pyPhase issueshttps://gitlab.in2p3.fr/mlanger/pyPhase/-/issues2022-10-20T14:27:43+02:00https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/99z1, z2 and/or ztot should be two-dimensional to account for different focus p...2022-10-20T14:27:43+02:00Max Langerz1, z2 and/or ztot should be two-dimensional to account for different focus positions in x/y i.e. different magnificationshttps://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/98Parameters should be stored in a structure (different number of parameters fo...2022-10-20T13:59:36+02:00Max LangerParameters should be stored in a structure (different number of parameters for different algorithmshttps://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/97NLPDHGM has no attribute 'padding'2022-10-20T10:33:55+02:00Max LangerNLPDHGM has no attribute 'padding'https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/92Implement variable step size NLCG2022-10-20T09:59:19+02:00Max LangerImplement variable step size NLCGv1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/96Syrmep dataset class2022-09-05T13:31:43+02:00Max LangerSyrmep dataset classv1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/95Context manager for file locking2021-06-03T15:52:26+02:00Max LangerContext manager for file lockinghttps://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/83Simple registration for when elastix not available2021-05-22T00:56:34+02:00Max LangerSimple registration for when elastix not availablev1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/86Multiprocessing paralleliser2021-05-22T00:42:12+02:00Max LangerMultiprocessing paralleliserv1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/85Improve implementation wrt fftshift, rfft, ...2021-05-22T00:06:15+02:00Max LangerImprove implementation wrt fftshift, rfft, ...Suggestion reviewer 1 PyPhase manuscriptSuggestion reviewer 1 PyPhase manuscripthttps://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/94CI framework+inital tests2021-04-30T16:17:41+02:00Max LangerCI framework+inital testsv1.1MOUTON CLAIREMOUTON CLAIREhttps://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/35Clean up CTF / toolbox also for 2D phase retrieval (frequency variables, ... ...2021-04-30T16:16:38+02:00Max LangerClean up CTF / toolbox also for 2D phase retrieval (frequency variables, ... I guess)https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/59Make CLI more GIT-like2021-04-30T16:16:14+02:00Max LangerMake CLI more GIT-likeChoice of sample, version & algorithm by commands (like branch a bit)
So that one can retrieve/reconstruct simply by "pyphase retrieve" "pyphase reconstruct (delta? or also a "state" parameter?")Choice of sample, version & algorithm by commands (like branch a bit)
So that one can retrieve/reconstruct simply by "pyphase retrieve" "pyphase reconstruct (delta? or also a "state" parameter?")https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/13Interface tomopy2021-04-30T16:15:46+02:00Max LangerInterface tomopyhttps://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/93Refactor/reintegrate ESRF data set2021-04-30T16:15:08+02:00Max LangerRefactor/reintegrate ESRF data setv1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/15Motion correction id16b2021-04-30T16:01:46+02:00Max LangerMotion correction id16bv1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/46Detector deconvolution2021-04-30T15:59:41+02:00Max LangerDetector deconvolutionv1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/53Utility functions for FFT, IFFT, pad, truncate, ...2021-04-30T15:58:56+02:00Max LangerUtility functions for FFT, IFFT, pad, truncate, ...Interchangeable fft packages, ...Interchangeable fft packages, ...v1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/55Separate horisontal and vertical magnification2021-04-30T15:58:29+02:00Max LangerSeparate horisontal and vertical magnificationv1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/62Add initialisation of alignment with a transform_parameters vector2021-04-30T15:58:04+02:00Max LangerAdd initialisation of alignment with a transform_parameters vectorv1.1https://gitlab.in2p3.fr/mlanger/pyPhase/-/issues/65Separate writing of files into backend class (then multiple inheritance (or ...2021-04-30T15:57:38+02:00Max LangerSeparate writing of files into backend class (then multiple inheritance (or for the different dataset objects I suppose)v1.1