diff --git a/Projects/AlPhaPha/2024/Snakefile b/Projects/AlPhaPha/2024/Snakefile new file mode 100644 index 0000000000000000000000000000000000000000..438df75facc8b90cfd3bdc842531c6a23726f08d --- /dev/null +++ b/Projects/AlPhaPha/2024/Snakefile @@ -0,0 +1,38 @@ +import os +import subprocess + +# Lire le répertoire d'entrée depuis les arguments de configuration +#input_directory = config["folder"] +input_directory = "/home/efremovt/bin/nptool/Projects/AlPhaPha/DataMacro/output/" +origin = [] +# Iterate over files in input_directory +for filename in os.listdir(input_directory): + f = os.path.join(input_directory, filename) + if f.endswith(".root"): + origin.append(filename) + +# Définir le répertoire de sortie pour les fichiers convertis +phy_directory = "/home/efremovt/bin/nptool/Projects/AlPhaPha/DataMacro/output/analysis" +#phy_directory = "./" + +# define target files directory +analysedfile = [] +for inputfile in origin: + #analysedfile.append("/home/morfouacep/Physics/NPTool/nptool/Projects/ana_e850/root/analysis/"+inputfile.replace("_raw_","_")) + analysedfile.append("/home/efremovt/bin/nptool/Projects/AlPhaPha/DataMacro/output/analysis/"+inputfile) + +## batch rules +rule all: + input: + expand("{file}",file=analysedfile) + +# Règle pour convertir les fichiers .fast dans le dossier .cat en .root +rule npanalysis: + input: + f"{input_directory}/{{name}}.root" + output: + f"{phy_directory}/{{name}}.root" + shell: + "npanalysis -T {input} RawTree -C Calibration.txt -D pista_e850_2024.detector -O {output}" + + diff --git a/Projects/AlPhaPha/2024/convert_snakemake.sh b/Projects/AlPhaPha/2024/convert_snakemake.sh new file mode 100755 index 0000000000000000000000000000000000000000..b81c889af59bd286a9c701bab259f655ed4f475c --- /dev/null +++ b/Projects/AlPhaPha/2024/convert_snakemake.sh @@ -0,0 +1,4 @@ +#!/bin/bash +echo "- executing snakemake file for npanalysis..." +snakemake --cores 8 --forceall --keep-incomplete --keep-going --rerun-incomplete +echo "- snakemake executed successfully!"