# # Reads ans manages the model grid # import numpy as np from netCDF4 import Dataset # Doc : https://spacetelescope.github.io/spherical_geometry/api/spherical_geometry.polygon.SphericalPolygon.html from spherical_geometry import polygon import RPPtools as RPP # import configparser config=configparser.ConfigParser() config.read("run.def") EarthRadius=config.getfloat("OverAll", "EarthRadius") # import getargs log_master, log_world = getargs.getLogger(__name__) INFO, DEBUG, ERROR = log_master.info, log_master.debug, log_world.error INFO_ALL, DEBUG_ALL = log_world.info, log_world.debug # def getbox(ncdf, corners) : halo=0.1 ii=[np.argmin(abs(ncdf.variables["nav_lon"][0,:]-(np.min(corners[0][:])-halo))), np.argmin(abs(ncdf.variables["nav_lon"][0,:]-(np.max(corners[0][:])+halo)))] jj=[np.argmin(abs(ncdf.variables["nav_lat"][:,0]-(np.min(corners[1][:])-halo))), np.argmin(abs(ncdf.variables["nav_lat"][:,0]-(np.max(corners[1][:])+halo)))] return min(ii), max(ii), min(jj), max(jj) # # Get the corners for a regular lat/lon grid # def corners(lon, lat) : jjm,iim = lon.shape cornerspoly = [] cornersll = [] index = [] hdlon=np.mean(np.abs(np.diff(lon[0,:]))) hdlat=np.mean(np.abs(np.diff(lat[:,0]))) # for i in range(iim) : for j in range(jjm) : # boxll = RPP.boxit([lon[j,i], lat[j,i]], hdlon, hdlat, 4) # cornerspoly.append(polygon.SphericalPolygon.from_lonlat([p[0] for p in boxll], [p[1] for p in boxll], center=[lon[j,i], lat[j,i]])) # index.append([j,i]) cornersll.append(boxll) return cornersll, cornerspoly, index # def gather(x, index) : y=[] for ia in index : y.append(list(x[ia[0][i],ia[1][i]] for i in range(len(ia[0])))) return y # def getattrcontaining(nc, varname, substr) : att=[] for s in nc.variables[varname].ncattrs() : if s.lower().find(substr) >= 0 : att.append(nc.variables[varname].getncattr(s)) return att # class HydroGrid : def __init__(self, lolacorners) : # filename=config.get("OverAll", "HydroFile") INFO("Opening in HydroGrid :"+filename) self.ncfile=Dataset(filename,'r') istr, iend, jstr, jend = getbox(self.ncfile, lolacorners) self.box=[istr, iend, jstr, jend] self.lon=np.copy(self.ncfile.variables["nav_lon"][jstr:jend,istr:iend]) self.lat=np.copy(self.ncfile.variables["nav_lat"][jstr:jend,istr:iend]) self.jjm,self.iim = self.lon.shape DEBUG("# Range Lon :"+str(np.min(self.lon))+" -- "+str(np.max(self.lon))) DEBUG("# Range Lat :"+str(np.min(self.lat))+" -- "+str(np.max(self.lat))) self.polyll, self.polylist, self.index = corners(self.lon, self.lat) class HydroData : def __init__(self, nf, box, index) : istr, iend, jstr, jend = box[:] self.trip=gather(nf.variables["trip"][jstr:jend,istr:iend].astype(np.float32), index) self.tripdesc=nf.variables["trip"].long_name # self.basins=gather(nf.variables["basins"][jstr:jend,istr:iend], index) self.basinsdesc=nf.variables["basins"].long_name att = getattrcontaining(nf, "basins", "max") if len(att) > 0 : self.basinsmax=att[0] else : INFO("We need to scan full file to find maximum number of basins") self.basinsmax=np.max(np.where(nf.variables["basins"][:,:] < 1.e10)) # self.topoind=gather(nf.variables["topoind"][jstr:jend,istr:iend].astype(np.float32), index) self.topoinddesc=nf.variables["topoind"].long_name att = getattrcontaining(nf, "topoind", "min") if len(att) > 0 : self.topoindmin=att[0] else : INFO("We need to scan full file to find minimum topoind over domain") self.topoindmin=np.min(np.where(nf.variables["topoind"][:,:] < 1.e15)) # # self.topoindh=gather(nf.variables["topoind_h"][jstr:jend,istr:iend].astype(np.float32), index) self.topoindhdesc=nf.variables["topoind_h"].long_name att = getattrcontaining(nf, "topoind_h", "min") if len(att) > 0 : self.topoindhmin=att[0] else : INFO("We need to scan full file to find minimum topoind_h over domain") self.topoindhmin=np.min(np.where(nf.variables["topoind_h"][:,:] < 1.e15)) # self.disto=gather(nf.variables["disto"][jstr:jend,istr:iend].astype(np.float32), index) self.distodesc=nf.variables["disto"].long_name # self.fac=gather(nf.variables["fac"][jstr:jend,istr:iend].astype(np.float32), index) self.facdesc=nf.variables["fac"].long_name