diff --git a/examples/notebooks/Harvest_zenodo.ipynb b/examples/notebooks/Harvest_zenodo.ipynb
index ad36b200fe3b78e593d4691d74d722dda3c96026..344c7508ac59527c4cf3e3515bcb9c6ef91ae4df 100644
--- a/examples/notebooks/Harvest_zenodo.ipynb
+++ b/examples/notebooks/Harvest_zenodo.ipynb
@@ -150,7 +150,7 @@
},
{
"cell_type": "code",
- "execution_count": 1,
+ "execution_count": null,
"id": "26424a79",
"metadata": {},
"outputs": [],
@@ -160,7 +160,7 @@
},
{
"cell_type": "code",
- "execution_count": 2,
+ "execution_count": null,
"id": "e7a84906",
"metadata": {},
"outputs": [],
@@ -178,7 +178,7 @@
},
{
"cell_type": "code",
- "execution_count": 3,
+ "execution_count": null,
"id": "5ee3a192",
"metadata": {},
"outputs": [],
@@ -208,21 +208,10 @@
},
{
"cell_type": "code",
- "execution_count": 5,
+ "execution_count": null,
"id": "fde5ee19",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "dict_keys(['aggregations', 'hits', 'links'])"
- ]
- },
- "execution_count": 5,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"escape2020 = requests.get('https://zenodo.org/api/records', params=parameters).json()\n",
"escape2020.keys()"
@@ -238,71 +227,10 @@
},
{
"cell_type": "code",
- "execution_count": 6,
+ "execution_count": null,
"id": "2506740f",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "{'access_right': {'buckets': [{'doc_count': 15, 'key': 'open'}],\n",
- " 'doc_count_error_upper_bound': 0,\n",
- " 'sum_other_doc_count': 0},\n",
- " 'file_type': {'buckets': [{'doc_count': 7, 'key': 'zip'},\n",
- " {'doc_count': 4, 'key': 'pdf'},\n",
- " {'doc_count': 3, 'key': 'gz'},\n",
- " {'doc_count': 2, 'key': 'json'},\n",
- " {'doc_count': 1, 'key': ''},\n",
- " {'doc_count': 1, 'key': 'md'},\n",
- " {'doc_count': 1, 'key': 'simg'},\n",
- " {'doc_count': 1, 'key': 'tar'}],\n",
- " 'doc_count_error_upper_bound': 0,\n",
- " 'sum_other_doc_count': 0},\n",
- " 'keywords': {'buckets': [{'doc_count': 3, 'key': 'ESCAPE'},\n",
- " {'doc_count': 2, 'key': 'CTA'},\n",
- " {'doc_count': 2, 'key': 'python'},\n",
- " {'doc_count': 1, 'key': 'AGN'},\n",
- " {'doc_count': 1, 'key': 'EOSC'},\n",
- " {'doc_count': 1,\n",
- " 'key': 'European Open Science Cloud, ESFRI, e-Infrastructures'},\n",
- " {'doc_count': 1, 'key': 'Horizon Europe'},\n",
- " {'doc_count': 1, 'key': 'Interoperability'},\n",
- " {'doc_count': 1, 'key': 'MWL'},\n",
- " {'doc_count': 1,\n",
- " 'key': 'Machine Learning, Big Data, Aapche Kafka, Gravitational Wave'}],\n",
- " 'doc_count_error_upper_bound': 0,\n",
- " 'sum_other_doc_count': 17},\n",
- " 'type': {'buckets': [{'doc_count': 10,\n",
- " 'key': 'software',\n",
- " 'subtype': {'buckets': [],\n",
- " 'doc_count_error_upper_bound': 0,\n",
- " 'sum_other_doc_count': 0}},\n",
- " {'doc_count': 3,\n",
- " 'key': 'publication',\n",
- " 'subtype': {'buckets': [{'doc_count': 1, 'key': 'other'},\n",
- " {'doc_count': 1, 'key': 'report'},\n",
- " {'doc_count': 1, 'key': 'workingpaper'}],\n",
- " 'doc_count_error_upper_bound': 0,\n",
- " 'sum_other_doc_count': 0}},\n",
- " {'doc_count': 1,\n",
- " 'key': 'lesson',\n",
- " 'subtype': {'buckets': [],\n",
- " 'doc_count_error_upper_bound': 0,\n",
- " 'sum_other_doc_count': 0}},\n",
- " {'doc_count': 1,\n",
- " 'key': 'poster',\n",
- " 'subtype': {'buckets': [],\n",
- " 'doc_count_error_upper_bound': 0,\n",
- " 'sum_other_doc_count': 0}}],\n",
- " 'doc_count_error_upper_bound': 0,\n",
- " 'sum_other_doc_count': 0}}"
- ]
- },
- "execution_count": 6,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"# Nice summary of the request we just made\n",
"escape2020['aggregations']"
@@ -310,19 +238,10 @@
},
{
"cell_type": "code",
- "execution_count": 7,
+ "execution_count": null,
"id": "dd36b4be",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "dict_keys(['hits', 'total'])\n",
- "15\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"# Total number of entries in the payload\n",
"print(escape2020['hits'].keys())\n",
@@ -331,7 +250,7 @@
},
{
"cell_type": "code",
- "execution_count": 8,
+ "execution_count": null,
"id": "0550cffb",
"metadata": {},
"outputs": [],
@@ -341,121 +260,10 @@
},
{
"cell_type": "code",
- "execution_count": 9,
+ "execution_count": null,
"id": "94a4e8c9",
- "metadata": {
- "scrolled": false
- },
- "outputs": [
- {
- "data": {
- "text/plain": [
- "{'conceptdoi': '10.5281/zenodo.5176088',\n",
- " 'conceptrecid': '5176088',\n",
- " 'created': '2021-08-16T07:21:15.005975+00:00',\n",
- " 'doi': '10.5281/zenodo.5176089',\n",
- " 'files': [{'bucket': '409f3f8e-cb73-4a10-b718-3b8fc238a616',\n",
- " 'checksum': 'md5:eab8fbaa4c318cbd75629eb6a7719ecb',\n",
- " 'key': 'EOSC_SYMPOSIUM_2021_Report.pdf',\n",
- " 'links': {'self': 'https://zenodo.org/api/files/409f3f8e-cb73-4a10-b718-3b8fc238a616/EOSC_SYMPOSIUM_2021_Report.pdf'},\n",
- " 'size': 1654918,\n",
- " 'type': 'pdf'}],\n",
- " 'id': 5176089,\n",
- " 'links': {'badge': 'https://zenodo.org/badge/doi/10.5281/zenodo.5176089.svg',\n",
- " 'bucket': 'https://zenodo.org/api/files/409f3f8e-cb73-4a10-b718-3b8fc238a616',\n",
- " 'conceptbadge': 'https://zenodo.org/badge/doi/10.5281/zenodo.5176088.svg',\n",
- " 'conceptdoi': 'https://doi.org/10.5281/zenodo.5176088',\n",
- " 'doi': 'https://doi.org/10.5281/zenodo.5176089',\n",
- " 'html': 'https://zenodo.org/record/5176089',\n",
- " 'latest': 'https://zenodo.org/api/records/5176089',\n",
