diff --git a/CMakeLists.txt b/CMakeLists.txt
index 0befc6047512a5d7dd5d1fc1df109a40ece1496c..6c994cd9e0f18c1f7e06666ec24a88d744283d45 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -30,6 +30,15 @@ if(CMAKE_Fortran_COMPILER_ID MATCHES GNU)
endif()
endif()
+# test_write_eddy
+add_executable(test_write_eddy test_write_eddy.f90)
+target_link_libraries(test_write_eddy PRIVATE Shapelib_03::shapelib_03
+ Contour_531::contour_531 Jumble::jumble)
+set_target_properties(test_write_eddy PROPERTIES Fortran_MODULE_DIRECTORY
+ ${CMAKE_CURRENT_BINARY_DIR}/${my_target}_modules)
+target_include_directories(test_write_eddy PRIVATE
+ ${CMAKE_CURRENT_BINARY_DIR}/${my_target}_modules)
+
add_subdirectory(Inst_eddies)
add_subdirectory(Overlap)
diff --git a/Common/CMakeLists.txt b/Common/CMakeLists.txt
index 910d9ca58e584d9fdbbe0e923a0b132506dd0ded..9971726efc68115815babed4b6fbb1a7bfe6dec2 100644
--- a/Common/CMakeLists.txt
+++ b/Common/CMakeLists.txt
@@ -1,44 +1,36 @@
add_subdirectory(Tests)
target_sources(test_get_1_outerm PRIVATE derived_types.f90 get_slice_dir.f90
- spher_polyline_area.f90 shpc_create.f90 write_eddy.f90 shpc_close.f90
- ccw_orient.f90)
+ spher_polyline_area.f90 shpc_close.f90)
target_sources(test_set_all_outerm PRIVATE derived_types.f90 get_slice_dir.f90
- spher_polyline_area.f90 shpc_create.f90 write_eddy.f90 shpc_close.f90
- ccw_orient.f90 write_snapshot.f90)
+ spher_polyline_area.f90 shpc_close.f90)
target_sources(test_max_speed_contour_ssh PRIVATE derived_types.f90)
-target_sources(test_nearby_extr PRIVATE derived_types.f90 read_snapshot.f90
- read_eddy.f90 read_field_indices.f90 shpc_open.f90 shpc_close.f90
- get_slice_dir.f90 read_grid.F90)
+target_sources(test_nearby_extr PRIVATE derived_types.f90
+ read_field_indices.f90 shpc_open.f90 shpc_close.f90
+ get_slice_dir.f90)
target_sources(test_set_max_speed PRIVATE derived_types.f90 get_slice_dir.f90
- spher_polyline_area.f90 shpc_open.f90 shpc_close.f90 read_field_indices.f90
- read_eddy.f90 shpc_create.f90 write_eddy.f90 ccw_orient.f90)
+ spher_polyline_area.f90 shpc_open.f90 shpc_close.f90 read_field_indices.f90)
target_sources(test_spher_polyline_area PRIVATE spher_polyline_area.f90)
-target_sources(inst_eddies PRIVATE write_eddy.f90 spher_polyline_area.f90
- derived_types.f90 shpc_create.f90 shpc_close.f90 shpc_open.f90
- get_slice_dir.f90 read_field_indices.f90 write_snapshot.f90 ccw_orient.f90)
+target_sources(inst_eddies PRIVATE spher_polyline_area.f90
+ derived_types.f90 shpc_close.f90 shpc_open.f90
+ get_slice_dir.f90 read_field_indices.f90)
target_sources(test_write_eddy PRIVATE derived_types.f90 shpc_open.f90
- shpc_close.f90 read_field_indices.f90 shpc_create.f90 get_slice_dir.f90)
+ shpc_close.f90 read_field_indices.f90 get_slice_dir.f90)
if(MPI_Fortran_HAVE_F08_MODULE)
- target_sources(test_overlap PRIVATE derived_types.f90 read_snapshot.f90
- spher_polyline_area.f90 read_eddy.f90 read_field_indices.f90 write_eddy.f90
- shpc_open.f90 shpc_close.f90 get_slice_dir.f90 read_grid.F90)
- target_sources(test_read_snapshot PRIVATE derived_types.f90 shpc_create.f90
- read_snapshot.f90 write_eddy.f90 read_eddy.f90 read_field_indices.f90
- shpc_open.f90 shpc_close.f90 get_slice_dir.f90 write_snapshot.f90)
+ target_sources(test_overlap PRIVATE derived_types.f90 spher_polyline_area.f90
+ read_field_indices.f90 shpc_open.f90 shpc_close.f90 get_slice_dir.f90)
+ target_sources(test_read_snapshot PRIVATE derived_types.f90
+ read_field_indices.f90
+ shpc_open.f90 shpc_close.f90 get_slice_dir.f90)
