><div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;</div><div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;                <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a35b44d021a5198c0100ee00bb980a102">SetDecayDataBank</a>      ( <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* decayDB   ); </div><div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;        <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a56e83bd1fc0ff176e4efb9ef7cbd89c8">SetOutBackEndFacility</a> ( <a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>* befacility ); </div><div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;        </div><div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;        <span class="keyword">using</span> CLASSFacility::SetName;</div><div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;        </div><div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;        </div><div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;        </div><div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160; 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       </div><div class="line"><a name="l00119"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a4e6f213f1c168b671a63b37ee6d7598f">  119</a></span>&#160;        <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a4e6f213f1c168b671a63b37ee6d7598f">Evolution</a> ( cSecond t ) {} </div><div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;</div><div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;        <span class="keywordtype">void</span> UpdateInsideIV ();</div><div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;        </div><div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;    protected :</div><div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;        <a class="code" href="class_isotopic_vector.html">IsotopicVector</a> <a class="code" href="class_c_l_a_s_s_back_end.html#af526093bcfb6d3ae076be75c07621b94">GetDecay</a> ( <a class="code" href="class_isotopic_vector.html">IsotopicVector</a> <span class="keyword">const</span>&amp; isotopicvector , cSecond t ); </div><div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;</div><div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;    <span class="comment">//********* Internal Parameter *********//</span></div><div class="line"><a name="l00127"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">  127</a></span>&#160;        std::vector&lt;IsotopicVector&gt; <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>;            </div><div class="line"><a name="l00128"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a225a59651eb31cc17a8b04a815f12110">  128</a></span>&#160;        std::vector&lt;cSecond&gt;        <a class="code" href="class_c_l_a_s_s_back_end.html#a225a59651eb31cc17a8b04a815f12110">fIVArrayArrivalTime</a>; </div><div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;    </div><div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00131"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a195858c1a949272f7ab2891039bac601">  131</a></span>&#160;        <a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>* <a class="code" href="class_c_l_a_s_s_back_end.html#a195858c1a949272f7ab2891039bac601">fOutBackEndFacility</a>; </div><div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;</div><div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;    private :</div><div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;        <span class="keywordtype">bool</span> fIsStorageType; </div><div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;    </div><div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;        <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* fDecayDataBase; </div><div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;</div><div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;    ClassDef(<a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>,2);</div><div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;};</div><div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;</div><div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160;</div><div class="line"><a name="l00146"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a8b353623e1c58164d5597d2896ce45bc">  146</a></span>&#160;<span class="keyword">inline</span> std::vector&lt;IsotopicVector&gt; <a class="code" href="class_c_l_a_s_s_back_end.html#a8b353623e1c58164d5597d2896ce45bc">CLASSBackEnd::GetIVArray</a>            ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>;            }</div><div class="line"><a name="l00147"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a4daf50330ab6caecdb9cb44692fdb49b">  147</a></span>&#160;<span class="keyword">inline</span> std::vector&lt;cSecond&gt;        <a class="code" href="class_c_l_a_s_s_back_end.html#a4daf50330ab6caecdb9cb44692fdb49b">CLASSBackEnd::GetIVArrayArrivalTime</a> ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a225a59651eb31cc17a8b04a815f12110">fIVArrayArrivalTime</a>; }</div><div class="line"><a name="l00148"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#ab1ffc2d539ddecfbd24aabeff9b5609b">  148</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">int</span>                         <a class="code" href="class_c_l_a_s_s_back_end.html#ab1ffc2d539ddecfbd24aabeff9b5609b">CLASSBackEnd::GetIVNumber</a>           ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>.size();     }</div><div class="line"><a name="l00149"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a431262a092a5198ac14dae0aafbc9a35">  149</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">bool</span>                        <a class="code" href="class_c_l_a_s_s_back_end.html#a431262a092a5198ac14dae0aafbc9a35">CLASSBackEnd::GetStorageType</a>        ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> fIsStorageType;      }</div><div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160;<span class="keyword">inline</span> <a class="code" href="class_isotopic_vector.html">IsotopicVector</a> CLASSBackEnd::GetIV ( <span class="keywordtype">int</span> i )<span class="keyword"> const</span></div><div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;<span class="keyword"></span>{</div><div class="line"><a name="l00152"></a><span class="lineno">  152</span>&#160;    <span class="keywordflow">if</span> ( i &lt; (<span class="keywordtype">int</span>)<a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>.size() ) { <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>[i];      }</div><div class="line"><a name="l00153"></a><span class="lineno">  153</span>&#160;    <span class="keywordflow">else</span>                            { <span class="keywordflow">return</span> <a class="code" href="class_isotopic_vector.html">IsotopicVector</a>(); }</div><div class="line"><a name="l00154"></a><span class="lineno">  154</span>&#160;}</div><div class="line"><a name="l00155"></a><span class="lineno">  155</span>&#160;</div><div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00157"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#aee33727c8221b5bb673a64fe3219f17d">  157</a></span>&#160;    <span class="keyword">inline</span> <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* <a class="code" href="class_c_l_a_s_s_back_end.html#aee33727c8221b5bb673a64fe3219f17d">CLASSBackEnd::GetDecayDataBank</a>      ()       { <span class="keywordflow">return</span> fDecayDataBase;      }</div><div class="line"><a name="l00158"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a683aac1c58f373e3dd10784679875a77">  158</a></span>&#160;    <span class="keyword">inline</span> <a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>*  <a class="code" href="class_c_l_a_s_s_back_end.html#a683aac1c58f373e3dd10784679875a77">CLASSBackEnd::GetOutBackEndFacility</a> ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a195858c1a949272f7ab2891039bac601">fOutBackEndFacility</a>; }</div><div class="line"><a name="l00159"></a><span class="lineno">  159</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00160"></a><span class="lineno">  160</span>&#160;</div><div class="line"><a name="l00161"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a8ee7a2d9cad1bc2709944574539ba6eb">  161</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a8ee7a2d9cad1bc2709944574539ba6eb">CLASSBackEnd::SetIsStorageType</a> ( <span class="keywordtype">bool</span> val ) { fIsStorageType = val; }</div><div class="line"><a name="l00162"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a1162eefe8cc390070907ef7b9775ee39">  162</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a1162eefe8cc390070907ef7b9775ee39">CLASSBackEnd::SetIVArrayArrivalTime</a> ( std::vector&lt; cSecond &gt; <span class="keyword">const</span>&amp;  IVArrayArrivalTime){ <a class="code" href="class_c_l_a_s_s_back_end.html#a225a59651eb31cc17a8b04a815f12110">fIVArrayArrivalTime</a> = IVArrayArrivalTime; }</div><div class="line"><a name="l00163"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a1f5805e328b88df880870c5f334e7fd3">  163</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a1f5805e328b88df880870c5f334e7fd3">CLASSBackEnd::SetIVArray</a> ( std::vector&lt; IsotopicVector &gt; <span class="keyword">const</span>&amp; ivarray ){ <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a> = ivarray; }</div><div class="line"><a name="l00164"></a><span class="lineno">  164</span>&#160;</div><div class="line"><a name="l00165"></a><span class="lineno">  165</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00166"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a35b44d021a5198c0100ee00bb980a102">  166</a></span>&#160;    <span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a35b44d021a5198c0100ee00bb980a102">CLASSBackEnd::SetDecayDataBank</a>      ( <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* decayDB   )</div><div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;        { fDecayDataBase = decayDB; }</div><div class="line"><a name="l00168"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a56e83bd1fc0ff176e4efb9ef7cbd89c8">  168</a></span>&#160;    <span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a56e83bd1fc0ff176e4efb9ef7cbd89c8">CLASSBackEnd::SetOutBackEndFacility</a> ( <a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>* befacility )</div><div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;        { <a class="code" href="class_c_l_a_s_s_back_end.html#a195858c1a949272f7ab2891039bac601">fOutBackEndFacility</a> = befacility; fIsStorageType = <span class="keyword">false</span>; }</div><div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;</div><div class="line"><a name="l00172"></a><span class="lineno">  172</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;</div><div class="ttc" id="class_c_l_a_s_s_back_end_html_a1162eefe8cc390070907ef7b9775ee39"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html#a1162eefe8cc390070907ef7b9775ee39">CLASSBackEnd::SetIVArrayArrivalTime</a></div><div class="ttdeci">void SetIVArrayArrivalTime(std::vector&lt; cSecond &gt; const &amp;IVArrayArrivalTime)</div><div class="ttdoc">Set Arrival Time in Back end. </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.hxx:162</div></div>
+<a href="_c_l_a_s_s_back_end_8hxx.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="preprocessor">#ifndef _CLASSBACKEND_</span></div><div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="preprocessor">#define _CLASSBACKEND_</span></div><div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;</div><div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="preprocessor">#include &lt;string&gt;</span></div><div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="preprocessor">#include &lt;fstream&gt;</span></div><div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="preprocessor">#include &lt;map&gt;</span></div><div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;</div><div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="_c_l_a_s_s_facility_8hxx.html">CLASSFacility.hxx</a>&quot;</span></div><div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="_isotopic_vector_8hxx.html">IsotopicVector.hxx</a>&quot;</span></div><div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="_decay_data_bank_8hxx.html">DecayDataBank.hxx</a>&quot;</span></div><div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;</div><div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="preprocessor">#include &quot;TNamed.h&quot;</span></div><div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;</div><div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;<span class="comment">//________________________________________________________________________</span></div><div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;<span class="comment"></span></div><div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="comment">//________________________________________________________________________</span></div><div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;</div><div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;</div><div class="line"><a name="l00030"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html">   30</a></span>&#160;<span class="keyword">class </span><a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a> : <span class="keyword">public</span> <a class="code" href="class_c_l_a_s_s_facility.html">CLASSFacility</a></div><div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;{</div><div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;public :</div><div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;    <span class="comment">//{</span></div><div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="comment"></span></div><div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;    <a class="code" href="class_c_l_a_s_s_back_end.html#a8fccc268ae82c982e4755d47ffc0fafc">CLASSBackEnd</a> ( <span class="keywordtype">int</span> type = 0 );</div><div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;    <span class="comment">//}</span></div><div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;</div><div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;    <span class="comment">//{</span></div><div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;<span class="comment"></span></div><div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;    <a class="code" href="class_c_l_a_s_s_back_end.html#a8fccc268ae82c982e4755d47ffc0fafc">CLASSBackEnd</a> ( <a class="code" href="class_c_l_a_s_s_logger.html">CLASSLogger</a>* log , <span class="keywordtype">int</span> type = 0 );</div><div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;    <span class="comment">//}</span></div><div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;</div><div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;    <span class="comment">//{</span></div><div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;<span class="comment"></span></div><div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;    <a class="code" href="class_c_l_a_s_s_back_end.html#a8fccc268ae82c982e4755d47ffc0fafc">CLASSBackEnd</a> ( <a class="code" href="class_c_l_a_s_s_logger.html">CLASSLogger</a>* log , cSecond cycletime, <span class="keywordtype">int</span> type = 0 );</div><div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;    <span class="comment">//}</span></div><div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;<span class="comment"></span></div><div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;    <span class="comment">//********* Get Method *********//</span></div><div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;<span class="comment"></span></div><div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160;    std::vector&lt;IsotopicVector&gt; <a class="code" href="class_c_l_a_s_s_back_end.html#a8b353623e1c58164d5597d2896ce45bc">GetIVArray</a>            () <span class="keyword">const</span>; </div><div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160;    std::vector&lt;cSecond&gt;        <a class="code" href="class_c_l_a_s_s_back_end.html#a4daf50330ab6caecdb9cb44692fdb49b">GetIVArrayArrivalTime</a> () <span class="keyword">const</span>; </div><div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;</div><div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;    <span class="keywordtype">int</span>  <a class="code" href="class_c_l_a_s_s_back_end.html#ab1ffc2d539ddecfbd24aabeff9b5609b">GetIVNumber</a>     () <span class="keyword">const</span>; </div><div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;    <span class="keywordtype">bool</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a431262a092a5198ac14dae0aafbc9a35">GetStorageType</a>  () <span class="keyword">const</span>; </div><div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;    <a class="code" href="class_isotopic_vector.html">IsotopicVector</a> GetIV ( <span class="keywordtype">int</span> i ) <span class="keyword">const</span>;</div><div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160;</div><div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;    <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* <a class="code" href="class_c_l_a_s_s_back_end.html#aee33727c8221b5bb673a64fe3219f17d">GetDecayDataBank</a>      ();               </div><div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;    <a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>*  <a class="code" href="class_c_l_a_s_s_back_end.html#a683aac1c58f373e3dd10784679875a77">GetOutBackEndFacility</a> () <span class="keyword">const</span>;         </div><div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;    <span class="keyword">virtual</span> std::map&lt;cSecond, int&gt; <a class="code" href="class_c_l_a_s_s_back_end.html#a4b789357024e5d6261c4ea5f9d620a9a">GetTheBackEndTimePath</a>(); </div><div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160;</div><div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;</div><div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;    <span class="comment">//********* Set Method *********//</span></div><div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;<span class="comment"></span>    <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a8ee7a2d9cad1bc2709944574539ba6eb">SetIsStorageType</a> ( <span class="keywordtype">bool</span> val = <span class="keyword">true</span> );                              </div><div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;    <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a1f5805e328b88df880870c5f334e7fd3">SetIVArray</a>       ( std::vector&lt; IsotopicVector &gt; <span class="keyword">const</span>&amp; ivarray ); </div><div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;    <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a1162eefe8cc390070907ef7b9775ee39">SetIVArrayArrivalTime</a> ( std::vector&lt; cSecond &gt; <span class="keyword">const</span>&amp;  IVArrayArrivalTime); </div><div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;</div><div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;</div><div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;    <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a35b44d021a5198c0100ee00bb980a102">SetDecayDataBank</a>      ( <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* decayDB   ); </div><div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;    <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a56e83bd1fc0ff176e4efb9ef7cbd89c8">SetOutBackEndFacility</a> ( <a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>* befacility ); </div><div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;</div><div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;    <span class="keyword">using</span> CLASSFacility::SetName;</div><div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;</div><div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;</div><div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;</div><div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;    <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#ae0a7fb563217bc0fbaff2cf211e6047c">ApplyZAIThreshold</a> ( <span class="keywordtype">int</span> z = 90 );        </div><div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;    <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#abfb18f26955392909a919123aa0c5a0f">AddIV</a> ( <a class="code" href="class_isotopic_vector.html">IsotopicVector</a> isotopicvector ); </div><div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;</div><div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;    <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a58c821ef59b4cd0877efd17866ba6a27">ClearIVArray</a> (); </div><div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;</div><div class="line"><a name="l00119"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a4e6f213f1c168b671a63b37ee6d7598f">  119</a></span>&#160;    <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a4e6f213f1c168b671a63b37ee6d7598f">Evolution</a> ( cSecond t ) {} </div><div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;</div><div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;    <span class="keywordtype">void</span> UpdateInsideIV ();</div><div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;</div><div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;protected :</div><div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;    <a class="code" href="class_isotopic_vector.html">IsotopicVector</a> <a class="code" href="class_c_l_a_s_s_back_end.html#af526093bcfb6d3ae076be75c07621b94">GetDecay</a> ( <a class="code" href="class_isotopic_vector.html">IsotopicVector</a> <span class="keyword">const</span>&amp; isotopicvector , cSecond t ); </div><div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;</div><div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;    <span class="comment">//********* Internal Parameter *********//</span></div><div class="line"><a name="l00127"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">  127</a></span>&#160;    std::vector&lt;IsotopicVector&gt; <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>;            </div><div class="line"><a name="l00128"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a225a59651eb31cc17a8b04a815f12110">  128</a></span>&#160;    std::vector&lt;cSecond&gt;        <a class="code" href="class_c_l_a_s_s_back_end.html#a225a59651eb31cc17a8b04a815f12110">fIVArrayArrivalTime</a>; </div><div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;</div><div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00131"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a195858c1a949272f7ab2891039bac601">  131</a></span>&#160;    <a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>* <a class="code" href="class_c_l_a_s_s_back_end.html#a195858c1a949272f7ab2891039bac601">fOutBackEndFacility</a>; </div><div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;</div><div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;private :</div><div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;    <span class="keywordtype">bool</span> fIsStorageType; </div><div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;</div><div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;    <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* fDecayDataBase; </div><div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;</div><div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;    ClassDef(<a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>, 2);</div><div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;};</div><div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;</div><div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160;</div><div class="line"><a name="l00146"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a8b353623e1c58164d5597d2896ce45bc">  146</a></span>&#160;<span class="keyword">inline</span> std::vector&lt;IsotopicVector&gt; <a class="code" href="class_c_l_a_s_s_back_end.html#a8b353623e1c58164d5597d2896ce45bc">CLASSBackEnd::GetIVArray</a>            ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>;            }</div><div class="line"><a name="l00147"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a4daf50330ab6caecdb9cb44692fdb49b">  147</a></span>&#160;<span class="keyword">inline</span> std::vector&lt;cSecond&gt;        <a class="code" href="class_c_l_a_s_s_back_end.html#a4daf50330ab6caecdb9cb44692fdb49b">CLASSBackEnd::GetIVArrayArrivalTime</a> ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a225a59651eb31cc17a8b04a815f12110">fIVArrayArrivalTime</a>; }</div><div class="line"><a name="l00148"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#ab1ffc2d539ddecfbd24aabeff9b5609b">  148</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">int</span>                         <a class="code" href="class_c_l_a_s_s_back_end.html#ab1ffc2d539ddecfbd24aabeff9b5609b">CLASSBackEnd::GetIVNumber</a>           ()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>.size(); 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(<span class="keywordtype">int</span>)<a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>.size() ) { <span class="keywordflow">return</span> <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a>[i];      }</div><div class="line"><a name="l00153"></a><span class="lineno">  153</span>&#160;    <span class="keywordflow">else</span>                            { <span class="keywordflow">return</span> <a class="code" href="class_isotopic_vector.html">IsotopicVector</a>(); }</div><div class="line"><a name="l00154"></a><span class="lineno">  154</span>&#160;}</div><div class="line"><a name="l00155"></a><span class="lineno">  155</span>&#160;</div><div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00157"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#aee33727c8221b5bb673a64fe3219f17d">  157</a></span>&#160;<span class="keyword">inline</span> <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* <a class="code" href="class_c_l_a_s_s_back_end.html#aee33727c8221b5bb673a64fe3219f17d">CLASSBackEnd::GetDecayDataBank</a>      ()       { <span class="keywordflow">return</span> fDecayDataBase; 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}</div><div class="line"><a name="l00162"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a1162eefe8cc390070907ef7b9775ee39">  162</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a1162eefe8cc390070907ef7b9775ee39">CLASSBackEnd::SetIVArrayArrivalTime</a> ( std::vector&lt; cSecond &gt; <span class="keyword">const</span>&amp;  IVArrayArrivalTime) { <a class="code" href="class_c_l_a_s_s_back_end.html#a225a59651eb31cc17a8b04a815f12110">fIVArrayArrivalTime</a> = IVArrayArrivalTime; }</div><div class="line"><a name="l00163"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a1f5805e328b88df880870c5f334e7fd3">  163</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a1f5805e328b88df880870c5f334e7fd3">CLASSBackEnd::SetIVArray</a> ( std::vector&lt; IsotopicVector &gt; <span class="keyword">const</span>&amp; ivarray ) { <a class="code" href="class_c_l_a_s_s_back_end.html#aa153fbd7d6f7a46303539153ff0f9900">fIVArray</a> = ivarray; }</div><div class="line"><a name="l00164"></a><span class="lineno">  164</span>&#160;</div><div class="line"><a name="l00165"></a><span class="lineno">  165</span>&#160;<span class="preprocessor">#ifndef __ROOTCLING__</span></div><div class="line"><a name="l00166"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a35b44d021a5198c0100ee00bb980a102">  166</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a35b44d021a5198c0100ee00bb980a102">CLASSBackEnd::SetDecayDataBank</a>      ( <a class="code" href="class_decay_data_bank.html">DecayDataBank</a>* decayDB   )</div><div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;{ fDecayDataBase = decayDB; }</div><div class="line"><a name="l00168"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_back_end.html#a56e83bd1fc0ff176e4efb9ef7cbd89c8">  168</a></span>&#160;<span class="keyword">inline</span> <span class="keywordtype">void</span> <a class="code" href="class_c_l_a_s_s_back_end.html#a56e83bd1fc0ff176e4efb9ef7cbd89c8">CLASSBackEnd::SetOutBackEndFacility</a> ( <a class="code" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a>* befacility )</div><div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;{ <a class="code" href="class_c_l_a_s_s_back_end.html#a195858c1a949272f7ab2891039bac601">fOutBackEndFacility</a> = befacility; fIsStorageType = <span class="keyword">false</span>; }</div><div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;</div><div class="line"><a name="l00172"></a><span class="lineno">  172</span>&#160;<span class="preprocessor">#endif</span></div><div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;</div><div class="ttc" id="class_c_l_a_s_s_back_end_html_a1162eefe8cc390070907ef7b9775ee39"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html#a1162eefe8cc390070907ef7b9775ee39">CLASSBackEnd::SetIVArrayArrivalTime</a></div><div class="ttdeci">void SetIVArrayArrivalTime(std::vector&lt; cSecond &gt; const &amp;IVArrayArrivalTime)</div><div class="ttdoc">Set Arrival Time in Back end. </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.hxx:162</div></div>
 <div class="ttc" id="class_c_l_a_s_s_back_end_html_ae0a7fb563217bc0fbaff2cf211e6047c"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html#ae0a7fb563217bc0fbaff2cf211e6047c">CLASSBackEnd::ApplyZAIThreshold</a></div><div class="ttdeci">virtual void ApplyZAIThreshold(int z=90)</div><div class="ttdoc">Put all nuclei below the threshold in -2 -2 -2 ZAI... </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.cxx:85</div></div>
 <div class="ttc" id="_decay_data_bank_8hxx_html"><div class="ttname"><a href="_decay_data_bank_8hxx.html">DecayDataBank.hxx</a></div><div class="ttdoc">Header file for DecayDataBank class. </div></div>
 <div class="ttc" id="class_c_l_a_s_s_back_end_html_a58c821ef59b4cd0877efd17866ba6a27"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html#a58c821ef59b4cd0877efd17866ba6a27">CLASSBackEnd::ClearIVArray</a></div><div class="ttdeci">void ClearIVArray()</div><div class="ttdoc">Empty the IVArray removing all fuel stored. </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.cxx:37</div></div>
@@ -102,11 +121,15 @@ $(function() {
 <div class="ttc" id="class_c_l_a_s_s_back_end_html"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a></div><div class="ttdoc">Class defining the common properties of all back end fuel cycle facilities. </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.hxx:30</div></div>
 <div class="ttc" id="class_c_l_a_s_s_back_end_html_a8ee7a2d9cad1bc2709944574539ba6eb"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html#a8ee7a2d9cad1bc2709944574539ba6eb">CLASSBackEnd::SetIsStorageType</a></div><div class="ttdeci">void SetIsStorageType(bool val=true)</div><div class="ttdoc">Set the fIsStorage bool. </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.hxx:161</div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_back_end_8hxx.html">CLASSBackEnd.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_constante_8hxx_source.html b/documentation/doxygen/html/_c_l_a_s_s_constante_8hxx_source.html
index 4c875bb50578d84d7adf68f188b14e7f28c2604d..679b46e047bb85d287bf856c3b9344141ea8b457 100644
--- a/documentation/doxygen/html/_c_l_a_s_s_constante_8hxx_source.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_constante_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_constante_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">CLASSConstante.hxx</div>  </div>
@@ -81,11 +100,15 @@ $(function() {
 <div class="ttc" id="class_decay_data_bank_html"><div class="ttname"><a href="class_decay_data_bank.html">DecayDataBank</a></div><div class="ttdoc">Describes outcore radioactive decays. </div><div class="ttdef"><b>Definition:</b> DecayDataBank.hxx:45</div></div>
 <div class="ttc" id="_z_a_i_mass_8hxx_html"><div class="ttname"><a href="_z_a_i_mass_8hxx.html">ZAIMass.hxx</a></div><div class="ttdoc">Header file for ZAIMass classes. </div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><b>CLASSConstante.hxx</b></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_facility_8hxx.html b/documentation/doxygen/html/_c_l_a_s_s_facility_8hxx.html
index e6a32a1c1d1d114ad3c51690326556a2c20c680e..4c117f242f46ea6152a2a4fb26c0bee23ffa0477 100644
--- a/documentation/doxygen/html/_c_l_a_s_s_facility_8hxx.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_facility_8hxx.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_facility_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a>  </div>
@@ -94,11 +113,15 @@ Classes</h2></td></tr>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Header file for <a class="el" href="class_c_l_a_s_s_facility.html" title="Defines the common properties of all facilities. ">CLASSFacility</a> class. </p>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_facility_8hxx.html">CLASSFacility.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_facility_8hxx_source.html b/documentation/doxygen/html/_c_l_a_s_s_facility_8hxx_source.html
index 327653863c8eb19c400fb430722a5f05a2619dff..627e2d2d008e64c7c5595b32bc0053490ab4c3a3 100644
--- a/documentation/doxygen/html/_c_l_a_s_s_facility_8hxx_source.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_facility_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_facility_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">CLASSFacility.hxx</div>  </div>
@@ -113,11 +132,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_facility_8hxx.html">CLASSFacility.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_headers_8hxx_source.html b/documentation/doxygen/html/_c_l_a_s_s_headers_8hxx_source.html
index 4170e06d594908677f03e42469d46e8ac5255a8c..2af1f3e443f2cc56291bc8966dcd8c46e21b5b5b 100644
--- a/documentation/doxygen/html/_c_l_a_s_s_headers_8hxx_source.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_headers_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_headers_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">CLASSHeaders.hxx</div>  </div>
@@ -85,11 +104,15 @@ $(function() {
 <div class="ttc" id="_pool_8hxx_html"><div class="ttname"><a href="_pool_8hxx.html">Pool.hxx</a></div><div class="ttdoc">Header file for Pool class. </div></div>
 <div class="ttc" id="_storage_8hxx_html"><div class="ttname"><a href="_storage_8hxx.html">Storage.hxx</a></div><div class="ttdoc">Header file for Storage class. </div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><b>CLASSHeaders.hxx</b></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx.html b/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx.html
index 5c691f1e7bc853f0513092d7aef0506ff422890a..412c8454fd735b3f16451aacedfe17ee2a776e14 100644
--- a/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_logger_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a> &#124;
@@ -125,11 +144,15 @@ Macros</h2></td></tr>
 <dl class="section author"><dt>Author</dt><dd>BaM </dd></dl>
 <dl class="section version"><dt>Version</dt><dd>2.0 </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_logger_8hxx.html">CLASSLogger.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx.js b/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx.js
new file mode 100644