- " 'latest_html': 'https://zenodo.org/record/5176089',\n",
- " 'self': 'https://zenodo.org/api/records/5176089'},\n",
- " 'metadata': {'access_right': 'open',\n",
- " 'access_right_category': 'success',\n",
- " 'communities': [{'id': 'envri'},\n",
- " {'id': 'eosc_synergy'},\n",
- " {'id': 'eoscsecretariat'},\n",
- " {'id': 'escape2020'},\n",
- " {'id': 'expands'},\n",
- " {'id': 'ni4os-europe'},\n",
- " {'id': 'sshoc'}],\n",
- " 'contributors': [{'affiliation': 'Trust-IT Services',\n",
- " 'name': 'Ferguson, Nicholas',\n",
- " 'orcid': '0000-0001-5523-6430',\n",
- " 'type': 'WorkPackageLeader'}],\n",
- " 'creators': [{'affiliation': 'Technopolis Group Belgium',\n",
- " 'name': 'Bertacchini, Veronica'},\n",
- " {'affiliation': 'Trust-IT Services',\n",
- " 'name': 'Drago, Federico',\n",
- " 'orcid': '0000-0002-1333-4478'},\n",
- " {'affiliation': 'TU Wien',\n",
- " 'name': 'Flicker, Katharina',\n",
- " 'orcid': '0000-0001-6040-2798'},\n",
- " {'affiliation': 'KIT', 'name': 'Gebreyesus, Netsanet'},\n",
- " {'affiliation': 'GÉANT', 'name': 'Grant, Annabel'},\n",
- " {'affiliation': 'CERN',\n",
- " 'name': 'Jones, Bob',\n",
- " 'orcid': '0000-0001-9092-4589'},\n",
- " {'affiliation': 'CSC-IT Center for Science', 'name': 'Liinamaa, Iiris'},\n",
- " {'affiliation': 'CSC-IT Center for Science', 'name': 'Märkälä, Anu'},\n",
- " {'affiliation': 'Athena Research Center',\n",
- " 'name': 'Marinos-Kouris, Christos'},\n",
- " {'affiliation': 'GO FAIR Foundation',\n",
- " 'name': 'Meerman, Bert',\n",
- " 'orcid': '0000-0002-0071-2660'},\n",
- " {'affiliation': 'TU Wien',\n",
- " 'name': 'Saurugger, Bernd',\n",
- " 'orcid': '0000-0001-5730-3983'},\n",
- " {'affiliation': 'Trust-IT Services',\n",
- " 'name': 'Smith, Zachary',\n",
- " 'orcid': '0000-0002-9984-008X'}],\n",
- " 'description': '<p>The EOSC Symposium 2021 provided a key engagement opportunity for the EOSC community after the European Open Science Cloud finally entered its highly-anticipated implementation phase in 2021. Delivered online to just under 1,000 EOSC stakeholders from over 63 different countries, this was not only the largest EOSC Symposium yet, but it was also an essential opportunity for convergence and alignment on principles and priorities.</p>\\n\\n<p>The EOSC Association will play an important role in this phase. With already over 210 member and observer organisations from across Europe, the Association represents a single voice for the advocacy and representation of the broader EOSC Stakeholder community in Europe, promoting alignment of EU research policy and priorities.</p>\\n\\n<p>The Association will continuously develop the EOSC Strategic Research and Innovation Agenda (SRIA) which will influence future EOSC activities at institutional, national and EU level (including the EOSC-related work programmes in Horizon Europe). This living document will adapt to the changing EOSC ecosystem and the needs of EOSC stakeholders. The Association is setting up a series of Advisory Groups (AG) with Task Forces (TF) to engage with the EOSC community around priority areas, namely:</p>\\n\\n<ul>\\n\\t<li>Implementation of EOSC</li>\\n\\t<li>Metadata and Data Quality</li>\\n\\t<li>Research Careers and Curricula</li>\\n\\t<li>Sustaining EOSC</li>\\n\\t<li>Technical Challenges on EOSC</li>\\n</ul>\\n\\n<p>The Symposium was the first opportunity for the Association to present the draft charters of the Task Forces. A key objective of the event was also for the Association to understand what work has been carried out, is in progress, or is planned on the topics of the AGs and TFs. A call for contributions ran throughout May 2021, with a total of 137 applications received. Through presentations, lightning talks, and panels, over 70 community members were able to highlight key findings and recommendations for the AGs and TFs to take into consideration for their work.</p>',\n",
- " 'doi': '10.5281/zenodo.5176089',\n",
- " 'grants': [{'acronym': 'EOSCsecretariat.eu',\n",
- " 'code': '831644',\n",
- " 'funder': {'acronyms': [],\n",
- " 'doi': '10.13039/501100000780',\n",
- " 'links': {'self': 'https://zenodo.org/api/funders/10.13039/501100000780'},\n",
- " 'name': 'European Commission'},\n",
- " 'links': {'self': 'https://zenodo.org/api/grants/10.13039/501100000780::831644'},\n",
- " 'program': 'H2020',\n",
- " 'title': 'EOSCsecretariat.eu'}],\n",
- " 'keywords': ['EOSC', 'Open Science', 'Horizon Europe', 'Interoperability'],\n",
- " 'language': 'eng',\n",
- " 'license': {'id': 'CC-BY-4.0'},\n",
- " 'publication_date': '2021-08-10',\n",
- " 'related_identifiers': [{'identifier': '10.5281/zenodo.5176088',\n",
- " 'relation': 'isVersionOf',\n",
- " 'scheme': 'doi'}],\n",
- " 'relations': {'version': [{'count': 1,\n",
- " 'index': 0,\n",
- " 'is_last': True,\n",
- " 'last_child': {'pid_type': 'recid', 'pid_value': '5176089'},\n",
- " 'parent': {'pid_type': 'recid', 'pid_value': '5176088'}}]},\n",
- " 'resource_type': {'subtype': 'report',\n",
- " 'title': 'Report',\n",
- " 'type': 'publication'},\n",
- " 'title': 'EOSC Symposium 2021 Report'},\n",
- " 'owners': [91736],\n",
- " 'revision': 8,\n",
- " 'stats': {'downloads': 479.0,\n",
- " 'unique_downloads': 411.0,\n",
- " 'unique_views': 514.0,\n",
- " 'version_downloads': 479.0,\n",