target_sources(test_spher_polygon_area PRIVATE spher_polyline_area.f90)
- target_sources(test_read_eddy PRIVATE derived_types.f90 shpc_create.f90
- read_eddy.f90 write_eddy.f90 read_field_indices.f90 shpc_open.f90
+ target_sources(test_read_eddy PRIVATE derived_types.f90
+ read_field_indices.f90 shpc_open.f90
shpc_close.f90 get_slice_dir.f90)
target_sources(test_send_recv PRIVATE read_field_indices.f90
- read_snapshot.f90 write_eddy.f90 shpc_create.f90 read_eddy.f90
- derived_types.f90 shpc_open.f90 shpc_close.f90 get_slice_dir.f90
- write_snapshot.f90)
+ derived_types.f90 shpc_open.f90 shpc_close.f90 get_slice_dir.f90)
target_sources(test_get_dispatch_snap PRIVATE read_field_indices.f90
- read_snapshot.f90 shpc_create.f90 write_eddy.f90 read_eddy.f90
- derived_types.f90 shpc_open.f90 shpc_close.f90 get_slice_dir.f90
- write_snapshot.f90)
+ derived_types.f90 shpc_open.f90 shpc_close.f90 get_slice_dir.f90)
target_sources(eddy_graph PRIVATE shpc_open.f90 shpc_close.f90
- read_field_indices.f90 read_snapshot.f90 spher_polyline_area.f90
- read_eddy.f90 derived_types.f90 get_slice_dir.f90 read_grid.F90)
+ read_field_indices.f90 spher_polyline_area.f90
+ derived_types.f90 get_slice_dir.f90)
endif()
diff --git a/Inst_eddies/CMakeLists.txt b/Inst_eddies/CMakeLists.txt
index e978fa09622f2afee065909439bae39f2a6cb2ca..5d42c1f2a295b92ee9d09fbf5106037e33b5d6e2 100644
--- a/Inst_eddies/CMakeLists.txt
+++ b/Inst_eddies/CMakeLists.txt
@@ -2,7 +2,8 @@
add_executable(inst_eddies inst_eddies.f90 local_extrema.f90 set_max_speed.f90
get_1_outerm.f90 max_speed_contour_ssh.f90 good_contour.f90 mean_speed.f90
inside_4.f90 set_all_outerm.f90 nearby_extr.f90 get_var.f90 config.f90
- input_ssh.f90)
+ input_ssh.f90 shpc_create.f90 write_snapshot.f90 ccw_orient.f90
+ write_eddy.f90)
target_link_libraries(inst_eddies PRIVATE Contour_531::contour_531
Geometry::geometry NetCDF95::netcdf95 Shapelib_03::shapelib_03
Numer_Rec_95::numer_rec_95 Jumble::jumble NetCDF_Fortran::netcdff)
@@ -18,10 +19,12 @@ file(COPY inst_eddies_Aviso.py DESTINATION . FILE_PERMISSIONS
# Tests:
add_subdirectory(Tests)
target_sources(test_get_1_outerm PRIVATE get_1_outerm.f90 good_contour.f90
- config.f90 input_ssh.f90 get_var.f90)
-target_sources(test_set_all_outerm PRIVATE set_all_outerm.f90
- local_extrema.f90 get_1_outerm.f90 good_contour.f90 nearby_extr.f90
- get_var.f90 config.f90 input_ssh.f90)
+ config.f90 input_ssh.f90 get_var.f90 shpc_create.f90 write_eddy.f90
+ ccw_orient.f90)
+target_sources(test_set_all_outerm PRIVATE set_all_outerm.f90 local_extrema.f90
+ get_1_outerm.f90 good_contour.f90 nearby_extr.f90 get_var.f90 config.f90
+ input_ssh.f90 shpc_create.f90 write_snapshot.f90 ccw_orient.f90
+ write_eddy.f90)
target_sources(test_good_contour PRIVATE good_contour.f90)
target_sources(test_inside_4 PRIVATE inside_4.f90)
target_sources(test_mean_speed PRIVATE mean_speed.f90)
@@ -30,5 +33,8 @@ target_sources(test_max_speed_contour_ssh PRIVATE max_speed_contour_ssh.f90
target_sources(test_nearby_extr PRIVATE nearby_extr.f90)
target_sources(test_local_extrema PRIVATE local_extrema.f90)
target_sources(test_set_max_speed PRIVATE set_max_speed.f90 good_contour.f90
- max_speed_contour_ssh.f90 mean_speed.f90 inside_4.f90 get_var.f90
- config.f90 input_ssh.f90)
+ max_speed_contour_ssh.f90 mean_speed.f90 inside_4.f90 get_var.f90 config.f90
+ input_ssh.f90 shpc_create.f90 ccw_orient.f90 write_eddy.f90)
+target_sources(test_write_eddy PRIVATE shpc_create.f90)
+add_executable(test_read_snapshot shpc_create.f90 write_snapshot.f90
+ write_eddy.f90)