index 0000000000000000000000000000000000000000..d23e89989ee95b54ef95918e65ab9611bff593c1
--- /dev/null
+++ b/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx.js
@@ -0,0 +1,12 @@
+var _c_l_a_s_s_logger_8hxx =
+[
+    [ "LogType", "class_log_type.html", "class_log_type" ],
+    [ "CLASSLogger", "class_c_l_a_s_s_logger.html", "class_c_l_a_s_s_logger" ],
+    [ "_CLASSLogger_", "_c_l_a_s_s_logger_8hxx.html#a8560fc3c19c965c396cc7a4d464a7545", null ],
+    [ "_LOGTYPE_", "_c_l_a_s_s_logger_8hxx.html#a67fa4df04347737c6e2408269318e29f", null ],
+    [ "DBGL", "_c_l_a_s_s_logger_8hxx.html#a199fde64b752128fc08e46300c664e2f", null ],
+    [ "DBGV", "_c_l_a_s_s_logger_8hxx.html#a414bdb320bb06328e1e29664f7fd6b75", null ],
+    [ "ERROR", "_c_l_a_s_s_logger_8hxx.html#a8fe83ac76edc595f6b98cd4a4127aed5", null ],
+    [ "INFO", "_c_l_a_s_s_logger_8hxx.html#ae1103fea1e1b3c41ca3322d5389f7162", null ],
+    [ "WARNING", "_c_l_a_s_s_logger_8hxx.html#a5cb439d9f933fde4cf23caa370c030e7", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx_source.html b/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx_source.html
index ef5a87335bf54724450653dcb6fbe07c9e06b64e..8eaf2a59884c384a0187e002405fd52ce0557c21 100644
--- a/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx_source.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_logger_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_logger_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">CLASSLogger.hxx</div>  </div>
@@ -85,11 +104,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_logger_8hxx.html">CLASSLogger.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_method_8hxx_source.html b/documentation/doxygen/html/_c_l_a_s_s_method_8hxx_source.html
index 95981d7fd72a4db0688d203c75b280caee2077f2..23ed6a739834065c295d20a5b765504786af5812 100644
--- a/documentation/doxygen/html/_c_l_a_s_s_method_8hxx_source.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_method_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_method_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">CLASSMethod.hxx</div>  </div>
@@ -74,11 +93,15 @@ $(function() {
 <div class="contents">
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   transform(data.begin(), data.end(), data.begin(), <a class="code" href="structmy__tolower.html">my_tolower</a>());</div><div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;    <span class="keywordflow">return</span> data;</div><div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;};</div><div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;</div><div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;</div><div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;</div><div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="keyword">static</span> <span class="keywordtype">float</span> random(<span class="keywordtype">float</span> a, <span class="keywordtype">float</span> b) <span class="comment">//peak random numebr between a and b</span></div><div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;{</div><div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160; 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   os &lt;&lt; setprecision(3) &lt;&lt; num;</div><div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;    <span class="keywordflow">return</span> os.str();</div><div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;};</div><div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;</div><div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;</div><div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;<span class="preprocessor">#endif</span></div><div class="ttc" id="structmy__tolower_html"><div class="ttname"><a href="structmy__tolower.html">my_tolower</a></div><div class="ttdef"><b>Definition:</b> CLASSMethod.hxx:10</div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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diff --git a/documentation/doxygen/html/_c_l_a_s_s_nuclei_filiation_8hxx.html b/documentation/doxygen/html/_c_l_a_s_s_nuclei_filiation_8hxx.html
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--- a/documentation/doxygen/html/_c_l_a_s_s_nuclei_filiation_8hxx.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_nuclei_filiation_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
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-</div>
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 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a>  </div>
@@ -91,11 +110,15 @@ Classes</h2></td></tr>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Header file for <a class="el" href="class_c_l_a_s_s_nuclei_filiation.html" title="Handles connection between nuclei (decay/reaction) ">CLASSNucleiFiliation</a> classes. </p>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_nuclei_filiation_8hxx.html">CLASSNucleiFiliation.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_nuclei_filiation_8hxx_source.html b/documentation/doxygen/html/_c_l_a_s_s_nuclei_filiation_8hxx_source.html
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--- a/documentation/doxygen/html/_c_l_a_s_s_nuclei_filiation_8hxx_source.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_nuclei_filiation_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">CLASSNucleiFiliation.hxx</div>  </div>
@@ -84,11 +103,15 @@ $(function() {
 <div class="ttc" id="class_c_l_a_s_s_object_html"><div class="ttname"><a href="class_c_l_a_s_s_object.html">CLASSObject</a></div><div class="ttdoc">Define common proporties of all objects. </div><div class="ttdef"><b>Definition:</b> CLASSObject.hxx:39</div></div>
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_nuclei_filiation_8hxx.html">CLASSNucleiFiliation.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_object_8hxx.html b/documentation/doxygen/html/_c_l_a_s_s_object_8hxx.html
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--- a/documentation/doxygen/html/_c_l_a_s_s_object_8hxx.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_object_8hxx.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_object_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a>  </div>
@@ -95,11 +114,15 @@ Classes</h2></td></tr>
 <dl class="section author"><dt>Author</dt><dd>BaM </dd></dl>
 <dl class="section version"><dt>Version</dt><dd>2.0 </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_c_l_a_s_s_object_8hxx.html">CLASSObject.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_c_l_a_s_s_object_8hxx_source.html b/documentation/doxygen/html/_c_l_a_s_s_object_8hxx_source.html
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--- a/documentation/doxygen/html/_c_l_a_s_s_object_8hxx_source.html
+++ b/documentation/doxygen/html/_c_l_a_s_s_object_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
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+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
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@@ -81,11 +100,15 @@ $(function() {
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 <div class="ttc" id="class_c_l_a_s_s_object_html_ac8a2251d7ce9f890a1d11f41bdf33f48"><div class="ttname"><a href="class_c_l_a_s_s_object.html#ac8a2251d7ce9f890a1d11f41bdf33f48">CLASSObject::fLog</a></div><div class="ttdeci">CLASSLogger * fLog</div><div class="ttdoc">Pointer to the Log. </div><div class="ttdef"><b>Definition:</b> CLASSObject.hxx:92</div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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diff --git a/documentation/doxygen/html/_c_l_a_s_s_reader_8hxx_source.html b/documentation/doxygen/html/_c_l_a_s_s_reader_8hxx_source.html
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
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+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
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+/* @license-end */</script>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_c_l_a_s_s_reader_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 <div class="header">
   <div class="headertitle">
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@@ -74,11 +93,15 @@ $(function() {
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 <div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="preprocessor">#include &lt;iostream&gt;</span></div><div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="preprocessor">#include &lt;vector&gt;</span></div><div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="preprocessor">#include &lt;list&gt;</span></div><div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="preprocessor">#include &lt;map&gt;</span></div><div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;</div><div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="preprocessor">#include &quot;TTree.h&quot;</span></div><div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="preprocessor">#include &quot;TString.h&quot;</span></div><div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="preprocessor">#include &quot;TMVA/Reader.h&quot;</span></div><div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="preprocessor">#include &quot;TMVA/Tools.h&quot;</span></div><div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="preprocessor">#include &quot;TMVA/MethodCuts.h&quot;</span></div><div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;</div><div class="line"><a name="l00012"></a><span class="lineno"><a class="line" href="class_c_l_a_s_s_reader.html">   12</a></span>&#160;<span class="keyword">class </span><a class="code" href="class_c_l_a_s_s_reader.html">CLASSReader</a></div><div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;{</div><div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160; 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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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diff --git a/documentation/doxygen/html/_decay_data_bank_8hxx.html b/documentation/doxygen/html/_decay_data_bank_8hxx.html
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
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 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
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  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_decay_data_bank_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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   <div class="summary">
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 <dl class="section version"><dt>Version</dt><dd>2.0 </dd></dl>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_decay_data_bank_8hxx.html">DecayDataBank.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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 </html>
diff --git a/documentation/doxygen/html/_decay_data_bank_8hxx.js b/documentation/doxygen/html/_decay_data_bank_8hxx.js
new file mode 100644
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--- /dev/null
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+    [ "cSecond", "_decay_data_bank_8hxx.html#a97bb8e26e4a9de8c246240c32b980e6c", null ],
+    [ "ReactionRateWeightedDistance", "_decay_data_bank_8hxx.html#a11b61a4895ab3f78467abbd99775d51a", null ],
+    [ "ReactionRateWeightedDistance", "_decay_data_bank_8hxx.html#a8820a90d86ec4fc2310f569bf34e7b5e", null ]
+];
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
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+/* @license-end */</script>
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@@ -48,6 +55,23 @@ $(function() {
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 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_decay_data_bank_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 <div id="MSearchSelectWindow"
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-</a> 1.8.14
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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diff --git a/documentation/doxygen/html/_dynamical_system_8hxx.html b/documentation/doxygen/html/_dynamical_system_8hxx.html
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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diff --git a/documentation/doxygen/html/_dynamical_system_8hxx_source.html b/documentation/doxygen/html/_dynamical_system_8hxx_source.html
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+/* @license-end */</script>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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 </iframe>
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-<div id="nav-path" class="navpath">
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-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
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 <dl class="section author"><dt>Author</dt><dd>NT </dd></dl>
 <dl class="section version"><dt>Version</dt><dd>1.0 </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li><li class="navelem"><a class="el" href="_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m_8hxx.html">EQM_ADS_MLP_FixedRatioPuAM.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m_8hxx_source.html b/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m_8hxx_source.html
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--- a/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m_8hxx_source.html
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@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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-<div id="nav-path" class="navpath">
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-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">EQM_ADS_MLP_FixedRatioPuAM.hxx</div>  </div>
@@ -74,11 +93,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li><li class="navelem"><a class="el" href="_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m_8hxx.html">EQM_ADS_MLP_FixedRatioPuAM.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx.html b/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx.html
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--- a/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx.html
+++ b/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a>  </div>
@@ -93,11 +112,15 @@ Classes</h2></td></tr>
 <dl class="section author"><dt>Author</dt><dd>NT </dd></dl>
 <dl class="section version"><dt>Version</dt><dd>1.0 </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li><li class="navelem"><a class="el" href="_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx.html">EQM_ADS_MLP_RatioPuAM.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx_source.html b/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx_source.html
index 0f3370aee0cfbf77d8dba8b4dcdb9d86ba3da6de..1a623e8f7b1dd2fe6c65eb355ae325d0a52b0767 100644
--- a/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx_source.html
+++ b/documentation/doxygen/html/_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_e_q_m___a_d_s___m_l_p___ratio_pu_a_m_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">EQM_ADS_MLP_RatioPuAM.hxx</div>  </div>
@@ -74,11 +93,15 @@ $(function() {
 <div class="contents">
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
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-</a> 1.8.14
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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diff --git a/documentation/doxygen/html/_e_q_m___f_b_r___m_l_p___keff_8hxx_source.html b/documentation/doxygen/html/_e_q_m___f_b_r___m_l_p___keff_8hxx_source.html
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@@ -82,11 +101,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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diff --git a/documentation/doxygen/html/_e_q_m___m_l_p___kinf_8hxx_source.html b/documentation/doxygen/html/_e_q_m___m_l_p___kinf_8hxx_source.html
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+/* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
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-<div id="nav-path" class="navpath">
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@@ -82,11 +101,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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diff --git a/documentation/doxygen/html/_e_q_m___m_l_p___p_w_r___m_ox_e_u_s_8hxx.html b/documentation/doxygen/html/_e_q_m___m_l_p___p_w_r___m_ox_e_u_s_8hxx.html
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+/* @license-end */</script>
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@@ -48,6 +55,23 @@ $(function() {
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+<div id="side-nav" class="ui-resizable side-nav-resizable">
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+/* @license-end */
+</script>
+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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diff --git a/documentation/doxygen/html/_e_q_m___m_l_p___p_w_r___m_ox_e_u_s_8hxx_source.html b/documentation/doxygen/html/_e_q_m___m_l_p___p_w_r___m_ox_e_u_s_8hxx_source.html
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+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
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+       class="ui-resizable-handle">
+  </div>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_e_q_m___m_l_p___p_w_r___m_ox_e_u_s_8hxx_source.html','');});
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 <div class="header">
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 <div class="title">EQM_MLP_PWR_MOxEUS.hxx</div>  </div>
