From 793e00b57186599451fe570963436762715989fc Mon Sep 17 00:00:00 2001
From: deserevi <deserevi@nptool>
Date: Mon, 28 Sep 2009 22:29:38 +0000
Subject: [PATCH] * Change terminal output concerning number of evts treated in
 NPS and NPA    - the output is now on a single line

* Add some documentation for Gaspard (not yet finished)
---
 Inputs/CrossSection/flat.txt                  | 1891 +----------------
 Inputs/EventGenerator/alpha.source            |    8 +-
 NPAnalysis/Gaspard/RunToTreat.txt             |    6 +-
 NPAnalysis/Gaspard/src/Analysis.cc            |   12 +-
 NPDocumentation/Gaspard.tex                   |   62 +-
 NPLib/IORoot/RootOutput.cxx                   |    1 +
 .../include/GaspardTrackerDummyShape.hh       |    2 +
 NPSimulation/src/EventAction.cc               |    3 +-
 TODO                                          |    1 -
 9 files changed, 172 insertions(+), 1814 deletions(-)

diff --git a/Inputs/CrossSection/flat.txt b/Inputs/CrossSection/flat.txt
index 3968c9853..58e48251d 100644
--- a/Inputs/CrossSection/flat.txt
+++ b/Inputs/CrossSection/flat.txt
@@ -1,1800 +1,91 @@
-  0.  1.8497963
-  0.100000001  1.85060704
-  0.200000003  1.85318649
-  0.300000012  1.85738742
-  0.400000006  1.86328328
-  0.5  1.87087452
-  0.600000024  1.88008702
-  0.699999988  1.890921
-  0.800000012  1.90337622
-  0.899999976  1.91730535
-  1.  1.93278253
-  1.10000002  1.9497335
-  1.20000005  1.96815848
-  1.29999995  1.98791003
-  1.39999998  2.00898838
-  1.5  2.03131938
-  1.60000002  2.0548296
-  1.70000005  2.07951927
-  1.79999995  2.10524058
-  1.89999998  2.13199353
-  2.  2.15963101
-  2.0999999  2.18807912
-  2.20000005  2.21741176
-  2.29999995  2.247334
-  2.4000001  2.27791953
-  2.5  2.309021
-  2.5999999  2.34049082
-  2.70000005  2.37240314
-  2.79999995  2.40453625
-  2.9000001  2.43689036
-  3.  2.46924472
-  3.0999999  2.50167274
-  3.20000005  2.53395343
-  3.29999995  2.56608653
-  3.4000001  2.59792495
-  3.5  2.62946844
-  3.5999999  2.66049623
-  3.70000005  2.69100809
-  3.79999995  2.72093034
-  3.9000001  2.75011539
-  4.  2.7785635
-  4.0999999  2.80612755
-  4.19999981  2.83280683
-  4.30000019  2.85845447
-  4.4000001  2.88299656
-  4.5  2.90635943
-  4.5999999  2.92854309
-  4.69999981  2.94940019
-  4.80000019  2.96893072
-  4.9000001  2.98706079
-  5.  3.00371718
-  5.0999999  3.0188992
-  5.19999981  3.03253388
-  5.30000019  3.04454708
-  5.4000001  3.05486488
-  5.5  3.06356144
-  5.5999999  3.07056308
-  5.69999981  3.07579589
-  5.80000019  3.07925963
-  5.9000001  3.08095479
-  6.  3.08080745
-  6.0999999  3.07889128
-  6.19999981  3.07513261
-  6.30000019  3.06960487
-  6.4000001  3.06216121
-  6.5  3.05294871
-  6.5999999  3.04189372
-  6.69999981  3.02907014
-  6.80000019  3.01447749
-  6.9000001  2.99804211
-  7.  2.97991204
-  7.0999999  2.96001315
-  7.19999981  2.93841887
-  7.30000019  2.91512966
-  7.4000001  2.89029288
-  7.5  2.86383462
-  7.5999999  2.83582854
-  7.69999981  2.80627489
-  7.80000019  2.77532077
-  7.9000001  2.74289298
-  8.  2.70913839
-  8.10000038  2.67413068
-  8.19999981  2.63779664
-  8.30000019  2.60035706
-  8.39999962  2.56173825
-  8.5  2.52208757
-  8.60000038  2.48140526
-  8.69999981  2.43976474
-  8.80000019  2.39723992
-  8.89999962  2.35397816
-  9.  2.30990529
-  9.10000038  2.26516962
-  9.19999981  2.21991754
-  9.30000019  2.17400241
-  9.39999962  2.12771916
-  9.5  2.08099318
-  9.60000038  2.0339725
-  9.69999981  1.98665726
-  9.80000019  1.93912077
-  9.89999962  1.89151049
-  10.  1.84382665
-  10.1000004  1.7961427
-  10.1999998  1.7486062
-  10.3000002  1.70114338
-  10.3999996  1.6539017
-  10.5  1.60688114
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-  10.6999998  1.51394534
-  10.8000002  1.468104
-  10.8999996  1.42270482
-  11.  1.37789512
-  11.1000004  1.33367515
-  11.1999998  1.29011858
-  11.3000002  1.24729872
-  11.3999996  1.20514238
-  11.5  1.16379666
-  11.6000004  1.12326169
-  11.6999998  1.08361101
-  11.8000002  1.04491866
-  11.8999996  1.00711048
-  12.  0.970260501
-  12.1000004  0.93436861
-  12.1999998  0.899582207
-  12.3000002  0.86582762
-  12.3999996  0.833104789
-  12.5  0.801487505
-  12.6000004  0.770975709
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-  12.8000002  0.71341598
-  12.8999996  0.686345935
-  13.  0.660433054
-  13.1000004  0.635684609
-  13.1999998  0.612107933
-  13.3000002  0.589703143
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-  13.5  0.548401713
-  13.6000004  0.529505014
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-  14.  0.465422869
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-  14.5  0.410265803
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-  14.8000002  0.389615029
-  14.8999996  0.384677142
-  15.  0.380660474
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-  16.5  0.411791384
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-  16.8999996  0.440932333
-  17.  0.449046731
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-  155.899994  0.00281954091
-  156.  0.00280826492
-  156.100006  0.00279610418
-  156.199997  0.00278291199
-  156.300003  0.00276876171
-  156.399994  0.0027536531
-  156.5  0.00273758639
-  156.600006  0.00272070919
-  156.699997  0.00270287367
-  156.800003  0.00268415408
-  156.899994  0.00266462332
-  157.  0.0026442823
-  157.100006  0.00262313033
-  157.199997  0.00260116765
-  157.300003  0.00257854187
-  157.399994  0.00255517894
-  157.5  0.00253115292
-  157.600006  0.00250646309
-  157.699997  0.0024811842
-  157.800003  0.00245538913
-  157.899994  0.00242900476
-  158.  0.00240217778
-  158.100006  0.00237490865
-  158.199997  0.00234719738
-  158.300003  0.00231919135
-  158.399994  0.00229081698
-  158.5  0.00226222142
-  158.600006  0.00223333109
-  158.699997  0.00220429315
-  158.800003  0.00217518164
-  158.899994  0.00214599655
-  159.  0.00211673765
-  159.100006  0.00208747876
-  159.199997  0.00205836724
-  159.300003  0.00202932954
-  159.399994  0.00200043921
-  159.5  0.00197184342
-  159.600006  0.00194346893
-  159.699997  0.00191546301
-  159.800003  0.00188782543
-  159.899994  0.00186063023
-  160.  0.00183387718
-  160.100006  0.00180771365
-  160.199997  0.00178213976
-  160.300003  0.00175715541
-  160.399994  0.00173290807
-  160.5  0.00170939777
-  160.600006  0.00168669818
-  160.699997  0.0016648093
-  160.800003  0.00164380472
-  160.899994  0.00162375835
-  161.  0.00160467008
-  161.100006  0.00158661359
-  161.199997  0.0015695889
-  161.300003  0.00155374338
-  161.399994  0.00153900334
-  161.5  0.00152551627
-  161.600006  0.00151328207
-  161.699997  0.00150222704
-  161.800003  0.00149257237
-  161.899994  0.00148424425
-  162.  0.00147731649
-  162.100006  0.00147178909
-  162.199997  0.00146766182
-  162.300003  0.00146508228
-  162.399994  0.00146397681