- " 'version_unique_downloads': 411.0,\n",
- " 'version_unique_views': 514.0,\n",
- " 'version_views': 537.0,\n",
- " 'version_volume': 792705722.0,\n",
- " 'views': 537.0,\n",
- " 'volume': 792705722.0},\n",
- " 'updated': '2021-08-24T14:27:14.603504+00:00'}"
- ]
- },
- "execution_count": 9,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "metadata": {},
+ "outputs": [],
"source": [
"# The content of the first entry of the payload - It contain all the info that we can also find in Zenodo\n",
"all_entries[0]"
@@ -463,32 +271,10 @@
},
{
"cell_type": "code",
- "execution_count": 10,
+ "execution_count": null,
"id": "0b48bcff",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "5176089 \t EOSC Symposium 2021 Report\n",
- "5153369 \t agnpy: Modelling Active Galactic Nuclei radiative processes with python.\n",
- "5093909 \t ESCAPE Data Science Summer School 2021\n",
- "4923992 \t ESCAPE template project\n",
- "4786641 \t ZenodoCI\n",
- "4601451 \t gLike: numerical maximization of heterogeneous joint likelihood functions of a common free parameter plus nuisance parameters\n",
- "4419866 \t IndexedConv/IndexedConv: v1.3\n",
- "4044010 \t EOSC - a tool for enabling Open Science in Europe\n",
- "3854976 \t FairRootGroup/DDS\n",
- "3743489 \t ESCAPE the maze\n",
- "3675081 \t ESFRI cluster projects - Position papers on expectations and planned contributions to the EOSC\n",
- "3659184 \t ctapipe_io_mchdf5\n",
- "3614662 \t FairRoot\n",
- "3362435 \t FairMQ\n",
- "3356656 \t A prototype for a real time pipeline for the detection of transient signals and their automatic classification\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"# Example to retrieve entries_ids and titles\n",
"for entry in all_entries:\n",
@@ -497,28 +283,10 @@
},
{
"cell_type": "code",
- "execution_count": 11,
+ "execution_count": null,
"id": "e2afd195",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "5176089 \t ['EOSC', 'Open Science', 'Horizon Europe', 'Interoperability']\n",
- "5153369 \t ['radiative processes', 'blazars', 'radio galaxies', 'AGN', 'jets', 'MWL', 'astropy', 'numpy', 'python']\n",
- "5093909 \t ['python', 'lesson']\n",
- "4923992 \t ['ESCAPE', 'jupyter-notebook']\n",
- "4786641 \t ['ESCAPE']\n",
- "4419866 \t ['CTA']\n",
- "4044010 \t ['European Open Science Cloud, ESFRI, e-Infrastructures']\n",
- "3743489 \t ['ESCAPE']\n",
- "3659184 \t ['CTA']\n",
- "3614662 \t ['geant4', 'c-plus-plus', 'cmake', 'reconstruction', 'vmc', 'modular', 'analysis', 'simulation']\n",
- "3356656 \t ['Machine Learning, Big Data, Aapche Kafka, Gravitational Wave']\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"# Example of all the keywords within each entry\n",
"for entry in all_entries:\n",
@@ -538,21 +306,10 @@
},
{
"cell_type": "code",
- "execution_count": 12,
+ "execution_count": null,
"id": "75b4de93",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "dict_keys(['conceptdoi', 'conceptrecid', 'created', 'doi', 'files', 'id', 'links', 'metadata', 'owners', 'revision', 'stats', 'updated'])"
- ]
- },
- "execution_count": 12,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"agnpy = requests.get('https://zenodo.org/api/records/4687123', params=parameters).json()\n",
"agnpy.keys()"
@@ -560,65 +317,20 @@
},
{
"cell_type": "code",
- "execution_count": 13,
+ "execution_count": null,
"id": "39be15f1",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "{'access_right': 'open',\n",
- " 'access_right_category': 'success',\n",
- " 'communities': [{'id': 'escape2020'}],\n",
- " 'creators': [{'affiliation': \"Institut de FÃsica d'Altes Energies (IFAE)\",\n",
- " 'name': 'Cosimo Nigro'},\n",
- " {'name': 'Julian Sitarek'},\n",
- " {'affiliation': 'Minnesota State University Moorhead', 'name': 'Matt Craig'},\n",
- " {'name': 'Paweł Gliwny'},\n",
- " {'affiliation': '@sourcery-ai', 'name': 'Sourcery AI'}],\n",
- " 'description': '<p>In this release the major features added are:</p>\\n<ul>\\n<li><p>an exponential cutoff power-law for the electron spectra;</p>\\n</li>\\n<li><p>the possibility to compute the gamma-gamma opacity for misaligned sources (<code>viewing angle != 0</code>) for the following targets: point source behind the jet, BLR and the DT.</p>\\n</li>\\n</ul>',\n",
- " 'doi': '10.5281/zenodo.4687123',\n",
- " 'license': {'id': 'other-open'},\n",
- " 'publication_date': '2021-04-14',\n",
- " 'related_identifiers': [{'identifier': 'https://github.com/cosimoNigro/agnpy/tree/v0.0.10',\n",
- " 'relation': 'isSupplementTo',\n",
- " 'scheme': 'url'},\n",
- " {'identifier': '10.5281/zenodo.4055175',\n",
- " 'relation': 'isVersionOf',\n",
- " 'scheme': 'doi'}],\n",
- " 'relations': {'version': [{'count': 7,\n",
- " 'index': 3,\n",
- " 'is_last': False,\n",
- " 'last_child': {'pid_type': 'recid', 'pid_value': '5153369'},\n",
- " 'parent': {'pid_type': 'recid', 'pid_value': '4055175'}}]},\n",
- " 'resource_type': {'title': 'Software', 'type': 'software'},\n",
- " 'title': 'cosimoNigro/agnpy: v0.0.10: added EPWL for electrons and off-axis absorption calculation',\n",
- " 'version': 'v0.0.10'}"
- ]
- },
- "execution_count": 13,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"agnpy['metadata']"
]
},
{
"cell_type": "code",
- "execution_count": 14,
+ "execution_count": null,
"id": "1ee7197f",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "https://zenodo.org/api/files/a806b549-922e-4025-9453-a5f4c0913fdd/cosimoNigro/agnpy-v0.0.10.zip\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"for file in agnpy['files']:\n",
" print(file['links']['self'])"
@@ -636,7 +348,7 @@
},
{
"cell_type": "code",
- "execution_count": 15,
+ "execution_count": null,
"id": "16db6ee0",
"metadata": {},
"outputs": [],
@@ -646,21 +358,10 @@
},
{
"cell_type": "code",
- "execution_count": 16,
+ "execution_count": null,
"id": "9feca5e6",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "https://zenodo.org/api/files/923a2614-a0fa-4927-bb3b-704168f3c768/codemeta.json\n",
- "https://zenodo.org/api/files/923a2614-a0fa-4927-bb3b-704168f3c768/Singularity\n",
- "https://zenodo.org/api/files/923a2614-a0fa-4927-bb3b-704168f3c768/Singularity.simg\n",
- "https://zenodo.org/api/files/923a2614-a0fa-4927-bb3b-704168f3c768/template_project_escape-v2.1.zip\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"for file in ESCAPE_template['files']:\n",
" print(file['links']['self'])"
diff --git a/examples/notebooks/ossr_api-Explore_the_OSSR.ipynb b/examples/notebooks/ossr_api-Explore_the_OSSR.ipynb
index b16e3688935e629337601ce75c016e86c444c372..340d5ee7d910f023151e8ac3ddca200cca456a8e 100644
--- a/examples/notebooks/ossr_api-Explore_the_OSSR.ipynb
+++ b/examples/notebooks/ossr_api-Explore_the_OSSR.ipynb
@@ -23,7 +23,7 @@
},
{
"cell_type": "code",
- "execution_count": 1,
+ "execution_count": null,
"id": "dbde9b19",
"metadata": {},
"outputs": [],
@@ -33,7 +33,7 @@
},
{
"cell_type": "code",
- "execution_count": 2,
+ "execution_count": null,
"id": "2fe017bc",
"metadata": {},
"outputs": [],
@@ -43,21 +43,10 @@
},
{
"cell_type": "code",
- "execution_count": 3,
+ "execution_count": null,
"id": "5eb34293",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "16"
- ]
- },
- "execution_count": 3,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"len(ossr_records)"
]
@@ -72,7 +61,7 @@
},
{
"cell_type": "code",
- "execution_count": 4,
+ "execution_count": null,
"id": "f88ebfd3",
"metadata": {},
"outputs": [],
@@ -82,202 +71,20 @@
},
{
"cell_type": "code",
- "execution_count": 5,
+ "execution_count": null,
"id": "988b95c7",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "Record #5524913 : eossr\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"print(record)"
]
},
{
"cell_type": "code",
- "execution_count": 6,
+ "execution_count": null,
"id": "6bbe7db1",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "{\n",
- " \"conceptdoi\": \"10.5281/zenodo.5524912\",\n",
- " \"conceptrecid\": \"5524912\",\n",
- " \"created\": \"2021-09-23T15:03:51.644210+00:00\",\n",
- " \"doi\": \"10.5281/zenodo.5524913\",\n",
- " \"files\": [\n",
- " {\n",
- " \"bucket\": \"165e5f9a-17bc-4792-bd04-b01cef8b9fc7\",\n",
- " \"checksum\": \"md5:20d7ce7abc06541bed2655f19edfb956\",\n",
- " \"key\": \"codemeta.json\",\n",
- " \"links\": {\n",
- " \"self\": \"https://zenodo.org/api/files/165e5f9a-17bc-4792-bd04-b01cef8b9fc7/codemeta.json\"\n",
- " },\n",
- " \"size\": 3271,\n",
- " \"type\": \"json\"\n",
- " },\n",
- " {\n",
- " \"bucket\": \"165e5f9a-17bc-4792-bd04-b01cef8b9fc7\",\n",
- " \"checksum\": \"md5:33489eacd42433ffdb66da2972b3e900\",\n",
- " \"key\": \"Docker_v0.2.tar\",\n",
- " \"links\": {\n",
- " \"self\": \"https://zenodo.org/api/files/165e5f9a-17bc-4792-bd04-b01cef8b9fc7/Docker_v0.2.tar\"\n",
- " },\n",
- " \"size\": 3085572608,\n",
- " \"type\": \"tar\"\n",
- " },\n",
- " {\n",
- " \"bucket\": \"165e5f9a-17bc-4792-bd04-b01cef8b9fc7\",\n",
- " \"checksum\": \"md5:ef70d30cd1d548e1ba8ebd71679cbbb8\",\n",
- " \"key\": \"eossr-v0.2.zip\",\n",
- " \"links\": {\n",
- " \"self\": \"https://zenodo.org/api/files/165e5f9a-17bc-4792-bd04-b01cef8b9fc7/eossr-v0.2.zip\"\n",
- " },\n",
- " \"size\": 60988,\n",
- " \"type\": \"zip\"\n",
- " }\n",
- " ],\n",
- " \"id\": 5524913,\n",
- " \"links\": {\n",
- " \"badge\": \"https://zenodo.org/badge/doi/10.5281/zenodo.5524913.svg\",\n",
- " \"bucket\": \"https://zenodo.org/api/files/165e5f9a-17bc-4792-bd04-b01cef8b9fc7\",\n",
- " \"conceptbadge\": \"https://zenodo.org/badge/doi/10.5281/zenodo.5524912.svg\",\n",
- " \"conceptdoi\": \"https://doi.org/10.5281/zenodo.5524912\",\n",
- " \"doi\": \"https://doi.org/10.5281/zenodo.5524913\",\n",
- " \"html\": \"https://zenodo.org/record/5524913\",\n",
- " \"latest\": \"https://zenodo.org/api/records/5524913\",\n",
- " \"latest_html\": \"https://zenodo.org/record/5524913\",\n",
- " \"self\": \"https://zenodo.org/api/records/5524913\"\n",
- " },\n",
- " \"metadata\": {\n",
- " \"access_right\": \"open\",\n",
- " \"access_right_category\": \"success\",\n",
- " \"communities\": [\n",
- " {\n",
- " \"id\": \"escape2020\"\n",
- " }\n",
- " ],\n",
- " \"creators\": [\n",
- " {\n",
- " \"affiliation\": \"LAPP, CNRS\",\n",
- " \"name\": \"Vuillaume, Thomas\",\n",
- " \"orcid\": \"0000-0002-5686-2078\"\n",
- " },\n",
- " {\n",
- " \"affiliation\": \"LAPP, CNRS\",\n",
- " \"name\": \"Garcia, Enrique\",\n",
- " \"orcid\": \"0000-0003-2224-4594\"\n",
- " },\n",
- " {\n",
- " \"affiliation\": \"GSI\",\n",
- " \"name\": \"Tacke, Christian\",\n",
- " \"orcid\": \"0000-0002-5321-8404\"\n",
- " },\n",
- " {\n",
- " \"affiliation\": \"ECAP, FAU (Nuremberg, Germany)\",\n",
- " \"name\": \"G\\u00e1l, Tam\\u00e1s\",\n",