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li><li class="navelem"><a class="el" href="_e_q_m___m_l_p___p_w_r___m_ox_e_u_s_8hxx.html">EQM_MLP_PWR_MOxEUS.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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diff --git a/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx.html b/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx.html
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--- a/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx.html
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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@@ -48,6 +55,23 @@ $(function() {
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 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_e_q_m___p_w_r___fixed_content_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
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-  <ul>
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-</div>
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 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a> &#124;
@@ -100,11 +119,15 @@ typedef void(EQM_PWR_FixedContent::*&#160;</td><td class="memItemRight" valign="
 <dl class="section author"><dt>Author</dt><dd>FC </dd></dl>
 <dl class="section version"><dt>Version</dt><dd>1.0 </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li><li class="navelem"><a class="el" href="_e_q_m___p_w_r___fixed_content_8hxx.html">EQM_PWR_FixedContent.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx.js b/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx.js
new file mode 100644
index 0000000000000000000000000000000000000000..75f333bee9872da4182d71b98571a4ad97ec61b9
--- /dev/null
+++ b/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx.js
@@ -0,0 +1,5 @@
+var _e_q_m___p_w_r___fixed_content_8hxx =
+[
+    [ "EQM_PWR_FixedContent", "class_e_q_m___p_w_r___fixed_content.html", "class_e_q_m___p_w_r___fixed_content" ],
+    [ "PWR_Fixed_DMthPtr", "_e_q_m___p_w_r___fixed_content_8hxx.html#ad1a1c89aafe11ded171e07f55f9c13a6", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx_source.html b/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx_source.html
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--- a/documentation/doxygen/html/_e_q_m___p_w_r___fixed_content_8hxx_source.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_e_q_m___p_w_r___fixed_content_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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 </iframe>
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-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">EQM_PWR_FixedContent.hxx</div>  </div>
@@ -79,11 +98,15 @@ $(function() {
 <div class="ttc" id="class_c_l_a_s_s_logger_html"><div class="ttname"><a href="class_c_l_a_s_s_logger.html">CLASSLogger</a></div><div class="ttdoc">Object to handle output messages. </div><div class="ttdef"><b>Definition:</b> CLASSLogger.hxx:144</div></div>
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li><li class="navelem"><a class="el" href="_e_q_m___p_w_r___fixed_content_8hxx.html">EQM_PWR_FixedContent.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_e_q_m___p_w_r___m_l_p___m_o_x_8hxx_source.html b/documentation/doxygen/html/_e_q_m___p_w_r___m_l_p___m_o_x_8hxx_source.html
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--- a/documentation/doxygen/html/_e_q_m___p_w_r___m_l_p___m_o_x_8hxx_source.html
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@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
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  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_e_q_m___p_w_r___m_l_p___m_o_x_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
 </iframe>
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-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">EQM_PWR_MLP_MOX.hxx</div>  </div>
@@ -78,11 +97,15 @@ $(function() {
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 <div class="ttc" id="class_e_q_m___p_w_r___m_l_p___m_o_x_html"><div class="ttname"><a href="class_e_q_m___p_w_r___m_l_p___m_o_x.html">EQM_PWR_MLP_MOX</a></div><div class="ttdoc">Defines an EquivalenceModel based on neural network. </div><div class="ttdef"><b>Definition:</b> EQM_PWR_MLP_MOX.hxx:21</div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+</div><!-- doc-content -->
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_fe9b5ca3a00c5288ef59764c77e92014.html">Equivalence</a></li><li class="navelem"><a class="el" href="dir_02a837a31124570a733a5044b59a02e4.html">OLD</a></li><li class="navelem"><b>EQM_PWR_POL_UO2.hxx</b></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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diff --git a/documentation/doxygen/html/_equivalence_model_8hxx.html b/documentation/doxygen/html/_equivalence_model_8hxx.html
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+/* @license-end */</script>
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+[
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
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+<script type="text/javascript" src="navtree.js"></script>
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+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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+</div><!-- top -->
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+  <div id="nav-tree">
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
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+/* @license-end */
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+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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+<script type="text/javascript">
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+    <a href="http://www.doxygen.org/index.html">
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+/* @license-end */</script>
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-</a> 1.8.14
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
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+  $(document).ready(initResizable);
+/* @license-end */</script>
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+</div><!-- top -->
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+/* @license-end */
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
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+/* @license-end */</script>
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_physics_models_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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-</div>
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 <div class="header">
   <div class="headertitle">
 <div class="title">PhysicsModels.hxx</div>  </div>
@@ -90,11 +109,15 @@ $(function() {
 <div class="ttc" id="class_x_s_model_html"><div class="ttname"><a href="class_x_s_model.html">XSModel</a></div><div class="ttdoc">Defines a mean cross section predictor. </div><div class="ttdef"><b>Definition:</b> XSModel.hxx:48</div></div>
 <div class="ttc" id="class_physics_models_html_a1a7160d5eed9194a85137b49c81554fa"><div class="ttname"><a href="class_physics_models.html#a1a7160d5eed9194a85137b49c81554fa">PhysicsModels::GetPhysicsModels</a></div><div class="ttdeci">PhysicsModels * GetPhysicsModels()</div><div class="ttdoc">return the PhysicsModels </div><div class="ttdef"><b>Definition:</b> PhysicsModels.hxx:102</div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_physics_models_8hxx.html">PhysicsModels.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_pool_8hxx.html b/documentation/doxygen/html/_pool_8hxx.html
index 4d2b90b1ee6b5a3303e88db119164116ead47e5f..37c84acb25769a8947d13069978d64397ce701b7 100644
--- a/documentation/doxygen/html/_pool_8hxx.html
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 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_pool_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
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-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a> &#124;
@@ -101,11 +120,15 @@ typedef long long int&#160;</td><td class="memItemRight" valign="bottom"><b>cSec
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Header file for <a class="el" href="class_pool.html" title="Defines the spent fuel pool. ">Pool</a> class. </p>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_pool_8hxx.html">Pool.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_pool_8hxx.js b/documentation/doxygen/html/_pool_8hxx.js
new file mode 100644
index 0000000000000000000000000000000000000000..bd65fd86b80d60b988824e04ca1ac5219d8f8e1f
--- /dev/null
+++ b/documentation/doxygen/html/_pool_8hxx.js
@@ -0,0 +1,5 @@
+var _pool_8hxx =
+[
+    [ "Pool", "class_pool.html", "class_pool" ],
+    [ "cSecond", "_pool_8hxx.html#a97bb8e26e4a9de8c246240c32b980e6c", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/_pool_8hxx_source.html b/documentation/doxygen/html/_pool_8hxx_source.html
index bf0dd6b078d2cd3638415fce87f478bff98f6e22..6640fe98d78d13299a69d31d536030523ef55959 100644
--- a/documentation/doxygen/html/_pool_8hxx_source.html
+++ b/documentation/doxygen/html/_pool_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_pool_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
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-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">Pool.hxx</div>  </div>
@@ -89,11 +108,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_pool_8hxx.html">Pool.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_reactor_8hxx.html b/documentation/doxygen/html/_reactor_8hxx.html
index d44745e0d60a263b1e857e9c0c32bf380328b345..7deecb1da05a7c5bacc5a000e7c79f1cf5b19a77 100644
--- a/documentation/doxygen/html/_reactor_8hxx.html
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_reactor_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a>  </div>
@@ -96,11 +115,15 @@ Classes</h2></td></tr>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Header file for reactor classes. </p>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_reactor_8hxx.html">Reactor.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_reactor_8hxx_source.html b/documentation/doxygen/html/_reactor_8hxx_source.html
index 1b3c028ec7cf75d61fa18c33471cea07c4ee1dee..9f4bf605b1859b21b66306cc56ef9e4f8c772af0 100644
--- a/documentation/doxygen/html/_reactor_8hxx_source.html
+++ b/documentation/doxygen/html/_reactor_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_reactor_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">Reactor.hxx</div>  </div>
@@ -94,11 +113,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_reactor_8hxx.html">Reactor.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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 <a href="#nested-classes">Classes</a> &#124;
@@ -102,11 +121,15 @@ typedef long long int&#160;</td><td class="memItemRight" valign="bottom"><b>cSec
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Header file for <a class="el" href="class_separation_plant.html" title="Defines a SeparationPlant. ">SeparationPlant</a> class. </p>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_separation_plant_8hxx.html">SeparationPlant.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_separation_plant_8hxx.js b/documentation/doxygen/html/_separation_plant_8hxx.js
new file mode 100644
index 0000000000000000000000000000000000000000..6a53ff095b74b6da6f2595ea0a481224e1c49ce4
--- /dev/null
+++ b/documentation/doxygen/html/_separation_plant_8hxx.js
@@ -0,0 +1,5 @@
+var _separation_plant_8hxx =
+[
+    [ "SeparationPlant", "class_separation_plant.html", "class_separation_plant" ],
+    [ "cSecond", "_separation_plant_8hxx.html#a97bb8e26e4a9de8c246240c32b980e6c", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/_separation_plant_8hxx_source.html b/documentation/doxygen/html/_separation_plant_8hxx_source.html
index 84d7535e329a9495a30a233e346b9bde43d249b2..255c8dba723e81e020152783354683cc884ff218 100644
--- a/documentation/doxygen/html/_separation_plant_8hxx_source.html
+++ b/documentation/doxygen/html/_separation_plant_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_separation_plant_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">SeparationPlant.hxx</div>  </div>
@@ -89,11 +108,15 @@ $(function() {
 <div class="ttc" id="_storage_8hxx_html"><div class="ttname"><a href="_storage_8hxx.html">Storage.hxx</a></div><div class="ttdoc">Header file for Storage class. </div></div>
 <div class="ttc" id="class_c_l_a_s_s_back_end_html"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a></div><div class="ttdoc">Class defining the common properties of all back end fuel cycle facilities. </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.hxx:30</div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_separation_plant_8hxx.html">SeparationPlant.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_storage_8hxx.html b/documentation/doxygen/html/_storage_8hxx.html
index dca2a1e6b93cc85a93d2cd474a2ab963b34ed7d7..e7e6d2f84ee4514c2200ceca9c73c04a181ead79 100644
--- a/documentation/doxygen/html/_storage_8hxx.html
+++ b/documentation/doxygen/html/_storage_8hxx.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_storage_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a> &#124;
@@ -99,11 +118,15 @@ typedef long long int&#160;</td><td class="memItemRight" valign="bottom"><b>cSec
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Header file for <a class="el" href="class_storage.html" title="Defines a Storage object. ">Storage</a> class. </p>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_storage_8hxx.html">Storage.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_storage_8hxx.js b/documentation/doxygen/html/_storage_8hxx.js
new file mode 100644
index 0000000000000000000000000000000000000000..91d843dd44430e47262411db2931d5f1f04ad249
--- /dev/null
+++ b/documentation/doxygen/html/_storage_8hxx.js
@@ -0,0 +1,5 @@
+var _storage_8hxx =
+[
+    [ "Storage", "class_storage.html", "class_storage" ],
+    [ "cSecond", "_storage_8hxx.html#a97bb8e26e4a9de8c246240c32b980e6c", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/_storage_8hxx_source.html b/documentation/doxygen/html/_storage_8hxx_source.html
index 08a2effc4f3eb33b3fa528e022a3ed5ea89fc031..be67cad2382b7629c747a1757c7d8417511087a5 100644
--- a/documentation/doxygen/html/_storage_8hxx_source.html
+++ b/documentation/doxygen/html/_storage_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_storage_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">Storage.hxx</div>  </div>
@@ -84,11 +103,15 @@ $(function() {
 <div class="ttc" id="class_c_l_a_s_s_back_end_html"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a></div><div class="ttdoc">Class defining the common properties of all back end fuel cycle facilities. </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.hxx:30</div></div>
 <div class="ttc" id="class_c_l_a_s_s_back_end_html_a8ee7a2d9cad1bc2709944574539ba6eb"><div class="ttname"><a href="class_c_l_a_s_s_back_end.html#a8ee7a2d9cad1bc2709944574539ba6eb">CLASSBackEnd::SetIsStorageType</a></div><div class="ttdeci">void SetIsStorageType(bool val=true)</div><div class="ttdoc">Set the fIsStorage bool. </div><div class="ttdef"><b>Definition:</b> CLASSBackEnd.hxx:161</div></div>
 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_storage_8hxx.html">Storage.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_string_line_8hxx.html b/documentation/doxygen/html/_string_line_8hxx.html
index f0f250721ebdfa41650d44cb2d5b46123743e3ea..d7ce4767fb648e5fc9512b6c07ba48048b8afc83 100644
--- a/documentation/doxygen/html/_string_line_8hxx.html
+++ b/documentation/doxygen/html/_string_line_8hxx.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_string_line_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_3db07c0cf0695f37bc72316a009affeb.html">external</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a>  </div>
@@ -94,11 +113,15 @@ Classes</h2></td></tr>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Header file for StingLine class. </p>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_3db07c0cf0695f37bc72316a009affeb.html">external</a></li><li class="navelem"><a class="el" href="_string_line_8hxx.html">StringLine.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_string_line_8hxx_source.html b/documentation/doxygen/html/_string_line_8hxx_source.html
index 207d4e6929a8499d63758d3d7547dfa9c605e04a..c8fd070671b25f9c0c0ba24e659debde09d681ab 100644
--- a/documentation/doxygen/html/_string_line_8hxx_source.html
+++ b/documentation/doxygen/html/_string_line_8hxx_source.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_string_line_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 <div id="MSearchSelectWindow"
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_3db07c0cf0695f37bc72316a009affeb.html">external</a></li><li class="navelem"><a class="el" href="_string_line_8hxx.html">StringLine.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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diff --git a/documentation/doxygen/html/_x_s_m___c_l_o_s_e_s_t_8hxx.html b/documentation/doxygen/html/_x_s_m___c_l_o_s_e_s_t_8hxx.html
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+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_x_s_m___c_l_o_s_e_s_t_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
 </iframe>
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-</div>
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 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a> &#124;
@@ -104,11 +123,15 @@ typedef long long int&#160;</td><td class="memItemRight" valign="bottom"><b>cSec
 <dl class="section author"><dt>Authors</dt><dd>BaM,BLG </dd></dl>
