diff --git a/Overlap/Analysis/extract_component_nx.py b/Overlap/Analysis/extract_component_nx.py index e7f49d0b936d966f43f1ecebae566856372b1eb6..cb3cc0fd3facf46fc5d31e280c2725ff094c2b1b 100755 --- a/Overlap/Analysis/extract_component_nx.py +++ b/Overlap/Analysis/extract_component_nx.py @@ -10,7 +10,6 @@ given as argument of the script. """ import networkx as nx -from networkx import nx_agraph import report_graph @@ -54,7 +53,4 @@ if __name__ == "__main__": len_H = len(H) print("Number of nodes:", len_H) print("Number of edges:", H.number_of_edges()) - A = nx_agraph.to_agraph(H) - report_graph.partition_graph_date(A, H.graph["e_overestim"]) - A.write("eddy_graph.gv") - print('Created file "eddy_graph.gv".') + nx.write_edgelist(H, "component.csv", data = False)