- " \"orcid\": \"0000-0001-7821-8673\"\n",
- " }\n",
- " ],\n",
- " \"description\": \"<p>ESCAPE OSSR library</p>\\n\\n<ul>\\n\\t<li>Code: <a href=\\\"https://gitlab.in2p3.fr/escape2020/wp3/eossr\\\">https://gitlab.in2p3.fr/escape2020/wp3/eossr</a></li>\\n\\t<li>Documentation: <a href=\\\"https://escape2020.pages.in2p3.fr/wp3/eossr/\\\">https://escape2020.pages.in2p3.fr/wp3/eossr/</a></li>\\n</ul>\",\n",
- " \"doi\": \"10.5281/zenodo.5524913\",\n",
- " \"grants\": [\n",
- " {\n",
- " \"acronym\": \"ESCAPE\",\n",
- " \"code\": \"824064\",\n",
- " \"funder\": {\n",
- " \"acronyms\": [],\n",
- " \"doi\": \"10.13039/501100000780\",\n",
- " \"links\": {\n",
- " \"self\": \"https://zenodo.org/api/funders/10.13039/501100000780\"\n",
- " },\n",
- " \"name\": \"European Commission\"\n",
- " },\n",
- " \"links\": {\n",
- " \"self\": \"https://zenodo.org/api/grants/10.13039/501100000780::824064\"\n",
- " },\n",
- " \"program\": \"H2020\",\n",
- " \"title\": \"European Science Cluster of Astronomy & Particle physics ESFRI research infrastructures\"\n",
- " }\n",
- " ],\n",
- " \"keywords\": [\n",
- " \"jupyter-notebook\"\n",
- " ],\n",
- " \"language\": \"eng\",\n",
- " \"license\": {\n",
- " \"id\": \"MIT\"\n",
- " },\n",
- " \"notes\": \"Release Notes:\\nThis major release of the eossr introduces 3 pillars that allow the user to interact easily with the ESCAPE OSSR:\\n\\n\\n- **API** module: introduces an API to communicate with the OSSR built on Zenodo's API:\\n - fetch OSSR records\\n - get records metadata\\n - upload a new record\\n - update an existing record\\n\\n\\n- **metadata** module:\\n - implement the official metadata schema for the OSSR based on codemeta schema\\n - method to translate codemeta metadata into zenodo metadata\\n\\n- **continuous integration**: collection of methods and snippets to allow users to use the gitlab CI to: \\n - make a new record in the OSSR\\n - update an existing record in the OSSR\\n - build a Docker container / image\\n - build a Singularity container / image\\n - add containers to the gitlab registry\\n - add images to your OSSR upload\",\n",
- " \"publication_date\": \"2021-09-23\",\n",
- " \"related_identifiers\": [\n",
- " {\n",
- " \"identifier\": \"https://gitlab.in2p3.fr/escape2020/wp3/eossr\",\n",
- " \"relation\": \"isSupplementTo\",\n",
- " \"resource_type\": \"software\",\n",
- " \"scheme\": \"url\"\n",
- " },\n",
- " {\n",
- " \"identifier\": \"10.5281/zenodo.5524912\",\n",
- " \"relation\": \"isVersionOf\",\n",
- " \"scheme\": \"doi\"\n",
- " }\n",
- " ],\n",
- " \"relations\": {\n",
- " \"version\": [\n",
- " {\n",
- " \"count\": 1,\n",
- " \"index\": 0,\n",
- " \"is_last\": true,\n",
- " \"last_child\": {\n",
- " \"pid_type\": \"recid\",\n",
- " \"pid_value\": \"5524913\"\n",
- " },\n",
- " \"parent\": {\n",
- " \"pid_type\": \"recid\",\n",
- " \"pid_value\": \"5524912\"\n",
- " }\n",
- " }\n",
- " ]\n",
- " },\n",
- " \"resource_type\": {\n",
- " \"title\": \"Software\",\n",
- " \"type\": \"software\"\n",
- " },\n",
- " \"title\": \"eossr\",\n",
- " \"version\": \"v0.2\"\n",
- " },\n",
- " \"owners\": [\n",
- " 37616\n",
- " ],\n",
- " \"revision\": 4,\n",
- " \"stats\": {\n",
- " \"downloads\": 13.0,\n",
- " \"unique_downloads\": 7.0,\n",
- " \"unique_views\": 6.0,\n",
- " \"version_downloads\": 13.0,\n",
- " \"version_unique_downloads\": 7.0,\n",
- " \"version_unique_views\": 6.0,\n",
- " \"version_views\": 8.0,\n",
- " \"version_volume\": 3085785011.0,\n",
- " \"views\": 8.0,\n",
- " \"volume\": 3085785011.0\n",
- " },\n",
- " \"updated\": \"2021-09-24T13:48:31.042154+00:00\"\n",
- "}"
- ]
- },
- "execution_count": 6,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"record"
]
@@ -300,30 +107,10 @@
},
{
"cell_type": "code",
- "execution_count": 7,
+ "execution_count": null,
"id": "a9ec3d38",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "=== Record #5524913 ===\n",
- "Title: eossr ===\n",
- "DOI: 10.5281/zenodo.5524913\n",
- "URL: https://zenodo.org/record/5524913\n",
- "Description:\n",
- "<p>ESCAPE OSSR library</p>\n",
- "\n",
- "<ul>\n",
- "\t<li>Code: <a href=\"https://gitlab.in2p3.fr/escape2020/wp3/eossr\">https://gitlab.in2p3.fr/escape2020/wp3/eossr</a></li>\n",
- "\t<li>Documentation: <a href=\"https://escape2020.pages.in2p3.fr/wp3/eossr/\">https://escape2020.pages.in2p3.fr/wp3/eossr/</a></li>\n",
- "</ul>\n",
- "\n",
- "\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"record.print_info()"
]
@@ -354,7 +141,7 @@
},
{
"cell_type": "code",
- "execution_count": 8,
+ "execution_count": null,
"id": "3a3dc135",
"metadata": {},
"outputs": [],
@@ -364,22 +151,10 @@
},
{
"cell_type": "code",
- "execution_count": 9,
+ "execution_count": null,
"id": "0aa0deec",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "Record #3743489 : ESCAPE the maze\n",
- "Record #4923992 : ESCAPE template project\n",
- "Record #5093909 : ESCAPE Data Science Summer School 2021\n",
- "Record #5524913 : eossr\n",
- "Record #4044010 : EOSC - a tool for enabling Open Science in Europe\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"for r in escape_records:\n",
" print(r)"
@@ -395,21 +170,10 @@
},
{
"cell_type": "code",
- "execution_count": 10,
+ "execution_count": null,
"id": "f5cb8f77",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "2"
- ]
- },