 <dl class="section version"><dt>Version</dt><dd>1.0 </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_daaefb8089b47b0b0033b3aa58585ab4.html">XS</a></li><li class="navelem"><a class="el" href="_x_s_m___c_l_o_s_e_s_t_8hxx.html">XSM_CLOSEST.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_x_s_m___c_l_o_s_e_s_t_8hxx.js b/documentation/doxygen/html/_x_s_m___c_l_o_s_e_s_t_8hxx.js
new file mode 100644
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--- /dev/null
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@@ -0,0 +1,5 @@
+var _x_s_m___c_l_o_s_e_s_t_8hxx =
+[
+    [ "XSM_CLOSEST", "class_x_s_m___c_l_o_s_e_s_t.html", "class_x_s_m___c_l_o_s_e_s_t" ],
+    [ "cSecond", "_x_s_m___c_l_o_s_e_s_t_8hxx.html#a97bb8e26e4a9de8c246240c32b980e6c", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/_x_s_m___c_l_o_s_e_s_t_8hxx_source.html b/documentation/doxygen/html/_x_s_m___c_l_o_s_e_s_t_8hxx_source.html
index 517ee90cbb94e6bd790f83b9da5c4624b9442164..fec82741c15246365a706cb522d99ca600f34f10 100644
--- a/documentation/doxygen/html/_x_s_m___c_l_o_s_e_s_t_8hxx_source.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_x_s_m___c_l_o_s_e_s_t_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_daaefb8089b47b0b0033b3aa58585ab4.html">XS</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">XSM_CLOSEST.hxx</div>  </div>
@@ -90,11 +109,15 @@ $(function() {
 <div class="ttc" id="class_x_s_model_html"><div class="ttname"><a href="class_x_s_model.html">XSModel</a></div><div class="ttdoc">Defines a mean cross section predictor. </div><div class="ttdef"><b>Definition:</b> XSModel.hxx:48</div></div>
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_daaefb8089b47b0b0033b3aa58585ab4.html">XS</a></li><li class="navelem"><a class="el" href="_x_s_m___c_l_o_s_e_s_t_8hxx.html">XSM_CLOSEST.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_x_s_m___m_l_p_8hxx.html b/documentation/doxygen/html/_x_s_m___m_l_p_8hxx.html
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--- a/documentation/doxygen/html/_x_s_m___m_l_p_8hxx.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
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  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_x_s_m___m_l_p_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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-</div>
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 <div class="header">
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 BLG </dd></dl>
 <dl class="section version"><dt>Version</dt><dd>1.0 </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_daaefb8089b47b0b0033b3aa58585ab4.html">XS</a></li><li class="navelem"><a class="el" href="_x_s_m___m_l_p_8hxx.html">XSM_MLP.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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diff --git a/documentation/doxygen/html/_x_s_m___m_l_p_8hxx.js b/documentation/doxygen/html/_x_s_m___m_l_p_8hxx.js
new file mode 100644
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--- /dev/null
+++ b/documentation/doxygen/html/_x_s_m___m_l_p_8hxx.js
@@ -0,0 +1,6 @@
+var _x_s_m___m_l_p_8hxx =
+[
+    [ "XSM_MLP", "class_x_s_m___m_l_p.html", "class_x_s_m___m_l_p" ],
+    [ "cSecond", "_x_s_m___m_l_p_8hxx.html#a97bb8e26e4a9de8c246240c32b980e6c", null ],
+    [ "XS_MLP_DMthPtr", "_x_s_m___m_l_p_8hxx.html#a7cbe07d5acd1dd5ee1a63cb50ea10e45", null ]
+];
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--- a/documentation/doxygen/html/_x_s_m___m_l_p_8hxx_source.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_x_s_m___m_l_p_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">XSM_MLP.hxx</div>  </div>
@@ -80,11 +99,15 @@ $(function() {
 <div class="ttc" id="class_c_l_a_s_s_logger_html"><div class="ttname"><a href="class_c_l_a_s_s_logger.html">CLASSLogger</a></div><div class="ttdoc">Object to handle output messages. </div><div class="ttdef"><b>Definition:</b> CLASSLogger.hxx:144</div></div>
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_b5c61903c468e8ddf52447ff71d9bc14.html">Model</a></li><li class="navelem"><a class="el" href="dir_daaefb8089b47b0b0033b3aa58585ab4.html">XS</a></li><li class="navelem"><a class="el" href="_x_s_m___m_l_p_8hxx.html">XSM_MLP.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_x_s_model_8hxx.html b/documentation/doxygen/html/_x_s_model_8hxx.html
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
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  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_x_s_model_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
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-<div id="nav-path" class="navpath">
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-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a> &#124;
@@ -104,11 +123,15 @@ typedef void(XSModel::*&#160;</td><td class="memItemRight" valign="bottom"><b>XS
 BLG </dd></dl>
 <dl class="section version"><dt>Version</dt><dd>2 </dd></dl>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_x_s_model_8hxx.html">XSModel.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_x_s_model_8hxx.js b/documentation/doxygen/html/_x_s_model_8hxx.js
new file mode 100644
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--- /dev/null
+++ b/documentation/doxygen/html/_x_s_model_8hxx.js
@@ -0,0 +1,5 @@
+var _x_s_model_8hxx =
+[
+    [ "XSModel", "class_x_s_model.html", "class_x_s_model" ],
+    [ "XSM_MthPtr", "_x_s_model_8hxx.html#ad2594603ca5778279d3f429814200693", null ]
+];
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--- a/documentation/doxygen/html/_x_s_model_8hxx_source.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_x_s_model_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
 </iframe>
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-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
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 <div class="header">
   <div class="headertitle">
 <div class="title">XSModel.hxx</div>  </div>
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_x_s_model_8hxx.html">XSModel.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_z_a_i_8hxx.html b/documentation/doxygen/html/_z_a_i_8hxx.html
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--- a/documentation/doxygen/html/_z_a_i_8hxx.html
+++ b/documentation/doxygen/html/_z_a_i_8hxx.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_z_a_i_8hxx.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,11 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#nested-classes">Classes</a>  </div>
@@ -92,11 +111,15 @@ Classes</h2></td></tr>
 <a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 <div class="textblock"><p>Header file for <a class="el" href="class_z_a_i.html" title="Defines a nucleus. ">ZAI</a> classes. </p>
 </div></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_z_a_i_8hxx.html">ZAI.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_z_a_i_8hxx_source.html b/documentation/doxygen/html/_z_a_i_8hxx_source.html
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--- a/documentation/doxygen/html/_z_a_i_8hxx_source.html
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 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_z_a_i_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,11 +86,6 @@ $(function() {
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-<div id="nav-path" class="navpath">
-  <ul>
-<li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li>  </ul>
-</div>
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">ZAI.hxx</div>  </div>
@@ -83,11 +102,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_z_a_i_8hxx.html">ZAI.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/_z_a_i_heat_8hxx.html b/documentation/doxygen/html/_z_a_i_heat_8hxx.html
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 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+/* @license-end */
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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diff --git a/documentation/doxygen/html/_z_a_i_mass_8hxx.html b/documentation/doxygen/html/_z_a_i_mass_8hxx.html
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+/* @license-end */</script>
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+/* @license-end */
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+<script type="text/javascript" src="navtree.js"></script>
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+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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 /* @license-end */</script>
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+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
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+<script type="text/javascript">
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+/* @license-end */
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+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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+/* @license-end */</script>
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+/* @license-end */
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('_z_a_i_tox_8hxx_source.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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-</div>
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 <div class="header">
   <div class="headertitle">
 <div class="title">ZAITox.hxx</div>  </div>
@@ -79,11 +98,15 @@ $(function() {
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 </div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_b2f33c71d4aa5e7af42a1ca61ff5af1b.html">source</a></li><li class="navelem"><a class="el" href="dir_8ee1a5e78eaec319fe5d64075812fc61.html">include</a></li><li class="navelem"><a class="el" href="_z_a_i_tox_8hxx.html">ZAITox.hxx</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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diff --git a/documentation/doxygen/html/annotated.html b/documentation/doxygen/html/annotated.html
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
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 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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@@ -49,6 +56,22 @@ $(function() {
 /* @license-end */</script>
 <div id="main-nav"></div>
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+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('annotated.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -118,11 +141,14 @@ $(function() {
 </table>
 </div><!-- directory -->
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+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/annotated_dup.js b/documentation/doxygen/html/annotated_dup.js
new file mode 100644
index 0000000000000000000000000000000000000000..3fcac89d60da6017188b59320a4936483d9b096b
--- /dev/null
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@@ -0,0 +1,48 @@
+var annotated_dup =
+[
+    [ "CLASSBackEnd", "class_c_l_a_s_s_back_end.html", "class_c_l_a_s_s_back_end" ],
+    [ "CLASSFacility", "class_c_l_a_s_s_facility.html", "class_c_l_a_s_s_facility" ],
+    [ "CLASSLogger", "class_c_l_a_s_s_logger.html", "class_c_l_a_s_s_logger" ],
+    [ "CLASSNucleiFiliation", "class_c_l_a_s_s_nuclei_filiation.html", "class_c_l_a_s_s_nuclei_filiation" ],
+    [ "CLASSObject", "class_c_l_a_s_s_object.html", "class_c_l_a_s_s_object" ],
+    [ "CLASSReader", "class_c_l_a_s_s_reader.html", "class_c_l_a_s_s_reader" ],
+    [ "DecayDataBank", "class_decay_data_bank.html", "class_decay_data_bank" ],
+    [ "DynamicalSystem", "class_dynamical_system.html", "class_dynamical_system" ],
+    [ "EQ_OneParameter", "class_e_q___one_parameter.html", "class_e_q___one_parameter" ],
+    [ "EQM_ADS_MLP_FixedRatioPuAM", "class_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m.html", "class_e_q_m___a_d_s___m_l_p___fixed_ratio_pu_a_m" ],
+    [ "EQM_ADS_MLP_RatioPuAM", "class_e_q_m___a_d_s___m_l_p___ratio_pu_a_m.html", "class_e_q_m___a_d_s___m_l_p___ratio_pu_a_m" ],
+    [ "EQM_FBR_BakerRoss_MOX", "class_e_q_m___f_b_r___baker_ross___m_o_x.html", "class_e_q_m___f_b_r___baker_ross___m_o_x" ],
+    [ "EQM_FBR_MLP_Keff", "class_e_q_m___f_b_r___m_l_p___keff.html", "class_e_q_m___f_b_r___m_l_p___keff" ],
+    [ "EQM_MLP_Kinf", "class_e_q_m___m_l_p___kinf.html", "class_e_q_m___m_l_p___kinf" ],
+    [ "EQM_MLP_PWR_MOxEUS", "class_e_q_m___m_l_p___p_w_r___m_ox_e_u_s.html", "class_e_q_m___m_l_p___p_w_r___m_ox_e_u_s" ],
+    [ "EQM_PWR_FixedContent", "class_e_q_m___p_w_r___fixed_content.html", "class_e_q_m___p_w_r___fixed_content" ],
+    [ "EQM_PWR_MLP_MOX", "class_e_q_m___p_w_r___m_l_p___m_o_x.html", "class_e_q_m___p_w_r___m_l_p___m_o_x" ],
+    [ "EQM_PWR_MLP_MOX_AM", "class_e_q_m___p_w_r___m_l_p___m_o_x___a_m.html", "class_e_q_m___p_w_r___m_l_p___m_o_x___a_m" ],
+    [ "EQM_PWR_POL_UO2", "class_e_q_m___p_w_r___p_o_l___u_o2.html", "class_e_q_m___p_w_r___p_o_l___u_o2" ],
+    [ "EquivalenceModel", "class_equivalence_model.html", "class_equivalence_model" ],
+    [ "EvolutionData", "class_evolution_data.html", "class_evolution_data" ],
+    [ "FabricationPlant", "class_fabrication_plant.html", "class_fabrication_plant" ],
+    [ "IM_Matrix", "class_i_m___matrix.html", "class_i_m___matrix" ],
+    [ "IM_RK4", "class_i_m___r_k4.html", "class_i_m___r_k4" ],
+    [ "IrradiationModel", "class_irradiation_model.html", "class_irradiation_model" ],
+    [ "IsotopicVector", "class_isotopic_vector.html", "class_isotopic_vector" ],
+    [ "LogType", "class_log_type.html", "class_log_type" ],
+    [ "my_tolower", "structmy__tolower.html", "structmy__tolower" ],
+    [ "PhysicsModels", "class_physics_models.html", "class_physics_models" ],
+    [ "Pool", "class_pool.html", "class_pool" ],
+    [ "Reactor", "class_reactor.html", "class_reactor" ],
+    [ "ReactorModel", "class_reactor_model.html", "class_reactor_model" ],
+    [ "ReactorScheduler", "class_reactor_scheduler.html", "class_reactor_scheduler" ],
+    [ "Scenario", "class_scenario.html", "class_scenario" ],
+    [ "ScheduleEntry", "class_schedule_entry.html", "class_schedule_entry" ],
+    [ "SeparationPlant", "class_separation_plant.html", "class_separation_plant" ],
+    [ "Storage", "class_storage.html", "class_storage" ],
+    [ "StringLine", "class_string_line.html", null ],
+    [ "XSM_CLOSEST", "class_x_s_m___c_l_o_s_e_s_t.html", "class_x_s_m___c_l_o_s_e_s_t" ],
+    [ "XSM_MLP", "class_x_s_m___m_l_p.html", "class_x_s_m___m_l_p" ],
+    [ "XSModel", "class_x_s_model.html", "class_x_s_model" ],
+    [ "ZAI", "class_z_a_i.html", "class_z_a_i" ],
+    [ "ZAIHeat", "class_z_a_i_heat.html", "class_z_a_i_heat" ],
+    [ "ZAIMass", "class_z_a_i_mass.html", "class_z_a_i_mass" ],
+    [ "ZAITox", "class_z_a_i_tox.html", "class_z_a_i_tox" ]
+];
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--- a/documentation/doxygen/html/class_c_l_a_s_s_back_end-members.html
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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@@ -48,6 +55,23 @@ $(function() {
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 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_c_l_a_s_s_back_end.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 <div id="MSearchSelectWindow"
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 <div class="title">CLASSBackEnd Member List</div>  </div>
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+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
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diff --git a/documentation/doxygen/html/class_c_l_a_s_s_back_end.html b/documentation/doxygen/html/class_c_l_a_s_s_back_end.html
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
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 /* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
+    </div>
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+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_c_l_a_s_s_back_end.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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-<hr class="footer"/><address class="footer"><small>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_c_l_a_s_s_back_end.html">CLASSBackEnd</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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+++ b/documentation/doxygen/html/class_c_l_a_s_s_back_end.js
@@ -0,0 +1,28 @@
+var class_c_l_a_s_s_back_end =
+[
+    [ "CLASSBackEnd", "class_c_l_a_s_s_back_end.html#a8fccc268ae82c982e4755d47ffc0fafc", null ],
+    [ "CLASSBackEnd", "class_c_l_a_s_s_back_end.html#aea0203f014d131f401326d676e952002", null ],
+    [ "CLASSBackEnd", "class_c_l_a_s_s_back_end.html#a4822e8789f7cabf4cfe5e68f1cf278a0", null ],
+    [ "AddIV", "class_c_l_a_s_s_back_end.html#abfb18f26955392909a919123aa0c5a0f", null ],
+    [ "ApplyZAIThreshold", "class_c_l_a_s_s_back_end.html#ae0a7fb563217bc0fbaff2cf211e6047c", null ],
+    [ "ClearIVArray", "class_c_l_a_s_s_back_end.html#a58c821ef59b4cd0877efd17866ba6a27", null ],
+    [ "Evolution", "class_c_l_a_s_s_back_end.html#a4e6f213f1c168b671a63b37ee6d7598f", null ],
+    [ "GetDecay", "class_c_l_a_s_s_back_end.html#af526093bcfb6d3ae076be75c07621b94", null ],
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+    [ "SetInsideIV", "class_c_l_a_s_s_facility.html#addd61f61648dfcc3c4c8bf9d6f2d93c9", null ],
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+    [ "SetShutDownTime", "class_c_l_a_s_s_facility.html#ab2335b2e26b6f16816515a437ea6c8bb", null ],
+    [ "fCumulativeIVIn", "class_c_l_a_s_s_facility.html#a61fa79846640e2e9585cf14f2388ddcd", null ],
+    [ "fCumulativeIVOut", "class_c_l_a_s_s_facility.html#ac9829145357ff0df1892bb6524bc13d3", null ],
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+<script type="text/javascript">
