convergence_detection.mli 1.15 KB
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open Core
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open Bistro.EDSL
open Bistro.Std
open Bistro_bioinfo.Std
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open File_formats
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open Defs
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type result = [
  | `Pcoc of [`pcoc] directory workflow
  | `Pcoc_gamma of [`pcoc] directory workflow
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  | `Pcoc_C60 of [`pcoc] directory workflow
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  | `Diffsel of [`diffsel] directory workflow
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  | `Diffsel_bis of [`diffsel] directory workflow
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  | `Identical_LG of [`identical] directory workflow
  | `Identical_WAG of [`identical] directory workflow
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  | `Topological_LG of [`topological] directory workflow
  | `Topological_WAG of [`topological] directory workflow
  | `Tdg09 of [`tdg09] directory workflow
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  | `Multinomial of [`multinomial] directory workflow
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]
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val meth_string_of_result : result -> string
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type dataset_res = {
  model_prefix : string ;
  tree_prefix : string ;
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  dataset : Dataset.t ;
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  res_by_tools: result list ;
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  merged_results : text_file workflow ;
  plot_merged_results : svg workflow
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  }

val merge_results :
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  res_by_tools : result list ->
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  text_file workflow
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val plot_merge_results :
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    plot_all_sites: bool ->
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    res_by_tools : result list ->
    tree:nhx workflow ->
    faa:aminoacid_fasta workflow ->
    tsv:text_file workflow ->
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    svg workflow