-  162.5  0.00146441895
-  162.600006  0.00146640884
-  162.699997  0.00146994647
-  162.800003  0.00147510541
-  162.899994  0.00148188591
-  163.  0.00149021391
-  163.100006  0.00150023727
-  163.199997  0.00151195552
-  163.300003  0.0015252952
-  163.399994  0.00154033001
-  163.5  0.00155698624
-  163.600006  0.00157533749
-  163.699997  0.00159538386
-  163.800003  0.00161712547
-  163.899994  0.00164056197
-  164.  0.00166562002
-  164.100006  0.00169229938
-  164.199997  0.00172067387
-  164.300003  0.00175066979
-  164.399994  0.00178236072
-  164.5  0.00181559962
-  164.600006  0.00185038603
-  164.699997  0.00188679376
-  164.800003  0.00192474911
-  164.899994  0.00196417863
-  165.  0.00200508209
-  165.100006  0.0020475334
-  165.199997  0.00209131115
-  165.300003  0.00213656295
-  165.399994  0.00218314142
-  165.5  0.00223104632
-  165.600006  0.00228020409
-  165.699997  0.00233061495
-  165.800003  0.00238227891
-  165.899994  0.00243504811
-  166.  0.00248892256
-  166.100006  0.00254382915
-  166.199997  0.00259984098
-  166.300003  0.00265673734
-  166.399994  0.00271451846
-  166.5  0.0027731834
-  166.600006  0.00283265929
-  166.699997  0.00289287255
-  166.800003  0.00295374845
-  166.899994  0.00301528815
-  167.  0.00307741715
-  167.100006  0.00313998852
-  167.199997  0.0032030018
-  167.300003  0.0032664577
-  167.399994  0.00333020813
-  167.5  0.00339425355
-  167.600006  0.00345844612
-  167.699997  0.00352278608
-  167.800003  0.00358727365
-  167.899994  0.00365168764
-  168.  0.0037160276
-  168.100006  0.00378029398
-  168.199997  0.00384441298
-  168.300003  0.00390823744
-  168.399994  0.00397176668
-  168.5  0.00403492758
-  168.600006  0.0040976461
-  168.699997  0.00415984914
-  168.800003  0.00422153575
-  168.899994  0.00428263331
-  169.  0.00434299326
-  169.100006  0.00440261653
-  169.199997  0.00446150312
-  169.300003  0.00451950496
-  169.399994  0.00457662251
-  169.5  0.00463278219
-  169.600006  0.0046879095
-  169.699997  0.00474200537
-  169.800003  0.00479499577
-  169.899994  0.00484680664
-  170.  0.00489736488
-  170.100006  0.00494674407
-  170.199997  0.00499479612
-  170.300003  0.00504152197
-  170.399994  0.00508684805
-  170.5  0.00513077294
-  170.600006  0.0051732976
-  170.699997  0.00521427486
-  170.800003  0.0052537783
-  170.899994  0.00529173389
-  171.  0.00532806804
-  171.100006  0.00536285434
-  171.199997  0.0053960192
-  171.300003  0.00542756263
-  171.399994  0.00545741105
-  171.5  0.00548563804
-  171.600006  0.00551209645
-  171.699997  0.00553693343
-  171.800003  0.00556000136
-  171.899994  0.00558137475
-  172.  0.00560105266
-  172.100006  0.00561896153
-  172.199997  0.00563517585
-  172.300003  0.00564969424
-  172.399994  0.00566251809
-  172.5  0.00567357335
-  172.600006  0.00568293314
-  172.699997  0.0056906715
-  172.800003  0.00569671532
-  172.899994  0.00570113724
-  173.  0.00570386415
-  173.100006  0.00570496963
-  173.199997  0.00570452726
-  173.300003  0.00570253748
-  173.399994  0.00569899939
-  173.5  0.00569398794
-  173.600006  0.0056874291
-  173.699997  0.00567946956
-  173.800003  0.0056701093
-  173.899994  0.0056594233
-  174.  0.00564733613
-  174.100006  0.00563399633
-  174.199997  0.00561940391
-  174.300003  0.00560355838
-  174.399994  0.00558660692
-  174.5  0.0055685509
-  174.600006  0.00554946251
-  174.699997  0.00552934268
-  174.800003  0.00550826406