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+       class="ui-resizable-handle">
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+<script type="text/javascript">
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+/* @license-end */
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+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_c_l_a_s_s_logger.html">CLASSLogger</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+[
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+    [ "GetMaxOutPutLVL", "class_c_l_a_s_s_logger.html#a2679b91f67187e54b94e9854584e88b3", null ],
+    [ "GetVerboseLVL", "class_c_l_a_s_s_logger.html#aecb70ad24ef2eec736aa2545ba523530", null ],
+    [ "I", "class_c_l_a_s_s_logger.html#aa057c50facd2da53e67ed36c6f7abacc", null ],
+    [ "W", "class_c_l_a_s_s_logger.html#a0cdc66f9531668c39e8422ca76a8d088", null ]
+];
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+<script type="text/javascript" src="navtree.js"></script>
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+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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@@ -48,6 +55,23 @@ $(function() {
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 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
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+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_c_l_a_s_s_nuclei_filiation.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+<script type="text/javascript" src="navtree.js"></script>
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+/* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
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+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
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+$(document).ready(function(){initNavTree('class_c_l_a_s_s_nuclei_filiation.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_c_l_a_s_s_nuclei_filiation.html">CLASSNucleiFiliation</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+    [ "~CLASSNucleiFiliation", "class_c_l_a_s_s_nuclei_filiation.html#aa4eb7f09503f9dec3754f6064eaa833a", null ],
+    [ "Add", "class_c_l_a_s_s_nuclei_filiation.html#a2148001017c760634432042a9faaf452", null ],
+    [ "FiliationCleanUp", "class_c_l_a_s_s_nuclei_filiation.html#afd72bcd97d9d18c9cdcf9fa53ebc8d62", null ],
+    [ "GetArtificialDecay", "class_c_l_a_s_s_nuclei_filiation.html#afd106e35330361c1469988568f5b6ea9", null ],
+    [ "GetFiliation", "class_c_l_a_s_s_nuclei_filiation.html#a38256e160316090a0a067204fc7c0dc0", null ],
+    [ "GetNucleiFIliation", "class_c_l_a_s_s_nuclei_filiation.html#a8ecaa1100f711bf1f1feb00da6f89aeb", null ],
+    [ "GetZAIList", "class_c_l_a_s_s_nuclei_filiation.html#a3661ac19d5bea59e5c7c44339b565a98", null ],
+    [ "NormalizeBranchingRatio", "class_c_l_a_s_s_nuclei_filiation.html#a123edbbf5074c2407cf051190e9090b0", null ],
+    [ "NormalizeBranchingRatio", "class_c_l_a_s_s_nuclei_filiation.html#a3239f254859cd1aa6ce552dcdc525a77", null ],
+    [ "SelfFiliationCleanUp", "class_c_l_a_s_s_nuclei_filiation.html#acc454b48f45804e304879bccd3bf8d14", null ],
+    [ "SetNucleiFIliation", "class_c_l_a_s_s_nuclei_filiation.html#acc519430546d5d1ef531ba5befcaf053", null ],
+    [ "size", "class_c_l_a_s_s_nuclei_filiation.html#a08c77ba8919e7d11e7534a989d53be28", null ],
+    [ "fNucleiFiliation", "class_c_l_a_s_s_nuclei_filiation.html#a66d51505c12608e91ab72d489dbfc774", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/class_c_l_a_s_s_object-members.html b/documentation/doxygen/html/class_c_l_a_s_s_object-members.html
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--- a/documentation/doxygen/html/class_c_l_a_s_s_object-members.html
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
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+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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@@ -48,6 +55,23 @@ $(function() {
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
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+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_c_l_a_s_s_object.html','');});
+/* @license-end */
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+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+  </ul>
+</div>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
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+  $(document).ready(initResizable);
+/* @license-end */</script>
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+       class="ui-resizable-handle">
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+<script type="text/javascript">
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+$(document).ready(function(){initNavTree('class_c_l_a_s_s_object.html','');});
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+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_c_l_a_s_s_object.html">CLASSObject</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+  </ul>
+</div>
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+    [ "GetLog", "class_c_l_a_s_s_object.html#a4aad9e3dbf8a609c9c815d8f769b56fa", null ],
+    [ "SetLog", "class_c_l_a_s_s_object.html#a31f517cfa75477d710b16256d260bb69", null ],
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+];
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+/* @license-end */</script>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_c_l_a_s_s_reader.html','');});
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+  <ul>
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+    <a href="http://www.doxygen.org/index.html">
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
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+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_c_l_a_s_s_reader.html','');});
+/* @license-end */
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+<div id="doc-content">
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-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_c_l_a_s_s_reader.html">CLASSReader</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+  </ul>
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+    [ "CLASSReader", "class_c_l_a_s_s_reader.html#a07a88caabd47641c0e4e3de30933ef85", null ],
+    [ "CLASSReader", "class_c_l_a_s_s_reader.html#afe0f241304590d065c4e3c8b27195d08", null ],
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+    [ "AddVariable", "class_c_l_a_s_s_reader.html#a1d007f1640047ff43369f7fd8254aeea", null ],
+    [ "BookMVA", "class_c_l_a_s_s_reader.html#ae035fdc2e655dbb767491b1dd1816398", null ],
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+];
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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 <script type="text/javascript" src="search/search.js"></script>
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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@@ -48,6 +55,23 @@ $(function() {
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_decay_data_bank.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 </table></div><!-- contents -->
+</div><!-- doc-content -->
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+  </ul>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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+</div><!-- top -->
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+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
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+  <div id="splitbar" style="-moz-user-select:none;" 
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+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_decay_data_bank.html','');});
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+    [ "GetDecayDataBank", "class_decay_data_bank.html#a9f1c7bd3b9f05ec31530db1d3324fab6", null ],
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+    [ "SetDataBaseIndex", "class_decay_data_bank.html#aeec5775cc59bad8e3b70c4b0d1b16def", null ],
+    [ "SetDecayDataBank", "class_decay_data_bank.html#ab1f177a0fc66d50a7cabe923716b78be", null ],
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+    [ "fDataBaseIndex", "class_decay_data_bank.html#a7538248021f1073f49f6c97d4d78286a", null ],
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
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+/* @license-end */</script>
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+/* @license-end */</script>
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+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+/* @license-end */
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+    <li class="navelem"><a class="el" href="class_e_q_m___m_l_p___kinf.html">EQM_MLP_Kinf</a></li>
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+  </ul>
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+    [ "SetPCMPrecision", "class_e_q_m___m_l_p___kinf.html#ae46a0bbd4324f0a1fd1682e105bcaf4e", null ]
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+<script type="text/javascript" src="navtree.js"></script>
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+/* @license-end */</script>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
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+/* @license-end */</script>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
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 <!-- start footer part -->
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
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+    <a href="http://www.doxygen.org/index.html">
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-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+    <li class="navelem"><a class="el" href="class_e_q_m___p_w_r___fixed_content.html">EQM_PWR_FixedContent</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
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+/* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
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+<script type="text/javascript">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
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+      <div id="nav-sync" class="sync"></div>
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+<script type="text/javascript">
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+/* @license-end */
+</script>
+<div id="doc-content">
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-<hr class="footer"/><address class="footer"><small>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_e_q_m___p_w_r___m_l_p___m_o_x.html">EQM_PWR_MLP_MOX</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
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+var class_e_q_m___p_w_r___m_l_p___m_o_x =
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
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+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
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@@ -48,6 +55,23 @@ $(function() {
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 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
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+  </div>
+</div>
+<script type="text/javascript">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+  <ul>
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+/* @license-end */</script>
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+<script type="text/javascript">
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+  <ul>
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+$(document).ready(function(){initNavTree('class_evolution_data.html','');});
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+    <a href="http://www.doxygen.org/index.html">
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
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+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
+    </div>
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+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_isotopic_vector.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 </table></div><!-- contents -->
+</div><!-- doc-content -->
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_isotopic_vector.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+    [ "GetZAIIsotopicQuantity", "class_isotopic_vector.html#a8f7b6b2d1cb6d7759275caa51d222eb9", null ],
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+    [ "GetZAIList", "class_isotopic_vector.html#a97abb186b0773f7caef38db4007981c9", null ],
+    [ "GetZAIQuantity", "class_isotopic_vector.html#aab62df267823fe7980d8ca3ddec22a16", null ],
+    [ "Initiatlize", "class_isotopic_vector.html#a02ac7026156690dbad46203762234256", null ],
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+    [ "Remove", "class_isotopic_vector.html#a4d58caf35dfa54a38155a7340ef1102b", null ],
+    [ "sPrint", "class_isotopic_vector.html#ad2dd895004ae51c4f831db3113d313bb", null ],
+    [ "Write", "class_isotopic_vector.html#a72f1549a7bf952727d306693cc2b1c91", null ],
+    [ "fIsotopicQuantity", "class_isotopic_vector.html#a7908d48ae0f78b1454eb8a0cc01cd621", null ],
+    [ "fIsotopicQuantityNeeded", "class_isotopic_vector.html#a00bb90a8b08db19d5eba9530c5133e32", null ]
+];
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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 <script type="text/javascript" src="search/searchdata.js"></script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_log_type.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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+</div><!-- doc-content -->
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
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  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_log_type.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 <div id="MSearchSelectWindow"
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+    <a href="http://www.doxygen.org/index.html">
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+  </ul>
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+];
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+<script type="text/javascript">
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+  <ul>
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
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+    [ "~PhysicsModels", "class_physics_models.html#af3fc4828ce27b312061363d9c947fc66", null ],
+    [ "GenerateEvolutionData", "class_physics_models.html#a46a3e8a8e6bbaa2e6f9bfa915b47f288", null ],
+    [ "GetEquivalenceModel", "class_physics_models.html#a9fe59ae6d572a9641bdaf1ab4fc5cb21", null ],
+    [ "GetIrradiationModel", "class_physics_models.html#a86bf9c2277e93f091c3fbb6ac978f33b", null ],
+    [ "GetPhysicsModels", "class_physics_models.html#a1a7160d5eed9194a85137b49c81554fa", null ],
+    [ "GetXSModel", "class_physics_models.html#acf3ee19f9ff8e366884fcaf3ef286f64", null ]
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+/* @license-end */</script>
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+      <div id="nav-sync" class="sync"></div>
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+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
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+/* @license-end */
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+  <ul>
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+<script type="text/javascript">
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+<script type="text/javascript" src="navtree.js"></script>
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+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
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@@ -48,6 +55,23 @@ $(function() {
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 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
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+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
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+<script type="text/javascript">
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+$(document).ready(function(){initNavTree('class_schedule_entry.html','');});
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
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+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
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+  $(document).ready(initResizable);
+/* @license-end */</script>
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+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_schedule_entry.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 <li>source/src/ReactorScheduler.cxx</li>
 </ul>
 </div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_schedule_entry.html">ScheduleEntry</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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+    [ "GetPower", "class_schedule_entry.html#a466c2037aa4dadfbc2b27144abf1f7ae", null ],
+    [ "GetReactorModel", "class_schedule_entry.html#a016ba4f7d125744c52f399b579faec37", null ]
+];
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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 <script type="text/javascript" src="search/search.js"></script>
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@@ -48,6 +55,23 @@ $(function() {
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 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_separation_plant.html','');});
+/* @license-end */
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+<div id="doc-content">
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
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+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