- "execution_count": 10,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"cta_records = get_ossr_records(keywords='CTA')\n",
"len(cta_records)"
@@ -417,19 +181,10 @@
},
{
"cell_type": "code",
- "execution_count": 11,
+ "execution_count": null,
"id": "019f21eb",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "Record #4419866 : IndexedConv/IndexedConv: v1.3\n",
- "Record #3659184 : ctapipe_io_mchdf5\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"for record in cta_records:\n",
" print(record)"
@@ -454,7 +209,7 @@
},
{
"cell_type": "code",
- "execution_count": 12,
+ "execution_count": null,
"id": "eb048c8f",
"metadata": {},
"outputs": [],
@@ -464,7 +219,7 @@
},
{
"cell_type": "code",
- "execution_count": 13,
+ "execution_count": null,
"id": "8a162ccb",
"metadata": {},
"outputs": [],
@@ -474,18 +229,10 @@
},
{
"cell_type": "code",
- "execution_count": 14,
+ "execution_count": null,
"id": "81b76847",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "Record #4923992 : ESCAPE template project\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"print(record)"
]
@@ -518,90 +265,10 @@
},
{
"cell_type": "code",
- "execution_count": 15,
+ "execution_count": null,
"id": "1431eb41",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "{'@context': 'https://doi.org/10.5063/schema/codemeta-2.0',\n",
- " '@type': 'SoftwareSourceCode',\n",
- " 'name': 'ESCAPE template project',\n",
- " 'description': 'An example of software project template for the ESCAPE 2020 European project',\n",
- " 'keywords': ['ESCAPE', 'jupyter-notebook'],\n",
- " 'license': 'https://spdx.org/licenses/MIT',\n",
- " 'identifier': '10.5281/zenodo.3884963',\n",
- " 'softwareVersion': 'v2.2',\n",
- " 'developmentStatus': 'active',\n",
- " 'codeRepository': 'https://gitlab.in2p3.fr/escape2020/wp3/template_project_escape',\n",
- " 'runtimePlatform': 'Python >3.6',\n",
- " 'downloadUrl': 'https://gitlab.in2p3.fr/escape2020/wp3/template_project_escape/-/archive/v2.2/template_project_escape-v2.2.tar.gz',\n",
- " 'installUrl': 'https://gitlab.in2p3.fr/escape2020/wp3/template_project_escape/-/blob/master/setup.py',\n",
- " 'releaseNotes': 'Jupyter Notebooks example added. Example of how to automatise the upload of the docker image - whose container was built and published during the CI - to Zenodo.',\n",
- " 'dateCreated': '2019-11-05',\n",
- " 'datePublished': '2021-06-10',\n",
- " 'dateModified': '2021-05-25',\n",
- " 'isAccessibleForFree': True,\n",
- " 'isPartOf': ['https://gitlab.in2p3.fr/escape2020',\n",
- " 'https://projectescape.eu/'],\n",
- " 'contIntegration': 'https://gitlab.in2p3.fr/escape2020/wp3/template_project_escape/-/pipelines',\n",
- " 'buildInstructions': 'https://gitlab.in2p3.fr/escape2020/wp3/template_project_escape/-/blob/master/README.md',\n",
- " 'issueTracker': 'https://gitlab.in2p3.fr/escape2020/wp3/template_project_escape/-/issues',\n",
- " 'readme': 'https://gitlab.in2p3.fr/escape2020/wp3/template_project_escape/-/blob/master/README.md',\n",
- " 'programmingLanguage': [{'@type': 'ComputerLanguage',\n",
- " 'name': 'Python',\n",
- " 'url': 'https://www.python.org/'},\n",
- " {'@type': 'ComputerLanguage',\n",
- " 'name': 'Bash',\n",
- " 'url': 'https://www.gnu.org/software/bash/'}],\n",
- " 'softwareRequirements': [{'@type': 'SoftwareApplication',\n",
- " 'identifier': 'numpy',\n",
- " 'name': 'numpy',\n",
- " 'softwareVersion': '1.18.1'},\n",
- " {'@type': 'SoftwareApplication',\n",
- " 'identifier': 'requests',\n",
- " 'name': 'requests',\n",
- " 'softwareVersion': '>=3.6'},\n",
- " {'@type': 'SoftwareApplication',\n",
- " 'identifier': 'pytest',\n",
- " 'name': 'pytest',\n",
- " 'softwareVersion': '>=5.4.2'},\n",
- " {'@type': 'SoftwareApplication',\n",
- " 'identifier': 'pyyaml',\n",
- " 'name': 'pyyaml',\n",
- " 'softwareVersion': '>=5.3.1'}],\n",
- " 'maintainer': {'@type': 'Person',\n",
- " '@id': 'https://orcid.org/0000-0003-2224-4594',\n",
- " 'givenName': 'Enrique',\n",
- " 'familyName': 'Garcia',\n",
- " 'email': 'garcia@lapp.in2p3.fr',\n",
- " 'affiliation': {'@type': 'Organization', 'name': 'LAPP, CNRS'}},\n",
- " 'author': [{'@type': 'Person',\n",
- " '@id': 'https://orcid.org/0000-0003-2224-4594',\n",
- " 'givenName': 'Enrique',\n",
- " 'familyName': 'Garcia',\n",
- " 'email': 'garcia@lapp.in2p3.fr',\n",
- " 'affiliation': {'@type': 'Organization', 'name': 'LAPP, CNRS'}}],\n",
- " 'contributor': [{'@type': 'Person',\n",
- " '@id': 'https://orcid.org/0000-0002-5686-2078',\n",
- " 'givenName': 'Thomas',\n",
- " 'familyName': 'Vuillaume',\n",
- " 'email': 'vuillaume@lapp.in2p3.fr',\n",
- " 'affiliation': {'@type': 'Organization', 'name': 'LAPP, CNRS'}}],\n",
- " 'funder': [{'@type': 'Organization',\n",
- " 'name': 'ESCAPE: European Science Cluster of Astronomy & Particle physics ESFRI research infrastructures',\n",
- " 'funder': {'@type': 'Organization',\n",
- " '@id': 'https://doi.org/10.13039/501100000780',\n",
- " 'name': 'European Commission'}}],\n",
- " 'funding': '824064'}"
- ]
- },
- "execution_count": 15,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"record.get_codemeta()"
]
@@ -625,21 +292,10 @@
},
{
"cell_type": "code",
- "execution_count": 16,
+ "execution_count": null,
"id": "7cf9bcdb",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "'https://mybinder.org/v2/zenodo/10.5281/zenodo.3572654'"