-  174.899994  0.00548622804
-  175.  0.00546338083
-  175.100006  0.00543972338
-  175.199997  0.00541532831
-  175.300003  0.00539019704
-  175.399994  0.00536447531
-  175.5  0.00533816451
-  175.600006  0.00531133777
-  175.699997  0.00528399507
-  175.800003  0.00525628403
-  175.899994  0.00522820419
-  176.  0.00519990362
-  176.100006  0.00517130783
-  176.199997  0.00514256489
-  176.300003  0.00511367433
-  176.399994  0.00508478377
-  176.5  0.00505581964
-  176.600006  0.00502692955
-  176.699997  0.0049981866
-  176.800003  0.00496959081
-  176.899994  0.00494129024
-  177.  0.0049132104
-  177.100006  0.00488542579
-  177.199997  0.00485808263
-  177.300003  0.0048311823
-  177.399994  0.00480479794
-  177.5  0.00477892905
-  177.600006  0.00475365017
-  177.699997  0.00472903438
-  177.800003  0.00470508169
-  177.899994  0.00468186615
-  178.  0.00465938775
-  178.100006  0.00463779364
-  178.199997  0.00461701024
-  178.300003  0.00459711114
-  178.399994  0.00457817037
-  178.5  0.00456026103
-  178.600006  0.00454323646
-  178.699997  0.00452731736
-  178.800003  0.00451243017
-  178.899994  0.00449864799
-  179.  0.00448597176
-  179.100006  0.00447440054
-  179.199997  0.00446400885
-  179.300003  0.00445479667
-  179.399994  0.00444683712
-  179.5  0.00443998259
-  179.600006  0.00443445519
-  179.699997  0.00443003327
-  179.800003  0.00442693802
-  179.899994  0.00442509539
+0	1
+2	1
+4	1
+6	1
+8	1
+10	1
+12	1
+14	1
+16	1
+18	1
+20	1
+22	1
+24	1
+26	1
+28	1
+30	1
+32	1
+34	1
+36	1
+38	1
+40	1
+42	1
+44	1
+46	1
+48	1
+50	1
+52	1
+54	1
+56	1
+58	1
+60	1
+62	1
+64	1
+66	1
+68	1
+70	1
+72	1
+74	1
+76	1
+78	1
+80	1
+82	1
+84	1
+86	1
+88	1
+90	1
+92	1
+94	1
+96	1
+98	1
+100	1
+102	1
+104	1
+106	1
+108	1
+110	1
+112	1
+114	1
+116	1
+118	1
+120	1
+122	1
+124	1
+126	1
+128	1
+130	1
+132	1
+134	1
+136	1
+138	1
+140	1
+142	1
+144	1
+146	1
+148	1
+150	1
+152	1
+154	1
+156	1
+158	1
+160	1
+162	1
+164	1
+166	1
+168	1
+170	1
+172	1
+174	1
+176	1
+178	1
+180	1
diff --git a/Inputs/EventGenerator/alpha.source b/Inputs/EventGenerator/alpha.source
index e3e16d1f5..3901aa637 100644
--- a/Inputs/EventGenerator/alpha.source
+++ b/Inputs/EventGenerator/alpha.source
@@ -4,10 +4,10 @@
 %			   Energy are given in MeV , Position in mm				  %	
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
 Isotropic
-	EnergyLow=  0
-	EnergyHigh= 30
-	HalfOpenAngleMin= 0
-	HalfOpenAngleMax= 45
+	EnergyLow= 35 
+	EnergyHigh= 35
+	HalfOpenAngleMin= 90
+	HalfOpenAngleMax= 180
 	x0= 0	
 	y0= 0	
 	z0= 0	
diff --git a/NPAnalysis/Gaspard/RunToTreat.txt b/NPAnalysis/Gaspard/RunToTreat.txt
index e62f63776..3a291143e 100644
--- a/NPAnalysis/Gaspard/RunToTreat.txt
+++ b/NPAnalysis/Gaspard/RunToTreat.txt
@@ -1,6 +1,8 @@
 TTreeName 
 	SimulatedTree
 RootFileName 
-	../../Outputs/Simulation/mySimul_test.root
-%	../../Outputs/Simulation/mySimul.root
+%	../../Outputs/Simulation/mySimul_test.root
 	../../Outputs/Simulation/mySimul.root
+%	../../Outputs/Simulation/TestMarcIsotropic.root
+%	../../Outputs/Simulation/TestMarc132sn.root
+%	../../Outputs/Simulation/TestMarcIsotropic1detector.root
diff --git a/NPAnalysis/Gaspard/src/Analysis.cc b/NPAnalysis/Gaspard/src/Analysis.cc
index 5e17b75f7..5ee4f84ab 100644
--- a/NPAnalysis/Gaspard/src/Analysis.cc
+++ b/NPAnalysis/Gaspard/src/Analysis.cc
@@ -55,7 +55,7 @@ int main(int argc,char** argv)
    cout << "Number of entries to be analysed: " << nentries << endl;
 