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+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_separation_plant.html','');});
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-<img class="footer" src="doxygen.png" alt="doxygen"/>
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_separation_plant.html">SeparationPlant</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
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+    [ "ClassDef", "class_separation_plant.html#ab849237d580875e24b254a0f9c3211a8", null ],
+    [ "GetCoolingStartingTime", "class_separation_plant.html#a94773906b0f5a27e497b659d5ef7049e", null ],
+    [ "GetPutToWaste", "class_separation_plant.html#a7a1393c6c61cd1659d15d0213972fa7d", null ],
+    [ "GetTheBackEndTimePath", "class_separation_plant.html#a4df8d003062b72514ff7f54845bf141b", null ],
+    [ "SetBackEndDestination", "class_separation_plant.html#a7934b31667c24d198022c73f29e1a3a3", null ],
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+    [ "fDestinationStorageIV", "class_separation_plant.html#a51cdd4c36da42c8db077bd0f4508c7d5", null ],
+    [ "fDestinationStorageStartingTime", "class_separation_plant.html#a08bfbf1ce505adc5c6193083577aeaa4", null ],
+    [ "fPutToWaste", "class_separation_plant.html#a41049f8a08ed80b83d8680c18414752d", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/class_storage-members.html b/documentation/doxygen/html/class_storage-members.html
index f389e50680aecede3cf9d20b36efa831fbcdfb59..ae88c877eeff6ada89461c3ee05152be9a1f3834 100644
--- a/documentation/doxygen/html/class_storage-members.html
+++ b/documentation/doxygen/html/class_storage-members.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_storage.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">Storage Member List</div>  </div>
@@ -152,11 +175,14 @@ $(function() {
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   <tr><td class="entry"><a class="el" href="class_storage.html#a73cf30f0a34250396f9eabee7dc5c93d">~Storage</a>()</td><td class="entry"><a class="el" href="class_storage.html">Storage</a></td><td class="entry"></td></tr>
 </table></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_storage.html b/documentation/doxygen/html/class_storage.html
index aadf49a0dbbc84826de1624814886153301b937a..5d47a83b86ca8499aecf6419c89383153b53f8f3 100644
--- a/documentation/doxygen/html/class_storage.html
+++ b/documentation/doxygen/html/class_storage.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_storage.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
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 <li>source/src/Storage.cxx</li>
 </ul>
 </div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_storage.html">Storage</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_storage.js b/documentation/doxygen/html/class_storage.js
new file mode 100644
index 0000000000000000000000000000000000000000..acd3dada0f36f83c35f14a1c5db6dbb622bf6038
--- /dev/null
+++ b/documentation/doxygen/html/class_storage.js
@@ -0,0 +1,17 @@
+var class_storage =
+[
+    [ "Storage", "class_storage.html#a80ef6af5e4c9fd4424ae16e808d05291", null ],
+    [ "Storage", "class_storage.html#a0f2bfa61e020f4e4eedae1e3d590bae8", null ],
+    [ "Storage", "class_storage.html#a994600f5213b0277697382aa68ab5916", null ],
+    [ "~Storage", "class_storage.html#a73cf30f0a34250396f9eabee7dc5c93d", null ],
+    [ "AddIV", "class_storage.html#ae39c4685923f3344bbd8ab4f7a4281bf", null ],
+    [ "AddToStock", "class_storage.html#a9604b0494587ed722a1da8f4e7a44396", null ],
+    [ "ClassDef", "class_storage.html#af6b52ba63e5d0672462d9c19e2627a19", null ],
+    [ "Evolution", "class_storage.html#aae6e3572e91efbd22a4da5b25680713b", null ],
+    [ "RemoveEmptyStocks", "class_storage.html#a096798223457ed068b957f7176bb28ec", null ],
+    [ "SetIsStorageType", "class_storage.html#a8ee7a2d9cad1bc2709944574539ba6eb", null ],
+    [ "StorageEvolution", "class_storage.html#a1757d6a034b6d9e3ee3613a110b7d664", null ],
+    [ "TakeFractionFromStock", "class_storage.html#ad4483ea1d958c68bfa444b56c0eda5e7", null ],
+    [ "TakeFromStock", "class_storage.html#ae247e08687d1945bc386228d7a58291d", null ],
+    [ "Write", "class_storage.html#aa042c7e3de487d4b91e469d9d03a2b1e", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/class_string_line-members.html b/documentation/doxygen/html/class_string_line-members.html
index b94de74b1a1b8ed16d6084897f670dd46accd9a4..2c7636c7eb5dce06f5847efde3d36a37e30550e1 100644
--- a/documentation/doxygen/html/class_string_line-members.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_string_line.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">StringLine Member List</div>  </div>
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 </table></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_string_line.html b/documentation/doxygen/html/class_string_line.html
index 5cfd279c0a6be213502ac335c03f98bb1814374f..9dc4c989694568048be3663fbbf7fa70ddbfd391 100644
--- a/documentation/doxygen/html/class_string_line.html
+++ b/documentation/doxygen/html/class_string_line.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_string_line.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#pub-static-methods">Static Public Member Functions</a> &#124;
@@ -598,11 +621,15 @@ template&lt;class T &gt; </div>
 <li>source/external/<a class="el" href="_string_line_8hxx_source.html">StringLine.hxx</a></li>
 </ul>
 </div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_string_line.html">StringLine</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t-members.html b/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t-members.html
index 6457bdd4ab61b4114af2445659f8e9de3b3b8d18..43700d7325efce66584b1fe8851247113cc9b7b0 100644
--- a/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t-members.html
+++ b/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t-members.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_x_s_m___c_l_o_s_e_s_t.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">XSM_CLOSEST Member List</div>  </div>
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 </table></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t.html b/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t.html
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--- a/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t.html
+++ b/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
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@@ -48,6 +55,23 @@ $(function() {
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 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_x_s_m___c_l_o_s_e_s_t.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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 <li>source/Model/XS/XSM_CLOSEST.cxx</li>
 </ul>
 </div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_x_s_m___c_l_o_s_e_s_t.html">XSM_CLOSEST</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t.js b/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t.js
new file mode 100644
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--- /dev/null
+++ b/documentation/doxygen/html/class_x_s_m___c_l_o_s_e_s_t.js
@@ -0,0 +1,23 @@
+var class_x_s_m___c_l_o_s_e_s_t =
+[
+    [ "XSM_CLOSEST", "class_x_s_m___c_l_o_s_e_s_t.html#a0fce5f4cfbe6b1fb41b95e344098accd", null ],
+    [ "XSM_CLOSEST", "class_x_s_m___c_l_o_s_e_s_t.html#a73ff830253a83825154ba41e8f7856dd", null ],
+    [ "~XSM_CLOSEST", "class_x_s_m___c_l_o_s_e_s_t.html#a9bc76c0a93fa72eaf1a0b6eb79022a29", null ],
+    [ "CalculateDistanceParameter", "class_x_s_m___c_l_o_s_e_s_t.html#ac3aa8a6d9c799cbbb448f83fc53fbf1a", null ],
+    [ "GetBurnUpRange", "class_x_s_m___c_l_o_s_e_s_t.html#ad34e7aae94058bbc603b61f3c9613824", null ],
+    [ "GetCrossSections", "class_x_s_m___c_l_o_s_e_s_t.html#acc90da5cf1117c26afad7cbab727745d", null ],
+    [ "GetDataBaseIndex", "class_x_s_m___c_l_o_s_e_s_t.html#abaa8a188e128d0a0aea90ad2dc686988", null ],
+    [ "GetDistancesTo", "class_x_s_m___c_l_o_s_e_s_t.html#a99d4959fa66c5ff443df2b3738321d05", null ],
+    [ "GetFuelDataBank", "class_x_s_m___c_l_o_s_e_s_t.html#a3fec0afde08a8ab8cf21faefa9c4f070", null ],
+    [ "GetFuelParameter", "class_x_s_m___c_l_o_s_e_s_t.html#abf2f64eda09e9c4e160abe564efd7ea9", null ],
+    [ "GetFuelType", "class_x_s_m___c_l_o_s_e_s_t.html#a6a93b2e96c991ba2a632fae1bac6a424", null ],
+    [ "IsDefine", "class_x_s_m___c_l_o_s_e_s_t.html#a7ff9a6044a054b8339b7760953ec0d83", null ],
+    [ "ReadDataBase", "class_x_s_m___c_l_o_s_e_s_t.html#a4c3c57fadc8739590bb36f0a96df0c4f", null ],
+    [ "SetDataBaseIndex", "class_x_s_m___c_l_o_s_e_s_t.html#afb7a1b007d499e3a9a6a5cacb858ccb3", null ],
+    [ "SetDistanceParameter", "class_x_s_m___c_l_o_s_e_s_t.html#a940fb3441898dad348060e1d95ad8d05", null ],
+    [ "SetDistanceType", "class_x_s_m___c_l_o_s_e_s_t.html#ae805e752e5248d837b2d85007327908b", null ],
+    [ "SetFuelDataBank", "class_x_s_m___c_l_o_s_e_s_t.html#a1e90ca77e61023549b5acc3929318e7c", null ],
+    [ "SetInventoryEvolutionInterpolation", "class_x_s_m___c_l_o_s_e_s_t.html#aebe0253bd9efb317b514fbbe294d5b94", null ],
+    [ "SetOldReadMethod", "class_x_s_m___c_l_o_s_e_s_t.html#a9932efee5f5eeb2cc76ef0744b6c57aa", null ],
+    [ "SetWeightedDistanceCalculation", "class_x_s_m___c_l_o_s_e_s_t.html#a7fbfaabb70475e974d2f617d63f5733f", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/class_x_s_m___m_l_p-members.html b/documentation/doxygen/html/class_x_s_m___m_l_p-members.html
index 3bf3486dbec954df9e3d74c73f05be30a8ffc5f6..7967c21640c3359fda0f35a2e9ef9ceae7d56a3f 100644
--- a/documentation/doxygen/html/class_x_s_m___m_l_p-members.html
+++ b/documentation/doxygen/html/class_x_s_m___m_l_p-members.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
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  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_x_s_m___m_l_p.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">XSM_MLP Member List</div>  </div>
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 </table></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_x_s_m___m_l_p.html b/documentation/doxygen/html/class_x_s_m___m_l_p.html
index 960fe943f34583483a21bf6ded041eab1804b4a9..5d32973efb43a2b8233574b121f54c39053d34ef 100644
--- a/documentation/doxygen/html/class_x_s_m___m_l_p.html
+++ b/documentation/doxygen/html/class_x_s_m___m_l_p.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_x_s_m___m_l_p.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
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@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#pub-methods">Public Member Functions</a> &#124;
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 <li>source/Model/XS/XSM_MLP.cxx</li>
 </ul>
 </div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="class_x_s_m___m_l_p.html">XSM_MLP</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_x_s_m___m_l_p.js b/documentation/doxygen/html/class_x_s_m___m_l_p.js
new file mode 100644
index 0000000000000000000000000000000000000000..a97203b03dfe11777c79fe9057d23f71b4e102d1
--- /dev/null
+++ b/documentation/doxygen/html/class_x_s_m___m_l_p.js
@@ -0,0 +1,11 @@
+var class_x_s_m___m_l_p =
+[
+    [ "XSM_MLP", "class_x_s_m___m_l_p.html#a84cf1c06f3dd863197912bb3421807db", null ],
+    [ "XSM_MLP", "class_x_s_m___m_l_p.html#a19e440eaffb35cb46cdd9b2034dc7973", null ],
+    [ "~XSM_MLP", "class_x_s_m___m_l_p.html#ac2e423cdc58a37a9094c963f390e34f3", null ],
+    [ "GetCrossSections", "class_x_s_m___m_l_p.html#acddefb16c5c7d1cd88190247707b2084", null ],
+    [ "LoadKeyword", "class_x_s_m___m_l_p.html#aaeb63259870e73d33eb6b50d5d4030c3", null ],
+    [ "ReadLine", "class_x_s_m___m_l_p.html#a4db0f698eaf60b95f3b1c572a8c7f95c", null ],
+    [ "ReadTimeSteps", "class_x_s_m___m_l_p.html#a5ca3ccc64c50dce0105fb25713b6a581", null ],
+    [ "ReadZAIName", "class_x_s_m___m_l_p.html#a8a266bef3e3015c6e420ee55e80596ae", null ]
+];
\ No newline at end of file
diff --git a/documentation/doxygen/html/class_x_s_model-members.html b/documentation/doxygen/html/class_x_s_model-members.html
index 34457545e7893d76acb9539e3824f84a484a1222..4b40ac2929975d4eb804e755a8e1e31249f2dba1 100644
--- a/documentation/doxygen/html/class_x_s_model-members.html
+++ b/documentation/doxygen/html/class_x_s_model-members.html
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 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_x_s_model.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
   <div class="headertitle">
 <div class="title">XSModel Member List</div>  </div>
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 </table></div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/class_x_s_model.html b/documentation/doxygen/html/class_x_s_model.html
index ee2e02ee6052660a1ef0111c042ffad2f2806521..eaeb979694c576198c46128160e4eb9ec3a46a67 100644
--- a/documentation/doxygen/html/class_x_s_model.html
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@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
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-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
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    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('class_x_s_model.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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+<script type="text/javascript" src="navtree.js"></script>
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+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
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+      <div id="nav-sync" class="sync"></div>
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+    <a href="http://www.doxygen.org/index.html">
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+/* @license-end */</script>
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+  </div>
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+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('globals_func.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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diff --git a/documentation/doxygen/html/hierarchy.html b/documentation/doxygen/html/hierarchy.html
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+/* @license-end */</script>
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+    </div>
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+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('hierarchy.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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+    <a href="http://www.doxygen.org/index.html">
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diff --git a/documentation/doxygen/html/hierarchy.js b/documentation/doxygen/html/hierarchy.js
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+        [ "CLASSNucleiFiliation", "class_c_l_a_s_s_nuclei_filiation.html", null ],
+        [ "DecayDataBank", "class_decay_data_bank.html", null ],
+        [ "EquivalenceModel", "class_equivalence_model.html", [
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+          [ "EQM_ADS_MLP_RatioPuAM", "class_e_q_m___a_d_s___m_l_p___ratio_pu_a_m.html", null ],
+          [ "EQM_FBR_BakerRoss_MOX", "class_e_q_m___f_b_r___baker_ross___m_o_x.html", null ],
+          [ "EQM_FBR_MLP_Keff", "class_e_q_m___f_b_r___m_l_p___keff.html", null ],
+          [ "EQM_MLP_Kinf", "class_e_q_m___m_l_p___kinf.html", null ],
+          [ "EQM_MLP_PWR_MOxEUS", "class_e_q_m___m_l_p___p_w_r___m_ox_e_u_s.html", null ],
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+          [ "EQM_PWR_MLP_MOX_AM", "class_e_q_m___p_w_r___m_l_p___m_o_x___a_m.html", null ],
+          [ "EQM_PWR_POL_UO2", "class_e_q_m___p_w_r___p_o_l___u_o2.html", null ]
+        ] ],
+        [ "EvolutionData", "class_evolution_data.html", null ],
+        [ "IrradiationModel", "class_irradiation_model.html", [
+          [ "IM_Matrix", "class_i_m___matrix.html", null ],
+          [ "IM_RK4", "class_i_m___r_k4.html", null ]
+        ] ],
+        [ "PhysicsModels", "class_physics_models.html", null ],
+        [ "ReactorModel", "class_reactor_model.html", null ],
+        [ "ReactorScheduler", "class_reactor_scheduler.html", null ],
+        [ "Scenario", "class_scenario.html", null ],
+        [ "ScheduleEntry", "class_schedule_entry.html", null ],
+        [ "XSModel", "class_x_s_model.html", [
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+          [ "XSM_MLP", "class_x_s_m___m_l_p.html", null ]
+        ] ]
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+    [ "TObject", null, [
+      [ "IsotopicVector", "class_isotopic_vector.html", null ],
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+    ] ],
+    [ "ZAIHeat", "class_z_a_i_heat.html", null ],
+    [ "ZAIMass", "class_z_a_i_mass.html", null ],
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+];
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+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
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+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
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+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('index.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
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+}
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+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
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+ @licend  The above is the entire license notice
+ for the JavaScript code in this file
+ */
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+function hashUrl()
+{
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+}