- ]
- },
- "execution_count": 16,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"record.get_mybinder_url()"
]
diff --git a/examples/notebooks/ossr_api-Upload_records_OSSR.ipynb b/examples/notebooks/ossr_api-Upload_records_OSSR.ipynb
index c771da50b17f7e6abe4bafc21af000d8aaa7849c..8ec41533059b9b0d45b2ed3c0611bd8e9794ea1b 100644
--- a/examples/notebooks/ossr_api-Upload_records_OSSR.ipynb
+++ b/examples/notebooks/ossr_api-Upload_records_OSSR.ipynb
@@ -22,7 +22,7 @@
},
{
"cell_type": "code",
- "execution_count": 19,
+ "execution_count": null,
"id": "52aedbb2",
"metadata": {},
"outputs": [],
@@ -32,7 +32,7 @@
},
{
"cell_type": "code",
- "execution_count": 2,
+ "execution_count": null,
"id": "6fcd7ef2",
"metadata": {},
"outputs": [],
@@ -63,7 +63,7 @@
},
{
"cell_type": "code",
- "execution_count": 3,
+ "execution_count": null,
"id": "83075f0b",
"metadata": {},
"outputs": [],
@@ -91,7 +91,7 @@
},
{
"cell_type": "code",
- "execution_count": 4,
+ "execution_count": null,
"id": "22f8e2b2",
"metadata": {},
"outputs": [],
@@ -101,19 +101,10 @@
},
{
"cell_type": "code",
- "execution_count": 5,
+ "execution_count": null,
"id": "07fd3360",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "HTTP Status Code: 201 - Created.\n",
- "Request succeeded. Response included. Usually sent for POST requests.\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"status_new_entry = ZenodoHTTPStatus(new_entry.status_code, new_entry.json())\n",
"print(status_new_entry)"
@@ -131,7 +122,7 @@
},
{
"cell_type": "code",
- "execution_count": 6,
+ "execution_count": null,
"id": "74351af6",
"metadata": {},
"outputs": [],
@@ -144,19 +135,10 @@
},
{
"cell_type": "code",
- "execution_count": 7,
+ "execution_count": null,
"id": "a836e493",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "HTTP Status Code: 200 - OK.\n",
- "Request succeeded. Response included. Usually sent for GET/PUT/PATCH requests.\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"status_upload = ZenodoHTTPStatus(upload_file.status_code, upload_file.json())\n",
"print(status_upload)"
@@ -182,7 +164,7 @@
},
{
"cell_type": "code",
- "execution_count": 8,
+ "execution_count": null,
"id": "c622d5c9",
"metadata": {},
"outputs": [],
@@ -192,7 +174,7 @@
},
{
"cell_type": "code",
- "execution_count": 9,
+ "execution_count": null,
"id": "d0b1af6d",
"metadata": {},
"outputs": [],
@@ -203,63 +185,10 @@
},
{
"cell_type": "code",
- "execution_count": 10,
+ "execution_count": null,
"id": "9f3cfedc",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "{\r\n",
- " \"access_right\": \"open\",\r\n",
- " \"communities\": [\r\n",
- " {\r\n",
- " \"identifier\": \"escape2020\"\r\n",
- " }\r\n",
- " ],\r\n",
- " \"creators\": [\r\n",
- " {\r\n",
- " \"affiliation\": \"LAPP, CNRS\",\r\n",
- " \"name\": \"Vuillaume, Thomas\",\r\n",
- " \"orcid\": \"0000-0002-5686-2078\"\r\n",
- " },\r\n",
- " {\r\n",
- " \"affiliation\": \"LAPP, CNRS\",\r\n",
- " \"name\": \"Garcia, Enrique\",\r\n",
- " \"orcid\": \"0000-0003-2224-4594\"\r\n",
- " },\r\n",
- " {\r\n",
- " \"affiliation\": \"GSI\",\r\n",
- " \"name\": \"Tacke, Christian\",\r\n",
- " \"orcid\": \"0000-0002-5321-8404\"\r\n",
- " },\r\n",
- " {\r\n",
- " \"affiliation\": \"ECAP, FAU (Nuremberg, Germany)\",\r\n",
- " \"name\": \"G\\u00e1l, Tam\\u00e1s\",\r\n",
- " \"orcid\": \"0000-0001-7821-8673\"\r\n",
- " }\r\n",
- " ],\r\n",
- " \"description\": \"ESCAPE OSSR library\",\r\n",
- " \"grants\": [\r\n",
- " {\r\n",
- " \"id\": \"10.13039/501100000780::824064\"\r\n",
- " }\r\n",
- " ],\r\n",
- " \"keywords\": [\r\n",
- " \"jupyter-notebook\"\r\n",
- " ],\r\n",
- " \"language\": \"eng\",\r\n",
- " \"license\": \"MIT\",\r\n",
- " \"notes\": \"Release Notes: \",\r\n",
- " \"publication_date\": \"2021-09-23\",\r\n",
- " \"title\": \"eossr\",\r\n",
- " \"upload_type\": \"software\",\r\n",
- " \"version\": \"v0.2\"\r\n",
- "}"
- ]
- }
- ],
+ "outputs": [],
"source": [
"# Let's have a look to the output to the .zenodo.json file\n",
"! cat .zenodo.json"
@@ -267,7 +196,7 @@
},
{
"cell_type": "code",
- "execution_count": 11,
+ "execution_count": null,
"id": "7c37dc70",
"metadata": {},
"outputs": [],
@@ -279,19 +208,10 @@
},
{
"cell_type": "code",
- "execution_count": 12,
+ "execution_count": null,
"id": "ae6554d9",
"metadata": {},
- "outputs": [
- {
- "name": "stdout",
- "output_type": "stream",
- "text": [
- "HTTP Status Code: 200 - OK.\n",
- "Request succeeded. Response included. Usually sent for GET/PUT/PATCH requests.\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"status_metadata = ZenodoHTTPStatus(update_metadata_info.status_code, update_metadata_info.json())\n",
"print(status_metadata)"
@@ -317,76 +237,10 @@
},
{
"cell_type": "code",
- "execution_count": 13,
+ "execution_count": null,
"id": "4389a073",
- "metadata": {
- "scrolled": true
- },
- "outputs": [
- {
- "data": {
- "text/plain": [
- "{'conceptrecid': '925643',\n",
- " 'created': '2021-09-28T08:24:19.636324+00:00',\n",
- " 'doi': '',\n",
- " 'doi_url': 'https://doi.org/',\n",
- " 'files': [{'checksum': '20d7ce7abc06541bed2655f19edfb956',\n",
- " 'filename': 'codemeta.json',\n",
- " 'filesize': 3271,\n",
- " 'id': '635a061a-dbad-42dc-af7e-4815597e4570',\n",
- " 'links': {'download': 'https://sandbox.zenodo.org/api/files/5c5ca785-e9a0-4b29-8c84-9b75f37ac963/codemeta.json',\n",