    for (int i = 0; i < nentries; i ++) {
-      if (i%10000 == 0 && i!=0) cout << i << " analysed events" << endl;
+      if (i%10000 == 0 && i!=0) cout << "\r" << i << " analysed events" << flush;
       chain -> GetEntry(i);
 
       // Treat Gaspard event
@@ -78,17 +78,21 @@ int main(int argc,char** argv)
          ThetaStrip = ThetaCalculation (A ,TVector3(0,0,1));
 
          // Correct for energy loss in the target
-//         E = DeutonTargetCD2.EvaluateInitialEnergy(E, 4.85*micrometer, ThetaStrip);
+//         E = DeutonTargetCD2.EvaluateInitialEnergy(E, 5.15*micrometer, ThetaStrip);
 
          // Calculate excitation energy
          if (Theta/deg > 90) {
             ExNoStrips = myReaction->ReconstructRelativistic(E, Theta / rad);
             Ex         = myReaction->ReconstructRelativistic(E, ThetaStrip);
          }
-         else Ex = -200;
+         else {
+            Ex         = -200;
+            ExNoStrips = -200;
+         }
       }
       else {
-         Ex = -100;
+         Ex         = -100;
+         ExNoStrips = -100;
       }
 
       EE = E ; TT = ThetaStrip/deg;
diff --git a/NPDocumentation/Gaspard.tex b/NPDocumentation/Gaspard.tex
index 38974666e..1e226e9d3 100755
--- a/NPDocumentation/Gaspard.tex
+++ b/NPDocumentation/Gaspard.tex
@@ -16,12 +16,70 @@
 
 
 \section{Introduction}
+The Gaspard project is developed within the NPTool framework. For the 
+moment only the tracker of charged particles is currently under study.
+Coupling of the tracker with a gamma-ray calorimeter such as AGATA or
+PARIS will be considered in the future. 
+
+NPTool is a modular package allowing to perform Geant4 simulations and to 
+analyse the results of the simulations. It is strongly encouraged to read 
+the general NPTool documentation that you can find in this directory.
+
+
 \section{NPSimulation}
-\subsection{}
-\subsection{Storing the results of the simulation}
+\subsection{Specificity of Gaspard}
+The Gaspard tracker detector, even if it is made of several types of detectors, 
+is considered as {\it one} detector from the NPTool point of view.
+
+\subsection{Running the simulation}
+\subsection{Results of the simulation}
+The results of the simulation are in the ROOT format and the output file 
+is stored in \$NPTool/Output/Simulation. The output ROOT file contains
+three classes:
+\begin{itemize}
+   \item {\it TInitialConditions:}
+   \item {\it TInteractionCoordinates:}
+   \item {\it TGaspardTrackerData:}
+\end{itemize}
+
 \subsection{Adding a new detector shape to Gaspard}
+A special class (GaspardTrackerDummyShape) has been created to show how
+to define a new module for the Gaspard Tracker. This class describes a
+simple 5x5 cm2 square telescope made of three layers of silicon which  
+has been used for some preliminary studies of the tracker. So, when 
+considering adding a new module to the Gaspard Tracker, please do not use
+this class but create you own instead. However, for the explanations the 
+GaspardTrackerDummyShape case will bed considered.
+
+When adding a new detector you need to follow several steps:
+
+\subsubsection{Definition of an index for the detector}
+Since the results of the simulation are stored in an unique data class 
+(GaspardTrackerData) dealing with different module types, it is 
+necessary to give an absolute number to each module. This is managed in
+the GaspardTrackerModule class where there is a map (m\_index) which
+associates a name (the module type identifier) with an integer (the value 
+of the index).
+
+To add a new detector it is just needed to add in the {\it InitializeIndex()}
+method a line such as:
+
+\begin{verbatim}
+   m_index["DummyShape"] = 1000;
+\end{verbatim}
+
+\subsubsection{Definition of the geometry and its readout}
+This is done in two files GaspardTrackerDummyShape.{h,cxx}. The geometry 
+is defined in the {\it VolumeMaker()} method, the placement of the 
+module is defined in the {\it ConstructDetector()} method, the readout
+of the geometry is done in the {\it ReadSensitive()} method and the 
+scorers are declared in the {\it InitializeScorers()} method.
+
+\subsubsection{Definition of the scorers}
+
 
 \section{NPAnalysis}
+To be documented...
 
 \end{document}
 
diff --git a/NPLib/IORoot/RootOutput.cxx b/NPLib/IORoot/RootOutput.cxx
index cd61a5186..625edb299 100644
--- a/NPLib/IORoot/RootOutput.cxx
+++ b/NPLib/IORoot/RootOutput.cxx
@@ -68,6 +68,7 @@ RootOutput::~RootOutput()
 {
    // The data is written to the file and the tree is closed:
    if (pRootFile) {
+      cout << endl;
       cout << "Got histograms and Tree !" << endl;
       pRootFile->Write();
       pRootFile->Close();
diff --git a/NPSimulation/include/GaspardTrackerDummyShape.hh b/NPSimulation/include/GaspardTrackerDummyShape.hh
index 256be83a4..2309fcd57 100644
--- a/NPSimulation/include/GaspardTrackerDummyShape.hh
+++ b/NPSimulation/include/GaspardTrackerDummyShape.hh
@@ -141,6 +141,7 @@ private:
 namespace GPDDUMMYSHAPE
 {
    // Resolution
+//   const G4double ResoFirstStage  = 0;	// = 50 keV of Resolution   //   Unit is MeV/2.35
    const G4double ResoFirstStage  = 0.0213;	// = 50 keV of Resolution   //   Unit is MeV/2.35
    const G4double ResoSecondStage = 0.0213 * sqrt(2);	// = 50 keV of resolution //   Unit is MeV/2.35
    const G4double ResoThirdStage  = 0.0213;	// = 50 keV of resolution //   Unit is MeV/2.35
@@ -158,6 +159,7 @@ namespace GPDDUMMYSHAPE
    // First stage
    const G4double FirstStageFace       = 5.0*cm;
    const G4double FirstStageThickness  = 300*micrometer;
+//   const G4double FirstStageThickness  = 2*mm;
    // for testing the excitation energy reconstruction
 //   const G4double FirstStageThickness  = 1.3*cm;
    const G4int NumberOfStrips	       = 25; // 2mm strip pitch
diff --git a/NPSimulation/src/EventAction.cc b/NPSimulation/src/EventAction.cc
index bba98dd22..c370fd394 100644
--- a/NPSimulation/src/EventAction.cc
+++ b/NPSimulation/src/EventAction.cc
@@ -53,7 +53,8 @@ EventAction::~EventAction()
 void EventAction::BeginOfEventAction(const G4Event* event)
 {
    if ((event->GetEventID() + 1) % m_printModulo == 0)
-      G4cout << "Event: " << event->GetEventID() + 1 << G4endl ;
+//      G4cout << "Event: " << event->GetEventID() + 1 << G4endl;
+      G4cout << "\rEvent: " << event->GetEventID() + 1 << flush;
 }
 
 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
diff --git a/TODO b/TODO
index 3bf175015..6032699be 100644
--- a/TODO
+++ b/TODO
@@ -41,7 +41,6 @@ TODO for NPTool:
 
 TODO for NPAnalysis:
 --------------------
-   + Add comment support for RunToTreat.txt (Adrien)
    + Add calibration manager class from Julien (Adrien)
    + Use only one class for the analysis per detector instead of two currently
      (ROOT feature in private member definition ( //!))
-- 
GitLab