+
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+{
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+function localStorageSupported()
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+}
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+}
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+}
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+var animationInProgress = false;
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+      ancParent.hasClass('fieldname') ||
+      ancParent.hasClass('fieldtype') ||
+      ancParent.is(':header'))
+  {
+    pos = ancParent.position().top;
+  } else if (anchor.position()) {
+    pos = anchor.position().top;
+  }
+  if (pos) {
+    var dist = Math.abs(Math.min(
+               pos-docContent.offset().top,
+               docContent[0].scrollHeight-
+               docContent.height()-docContent.scrollTop()));
+    animationInProgress=true;
+    docContent.animate({
+      scrollTop: pos + docContent.scrollTop() - docContent.offset().top
+    },Math.max(50,Math.min(500,dist)),function(){
+      if (updateLocation) window.location.href=aname;
+      animationInProgress=false;
+    });
+  }
+}
+
+function newNode(o, po, text, link, childrenData, lastNode)
+{
+  var node = new Object();
+  node.children = Array();
+  node.childrenData = childrenData;
+  node.depth = po.depth + 1;
+  node.relpath = po.relpath;
+  node.isLast = lastNode;
+
+  node.li = document.createElement("li");
+  po.getChildrenUL().appendChild(node.li);
+  node.parentNode = po;
+
+  node.itemDiv = document.createElement("div");
+  node.itemDiv.className = "item";
+
+  node.labelSpan = document.createElement("span");
+  node.labelSpan.className = "label";
+
+  createIndent(o,node.itemDiv,node,0);
+  node.itemDiv.appendChild(node.labelSpan);
+  node.li.appendChild(node.itemDiv);
+
+  var a = document.createElement("a");
+  node.labelSpan.appendChild(a);
+  node.label = document.createTextNode(text);
+  node.expanded = false;
+  a.appendChild(node.label);
+  if (link) {
+    var url;
+    if (link.substring(0,1)=='^') {
+      url = link.substring(1);
+      link = url;
+    } else {
+      url = node.relpath+link;
+    }
+    a.className = stripPath(link.replace('#',':'));
+    if (link.indexOf('#')!=-1) {
+      var aname = '#'+link.split('#')[1];
+      var srcPage = stripPath(pathName());
+      var targetPage = stripPath(link.split('#')[0]);
+      a.href = srcPage!=targetPage ? url : "javascript:void(0)";
+      a.onclick = function(){
+        storeLink(link);
+        if (!$(a).parent().parent().hasClass('selected'))
+        {
+          $('.item').removeClass('selected');
+          $('.item').removeAttr('id');
+          $(a).parent().parent().addClass('selected');
+          $(a).parent().parent().attr('id','selected');
+        }
+        var anchor = $(aname);
+        gotoAnchor(anchor,aname,true);
+      };
+    } else {
+      a.href = url;
+      a.onclick = function() { storeLink(link); }
+    }
+  } else {
+    if (childrenData != null)
+    {
+      a.className = "nolink";
+      a.href = "javascript:void(0)";
+      a.onclick = node.expandToggle.onclick;
+    }
+  }
+
+  node.childrenUL = null;
+  node.getChildrenUL = function() {
+    if (!node.childrenUL) {
+      node.childrenUL = document.createElement("ul");
+      node.childrenUL.className = "children_ul";
+      node.childrenUL.style.display = "none";
+      node.li.appendChild(node.childrenUL);
+    }
+    return node.childrenUL;
+  };
+
+  return node;
+}
+
+function showRoot()
+{
+  var headerHeight = $("#top").height();
+  var footerHeight = $("#nav-path").height();
+  var windowHeight = $(window).height() - headerHeight - footerHeight;
+  (function (){ // retry until we can scroll to the selected item
+    try {
+      var navtree=$('#nav-tree');
+      navtree.scrollTo('#selected',0,{offset:-windowHeight/2});
+    } catch (err) {
+      setTimeout(arguments.callee, 0);
+    }
+  })();
+}
+
+function expandNode(o, node, imm, showRoot)
+{
+  if (node.childrenData && !node.expanded) {
+    if (typeof(node.childrenData)==='string') {
+      var varName    = node.childrenData;
+      getScript(node.relpath+varName,function(){
+        node.childrenData = getData(varName);
+        expandNode(o, node, imm, showRoot);
+      }, showRoot);
+    } else {
+      if (!node.childrenVisited) {
+        getNode(o, node);
+      } if (imm || ($.browser.msie && $.browser.version>8)) {
+        // somehow slideDown jumps to the start of tree for IE9 :-(
+        $(node.getChildrenUL()).show();
+      } else {
+        $(node.getChildrenUL()).slideDown("fast");
+      }
+      node.plus_img.innerHTML = arrowDown;
+      node.expanded = true;
+    }
+  }
+}
+
+function glowEffect(n,duration)
+{
+  n.addClass('glow').delay(duration).queue(function(next){
+    $(this).removeClass('glow');next();
+  });
+}
+
+function highlightAnchor()
+{
+  var aname = hashUrl();
+  var anchor = $(aname);
+  if (anchor.parent().attr('class')=='memItemLeft'){
+    var rows = $('.memberdecls tr[class$="'+hashValue()+'"]');
+    glowEffect(rows.children(),300); // member without details
+  } else if (anchor.parent().attr('class')=='fieldname'){
+    glowEffect(anchor.parent().parent(),1000); // enum value
+  } else if (anchor.parent().attr('class')=='fieldtype'){
+    glowEffect(anchor.parent().parent(),1000); // struct field
+  } else if (anchor.parent().is(":header")) {
+    glowEffect(anchor.parent(),1000); // section header
+  } else {
+    glowEffect(anchor.next(),1000); // normal member
+  }
+  gotoAnchor(anchor,aname,false);
+}
+
+function selectAndHighlight(hash,n)
+{
+  var a;
+  if (hash) {
+    var link=stripPath(pathName())+':'+hash.substring(1);
+    a=$('.item a[class$="'+link+'"]');
+  }
+  if (a && a.length) {
+    a.parent().parent().addClass('selected');
+    a.parent().parent().attr('id','selected');
+    highlightAnchor();
+  } else if (n) {
+    $(n.itemDiv).addClass('selected');
+    $(n.itemDiv).attr('id','selected');
+  }
+  if ($('#nav-tree-contents .item:first').hasClass('selected')) {
+    $('#nav-sync').css('top','30px');
+  } else {
+    $('#nav-sync').css('top','5px');
+  }
+  showRoot();
+}
+
+function showNode(o, node, index, hash)
+{
+  if (node && node.childrenData) {
+    if (typeof(node.childrenData)==='string') {
+      var varName    = node.childrenData;
+      getScript(node.relpath+varName,function(){
+        node.childrenData = getData(varName);
+        showNode(o,node,index,hash);
+      },true);
+    } else {
+      if (!node.childrenVisited) {
+        getNode(o, node);
+      }
+      $(node.getChildrenUL()).css({'display':'block'});
+      node.plus_img.innerHTML = arrowDown;
+      node.expanded = true;
+      var n = node.children[o.breadcrumbs[index]];
+      if (index+1<o.breadcrumbs.length) {
+        showNode(o,n,index+1,hash);
+      } else {
+        if (typeof(n.childrenData)==='string') {
+          var varName = n.childrenData;
+          getScript(n.relpath+varName,function(){
+            n.childrenData = getData(varName);
+            node.expanded=false;
+            showNode(o,node,index,hash); // retry with child node expanded
+          },true);
+        } else {
+          var rootBase = stripPath(o.toroot.replace(/\..+$/, ''));
+          if (rootBase=="index" || rootBase=="pages" || rootBase=="search") {
+            expandNode(o, n, true, true);
+          }
+          selectAndHighlight(hash,n);
+        }
+      }
+    }
+  } else {
+    selectAndHighlight(hash);
+  }
+}
+
+function removeToInsertLater(element) {
+  var parentNode = element.parentNode;
+  var nextSibling = element.nextSibling;
+  parentNode.removeChild(element);
+  return function() {
+    if (nextSibling) {
+      parentNode.insertBefore(element, nextSibling);
+    } else {
+      parentNode.appendChild(element);
+    }
+  };
+}
+
+function getNode(o, po)
+{
+  var insertFunction = removeToInsertLater(po.li);
+  po.childrenVisited = true;
+  var l = po.childrenData.length-1;
+  for (var i in po.childrenData) {
+    var nodeData = po.childrenData[i];
+    po.children[i] = newNode(o, po, nodeData[0], nodeData[1], nodeData[2],
+      i==l);
+  }
+  insertFunction();
+}
+
+function gotoNode(o,subIndex,root,hash,relpath)
+{
+  var nti = navTreeSubIndices[subIndex][root+hash];
+  o.breadcrumbs = $.extend(true, [], nti ? nti : navTreeSubIndices[subIndex][root]);
+  if (!o.breadcrumbs && root!=NAVTREE[0][1]) { // fallback: show index
+    navTo(o,NAVTREE[0][1],"",relpath);
+    $('.item').removeClass('selected');
+    $('.item').removeAttr('id');
+  }
+  if (o.breadcrumbs) {
+    o.breadcrumbs.unshift(0); // add 0 for root node
+    showNode(o, o.node, 0, hash);
+  }
+}
+
+function navTo(o,root,hash,relpath)
+{
+  var link = cachedLink();
+  if (link) {
+    var parts = link.split('#');
+    root = parts[0];
+    if (parts.length>1) hash = '#'+parts[1].replace(/[^\w\-]/g,'');
+    else hash='';
+  }
+  if (hash.match(/^#l\d+$/)) {
+    var anchor=$('a[name='+hash.substring(1)+']');
+    glowEffect(anchor.parent(),1000); // line number
+    hash=''; // strip line number anchors
+  }
+  var url=root+hash;
+  var i=-1;
+  while (NAVTREEINDEX[i+1]<=url) i++;
+  if (i==-1) { i=0; root=NAVTREE[0][1]; } // fallback: show index
+  if (navTreeSubIndices[i]) {
+    gotoNode(o,i,root,hash,relpath)
+  } else {
+    getScript(relpath+'navtreeindex'+i,function(){
+      navTreeSubIndices[i] = eval('NAVTREEINDEX'+i);
+      if (navTreeSubIndices[i]) {
+        gotoNode(o,i,root,hash,relpath);
+      }
+    },true);
+  }
+}
+
+function showSyncOff(n,relpath)
+{
+    n.html('<img src="'+relpath+'sync_off.png" title="'+SYNCOFFMSG+'"/>');
+}
+
+function showSyncOn(n,relpath)
+{
+    n.html('<img src="'+relpath+'sync_on.png" title="'+SYNCONMSG+'"/>');
+}
+
+function toggleSyncButton(relpath)
+{
+  var navSync = $('#nav-sync');
+  if (navSync.hasClass('sync')) {
+    navSync.removeClass('sync');
+    showSyncOff(navSync,relpath);
+    storeLink(stripPath2(pathName())+hashUrl());
+  } else {
+    navSync.addClass('sync');
+    showSyncOn(navSync,relpath);
+    deleteLink();
+  }
+}
+
+function initNavTree(toroot,relpath)
+{
+  var o = new Object();
+  o.toroot = toroot;
+  o.node = new Object();
+  o.node.li = document.getElementById("nav-tree-contents");
+  o.node.childrenData = NAVTREE;
+  o.node.children = new Array();
+  o.node.childrenUL = document.createElement("ul");
+  o.node.getChildrenUL = function() { return o.node.childrenUL; };
+  o.node.li.appendChild(o.node.childrenUL);
+  o.node.depth = 0;
+  o.node.relpath = relpath;
+  o.node.expanded = false;
+  o.node.isLast = true;
+  o.node.plus_img = document.createElement("span");
+  o.node.plus_img.className = 'arrow';
+  o.node.plus_img.innerHTML = arrowRight;
+
+  if (localStorageSupported()) {
+    var navSync = $('#nav-sync');
+    if (cachedLink()) {
+      showSyncOff(navSync,relpath);
+      navSync.removeClass('sync');
+    } else {
+      showSyncOn(navSync,relpath);
+    }
+    navSync.click(function(){ toggleSyncButton(relpath); });
+  }
+
+  $(window).load(function(){
+    navTo(o,toroot,hashUrl(),relpath);
+    showRoot();
+  });
+
+  $(window).bind('hashchange', function(){
+     if (window.location.hash && window.location.hash.length>1){
+       var a;
+       if ($(location).attr('hash')){
+         var clslink=stripPath(pathName())+':'+hashValue();
+         a=$('.item a[class$="'+clslink.replace(/</g,'\\3c ')+'"]');
+       }
+       if (a==null || !$(a).parent().parent().hasClass('selected')){
+         $('.item').removeClass('selected');
+         $('.item').removeAttr('id');
+       }
+       var link=stripPath2(pathName());
+       navTo(o,link,hashUrl(),relpath);
+     } else if (!animationInProgress) {
+       $('#doc-content').scrollTop(0);
+       $('.item').removeClass('selected');
+       $('.item').removeAttr('id');
+       navTo(o,toroot,hashUrl(),relpath);
+     }
+  })
+}
+/* @license-end */
diff --git a/documentation/doxygen/html/navtreedata.js b/documentation/doxygen/html/navtreedata.js
new file mode 100644
index 0000000000000000000000000000000000000000..adeff7c66d4128bba610a166f6dc663b73a712f4
--- /dev/null
+++ b/documentation/doxygen/html/navtreedata.js
@@ -0,0 +1,59 @@
+/*
+@ @licstart  The following is the entire license notice for the
+JavaScript code in this file.
+
+Copyright (C) 1997-2017 by Dimitri van Heesch
+
+This program is free software; you can redistribute it and/or modify
+it under the terms of the GNU General Public License as published by
+the Free Software Foundation; either version 2 of the License, or
+(at your option) any later version.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+
+You should have received a copy of the GNU General Public License along
+with this program; if not, write to the Free Software Foundation, Inc.,
+51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+@licend  The above is the entire license notice
+for the JavaScript code in this file
+*/
+var NAVTREE =
+[
+  [ "CLASS", "index.html", [
+    [ "Deprecated List", "deprecated.html", null ],
+    [ "Classes", "annotated.html", [
+      [ "Class List", "annotated.html", "annotated_dup" ],
+      [ "Class Index", "classes.html", null ],
+      [ "Class Hierarchy", "hierarchy.html", "hierarchy" ],
+      [ "Class Members", "functions.html", [
+        [ "All", "functions.html", "functions_dup" ],
+        [ "Functions", "functions_func.html", "functions_func" ],
+        [ "Variables", "functions_vars.html", null ]
+      ] ]
+    ] ],
+    [ "Files", "files.html", [
+      [ "File List", "files.html", "files_dup" ],
+      [ "File Members", "globals.html", [
+        [ "All", "globals.html", null ],
+        [ "Functions", "globals_func.html", null ],
+        [ "Enumerations", "globals_enum.html", null ]
+      ] ]
+    ] ]
+  ] ]
+];
+
+var NAVTREEINDEX =
+[
+"_c_l_a_s_s_back_end_8hxx.html",
+"class_decay_data_bank.html#a7538248021f1073f49f6c97d4d78286a",
+"class_evolution_data.html#a887d3aeab6043590880a84a2273434dc",
+"class_pool.html#a6f769fb6e2b5f1de14e73a42077d3b45",
+"class_x_s_model.html#a1872fba7910ae3affa4c25e572c51043"
+];
+
+var SYNCONMSG = 'click to disable panel synchronisation';
+var SYNCOFFMSG = 'click to enable panel synchronisation';
\ No newline at end of file
diff --git a/documentation/doxygen/html/navtreeindex0.js b/documentation/doxygen/html/navtreeindex0.js
new file mode 100644
index 0000000000000000000000000000000000000000..29f15b9aa6e5c4d82f9dbb3452a0d595ba1d1f84
--- /dev/null
+++ b/documentation/doxygen/html/navtreeindex0.js
@@ -0,0 +1,253 @@
+var NAVTREEINDEX0 =
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+ (at your option) any later version.
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+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
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+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
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diff --git a/documentation/doxygen/html/structmy__tolower.html b/documentation/doxygen/html/structmy__tolower.html
index 989ec7d0a8225d7839ab8d6e8f30598908ca7066..32b424fe9d513c507d9b8846ee311efd6282df7c 100644
--- a/documentation/doxygen/html/structmy__tolower.html
+++ b/documentation/doxygen/html/structmy__tolower.html
@@ -9,6 +9,14 @@
 <link href="tabs.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="jquery.js"></script>
 <script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(initResizable);
+/* @license-end */</script>
 <link href="search/search.css" rel="stylesheet" type="text/css"/>
 <script type="text/javascript" src="search/searchdata.js"></script>
 <script type="text/javascript" src="search/search.js"></script>
@@ -20,7 +28,6 @@
 <table cellspacing="0" cellpadding="0">
  <tbody>
  <tr style="height: 56px;">
-  <td id="projectlogo"><img alt="Logo" src="CLASSLogo.png"/></td>
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">CLASS
    &#160;<span id="projectnumber">5.1</span>
@@ -48,6 +55,23 @@ $(function() {
 });
 /* @license-end */</script>
 <div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('structmy__tolower.html','');});
+/* @license-end */
+</script>
+<div id="doc-content">
 <!-- window showing the filter options -->
 <div id="MSearchSelectWindow"
      onmouseover="return searchBox.OnSearchSelectShow()"
@@ -62,7 +86,6 @@ $(function() {
 </iframe>
 </div>
 
-</div><!-- top -->
 <div class="header">
   <div class="summary">
 <a href="#pub-methods">Public Member Functions</a> &#124;
@@ -82,11 +105,15 @@ char&#160;</td><td class="memItemRight" valign="bottom"><b>operator()</b> (char
 <li>source/include/<a class="el" href="_c_l_a_s_s_method_8hxx_source.html">CLASSMethod.hxx</a></li>
 </ul>
 </div><!-- contents -->
+</div><!-- doc-content -->
 <!-- start footer part -->
-<hr class="footer"/><address class="footer"><small>
-Generated by &#160;<a href="http://www.doxygen.org/index.html">
-<img class="footer" src="doxygen.png" alt="doxygen"/>
-</a> 1.8.14
-</small></address>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="structmy__tolower.html">my_tolower</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.14 </li>
+  </ul>
+</div>
 </body>
 </html>
diff --git a/documentation/doxygen/html/structmy__tolower.js b/documentation/doxygen/html/structmy__tolower.js
new file mode 100644
index 0000000000000000000000000000000000000000..0d39d5690f20033032846f9353b3357032407c09
--- /dev/null
+++ b/documentation/doxygen/html/structmy__tolower.js
@@ -0,0 +1,4 @@
+var structmy__tolower =
+[
+    [ "operator()", "structmy__tolower.html#a57b018549b0680c4510c3014519d26f3", null ]
+];
\ No newline at end of file