- " 'self': 'https://sandbox.zenodo.org/api/deposit/depositions/925644/files/635a061a-dbad-42dc-af7e-4815597e4570'}}],\n",
- " 'id': 925644,\n",
- " 'links': {'bucket': 'https://sandbox.zenodo.org/api/files/5c5ca785-e9a0-4b29-8c84-9b75f37ac963',\n",
- " 'discard': 'https://sandbox.zenodo.org/api/deposit/depositions/925644/actions/discard',\n",
- " 'edit': 'https://sandbox.zenodo.org/api/deposit/depositions/925644/actions/edit',\n",
- " 'files': 'https://sandbox.zenodo.org/api/deposit/depositions/925644/files',\n",
- " 'html': 'https://sandbox.zenodo.org/deposit/925644',\n",
- " 'latest_draft': 'https://sandbox.zenodo.org/api/deposit/depositions/925644',\n",
- " 'latest_draft_html': 'https://sandbox.zenodo.org/deposit/925644',\n",
- " 'newversion': 'https://sandbox.zenodo.org/api/deposit/depositions/925644/actions/newversion',\n",
- " 'publish': 'https://sandbox.zenodo.org/api/deposit/depositions/925644/actions/publish',\n",
- " 'registerconceptdoi': 'https://sandbox.zenodo.org/api/deposit/depositions/925644/actions/registerconceptdoi',\n",
- " 'self': 'https://sandbox.zenodo.org/api/deposit/depositions/925644'},\n",
- " 'metadata': {'access_right': 'open',\n",
- " 'communities': [{'identifier': 'escape2020'}],\n",
- " 'creators': [{'affiliation': 'LAPP, CNRS',\n",
- " 'name': 'Vuillaume, Thomas',\n",
- " 'orcid': '0000-0002-5686-2078'},\n",
- " {'affiliation': 'LAPP, CNRS',\n",
- " 'name': 'Garcia, Enrique',\n",
- " 'orcid': '0000-0003-2224-4594'},\n",
- " {'affiliation': 'GSI',\n",
- " 'name': 'Tacke, Christian',\n",
- " 'orcid': '0000-0002-5321-8404'},\n",
- " {'affiliation': 'ECAP, FAU (Nuremberg, Germany)',\n",
- " 'name': 'Gál, Tamás',\n",
- " 'orcid': '0000-0001-7821-8673'}],\n",
- " 'description': 'ESCAPE OSSR library',\n",
- " 'doi': '',\n",
- " 'grants': [{'id': '10.13039/501100000780::824064'}],\n",
- " 'keywords': ['jupyter-notebook'],\n",
- " 'language': 'eng',\n",
- " 'license': 'MIT',\n",
- " 'notes': 'Release Notes:',\n",
- " 'prereserve_doi': {'doi': '10.5072/zenodo.925644', 'recid': 925644},\n",
- " 'publication_date': '2021-09-23',\n",
- " 'title': 'eossr',\n",
- " 'upload_type': 'software',\n",
- " 'version': 'v0.2'},\n",
- " 'modified': '2021-09-28T08:24:20.541025+00:00',\n",
- " 'owner': 34397,\n",
- " 'record_id': 925644,\n",
- " 'state': 'unsubmitted',\n",
- " 'submitted': False,\n",
- " 'title': 'eossr'}"
- ]
- },
- "execution_count": 13,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "metadata": {},
+ "outputs": [],
"source": [
"update_metadata_info.json()"
]
@@ -401,26 +255,10 @@
},
{
"cell_type": "code",
- "execution_count": 14,
+ "execution_count": null,
"id": "f0328d01",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "[{'checksum': '20d7ce7abc06541bed2655f19edfb956',\n",
- " 'filename': 'codemeta.json',\n",
- " 'filesize': 3271,\n",
- " 'id': '635a061a-dbad-42dc-af7e-4815597e4570',\n",
- " 'links': {'download': 'https://sandbox.zenodo.org/api/files/5c5ca785-e9a0-4b29-8c84-9b75f37ac963/codemeta.json',\n",
- " 'self': 'https://sandbox.zenodo.org/api/deposit/depositions/925644/files/635a061a-dbad-42dc-af7e-4815597e4570'}}]"
- ]
- },
- "execution_count": 14,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"update_metadata_info.json()['files']"
]
@@ -435,46 +273,10 @@
},
{
"cell_type": "code",
- "execution_count": 15,
+ "execution_count": null,
"id": "7111b368",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "{'access_right': 'open',\n",
- " 'communities': [{'identifier': 'escape2020'}],\n",
- " 'creators': [{'affiliation': 'LAPP, CNRS',\n",
- " 'name': 'Vuillaume, Thomas',\n",
- " 'orcid': '0000-0002-5686-2078'},\n",
- " {'affiliation': 'LAPP, CNRS',\n",
- " 'name': 'Garcia, Enrique',\n",
- " 'orcid': '0000-0003-2224-4594'},\n",
- " {'affiliation': 'GSI',\n",
- " 'name': 'Tacke, Christian',\n",
- " 'orcid': '0000-0002-5321-8404'},\n",
- " {'affiliation': 'ECAP, FAU (Nuremberg, Germany)',\n",
- " 'name': 'Gál, Tamás',\n",
- " 'orcid': '0000-0001-7821-8673'}],\n",
- " 'description': 'ESCAPE OSSR library',\n",
- " 'doi': '',\n",
- " 'grants': [{'id': '10.13039/501100000780::824064'}],\n",
- " 'keywords': ['jupyter-notebook'],\n",
- " 'language': 'eng',\n",
- " 'license': 'MIT',\n",
- " 'notes': 'Release Notes:',\n",
- " 'prereserve_doi': {'doi': '10.5072/zenodo.925644', 'recid': 925644},\n",
- " 'publication_date': '2021-09-23',\n",
- " 'title': 'eossr',\n",
- " 'upload_type': 'software',\n",
- " 'version': 'v0.2'}"
- ]
- },
- "execution_count": 15,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"update_metadata_info.json()['metadata']"
]
@@ -500,7 +302,7 @@
},
{
"cell_type": "code",
- "execution_count": 16,
+ "execution_count": null,
"id": "6a9f1f09",
"metadata": {},
"outputs": [],
@@ -513,7 +315,7 @@
},
{
"cell_type": "code",
- "execution_count": 17,
+ "execution_count": null,
"id": "ec4570b6",
"metadata": {},
"outputs": [],
@@ -523,21 +325,10 @@
},
{
"cell_type": "code",
- "execution_count": 18,
+ "execution_count": null,
"id": "3691016e",
"metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "'Request succeeded. No response included. Usually sent for DELETE requests'"
- ]
- },
- "execution_count": 18,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
+ "outputs": [],
"source": [
"ZenodoHTTPStatus(erase_entry.status_code).description"
]