diff --git a/Inst_eddies/Tests/CMakeLists.txt b/Inst_eddies/Tests/CMakeLists.txt
index acd92c4171cb2853af42fc6aca5c4470093b08e0..02ac6f22b18ff56a9cfdef73da00c4eb58620fc1 100644
--- a/Inst_eddies/Tests/CMakeLists.txt
+++ b/Inst_eddies/Tests/CMakeLists.txt
@@ -53,15 +53,9 @@ target_link_libraries(test_set_max_speed PRIVATE Geometry::geometry
Shapelib_03::shapelib_03 Contour_531::contour_531 Jumble::jumble
NetCDF_Fortran::netcdff gpc_f)
-# test_write_eddy
-add_executable(test_write_eddy test_write_eddy.f90)
-target_link_libraries(test_write_eddy PRIVATE Shapelib_03::shapelib_03
- Contour_531::contour_531 Jumble::jumble)
-
foreach(my_target IN ITEMS test_get_1_outerm test_set_all_outerm
- test_good_contour test_inside_4 test_mean_speed
- test_max_speed_contour_ssh test_nearby_extr test_local_extrema
- test_set_max_speed test_write_eddy)
+ test_good_contour test_inside_4 test_mean_speed test_max_speed_contour_ssh
+ test_nearby_extr test_local_extrema test_set_max_speed)
set_target_properties(${my_target} PROPERTIES Fortran_MODULE_DIRECTORY
${CMAKE_CURRENT_BINARY_DIR}/${my_target}_modules)
target_include_directories(${my_target} PRIVATE
diff --git a/Overlap/CMakeLists.txt b/Overlap/CMakeLists.txt
index 0e3c5422e55b07cc1432a1220cafce48a41e231d..06be4a9ab3df329be0563abe2d3a87f049dc53cd 100644
--- a/Overlap/CMakeLists.txt
+++ b/Overlap/CMakeLists.txt
@@ -6,7 +6,8 @@ if(MPI_Fortran_HAVE_F08_MODULE)
# eddy_graph:
add_executable(eddy_graph eddy_graph.f90 get_snapshot.f90 overlap.f90
dispatch_snapshot.f90 recv_snapshot.f90 candidate_overlap.f90
- spher_polygon_area.f90 send_snapshot.f90 unit_edge_m.f90 config_graph.F90)
+ spher_polygon_area.f90 send_snapshot.f90 unit_edge_m.f90 config_graph.F90
+ read_grid.F90 read_snapshot.f90 read_eddy.f90)
target_link_libraries(eddy_graph PRIVATE EZMPI::ezmpi Jumble::jumble
Shapelib_03::shapelib_03 Contour_531::contour_531 gpc_f Geometry::geometry
MPI::MPI_Fortran Numer_Rec_95::numer_rec_95)
@@ -19,8 +20,13 @@ endif()
add_subdirectory(Tests)
target_sources(test_overlap PRIVATE overlap.f90 spher_polygon_area.f90
- candidate_overlap.f90 unit_edge_m.f90 config_graph.F90)
+ candidate_overlap.f90 unit_edge_m.f90 config_graph.F90 read_grid.F90
+ read_snapshot.f90 read_eddy.f90)
target_sources(test_spher_polygon_area PRIVATE spher_polygon_area.f90)
+target_sources(test_nearby_extr PRIVATE read_grid.F90 read_snapshot.f90
+ read_eddy.f90)
+target_sources(test_set_max_speed PRIVATE read_eddy.f90)
+target_sources(test_read_snapshot PRIVATE read_snapshot.f90 read_eddy.f90)
if(MPI_Fortran_HAVE_F08_MODULE)
target_sources(test_send_recv PRIVATE send_snapshot.f90 recv_snapshot.f90)
diff --git a/Overlap/Tests/CMakeLists.txt b/Overlap/Tests/CMakeLists.txt
index 3dff2f4aaad69b98e93374ec8305cf4bd73403d5..90ad823fee8505ca9f5eb00671007e549ab1511f 100644
--- a/Overlap/Tests/CMakeLists.txt
+++ b/Overlap/Tests/CMakeLists.txt
@@ -2,9 +2,11 @@
add_executable(test_overlap test_overlap.f90)
target_link_libraries(test_overlap Shapelib_03::shapelib_03 Geometry::geometry
Contour_531::contour_531 gpc_f Jumble::jumble Numer_Rec_95::numer_rec_95)
+target_compile_definitions(test_overlap PRIVATE SEQUENTIAL)
# test_read_snapshot
-add_executable(test_read_snapshot test_read_snapshot.f90 save_snapshot.f90)
+target_sources(test_read_snapshot PRIVATE test_read_snapshot.f90
+ save_snapshot.f90)
target_link_libraries(test_read_snapshot NetCDF95::netcdf95
Shapelib_03::shapelib_03 Contour_531::contour_531 gpc_f
Jumble::jumble NetCDF_Fortran::netcdff Numer_Rec_95::numer_rec_95)