Computing correctly the number of traj left to run to finish phase3

Codes/main.py

@@ -1388,7 +1388,7 @@ if __name__ == '__main__':
                 # to converge. Do the check at the end of run anyway also.
                 if (traj_index >= CONST.N_TRAJ_TO_CHECK_SIS_DEFAULT and traj_index == next_traj_to_check_sis) or traj_index == idx_end_phase3_asked:
                     cut.logger.info(f'Checking SIS on Phase III samples only...')
-                    ACLmax =  cautocorr.get_maximum_integrated_time(np.asarray(sampler.samples))
+                    ACLmax = cautocorr.get_maximum_integrated_time(np.asarray(sampler.samples))
                     n_sis_accumulated = int(len(sampler.samples) / ACLmax)
                     n_sis_to_get = sampler.n_sis - n_sis_accumulated
                     cut.logger.info(f'~{n_sis_accumulated} SIS out of {len(sampler.samples)} samples since ACLmax={ACLmax}.')
@@ -1397,10 +1397,10 @@ if __name__ == '__main__':
                         break_before_enough_sis = False
                         break
                     else:
-                        n_traj_left_to_run_a_priori = sampler.n_sis * ACLmax - traj_index
+                        n_traj_left_to_run_a_priori = sampler.n_sis * ACLmax - len(sampler.samples)
                         n_traj_to_check_sis = min(CONST.N_TRAJ_TO_CHECK_SIS_DEFAULT, n_traj_left_to_run_a_priori)
                         next_traj_to_check_sis = traj_index + n_traj_to_check_sis
-                        cut.logger.info(f' Missing {n_sis_to_get} SIS => continuing phase3 for ~{n_traj_left_to_run_a_priori}. Next check in {n_traj_to_check_sis} traj.')
+                        cut.logger.info(f' Missing {n_sis_to_get} SIS => continuing phase3 for ~{n_traj_left_to_run_a_priori}. Next check in {n_traj_to_check_sis} traj at trajectory #{next_traj_to_check_sis}.')
 
 
                 if traj_index % CONST.N_TRAJ_TO_SAVE_STATE == 0 and traj_index != idx_start_phase3: