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Philippe Veber authored
original and optimized versions were run and benchmarked on the following program: ```ocaml let () = let open Codepi.Orthomam in let loggers = [ Bistro_utils.Console_logger.create () ] in let db = Codepitk.Orthomam_db.make "_runs/omm" in let q = search_alignments ~pat:"*GPR87" db |> List.hd |> query ~convergent_species:(Bistro.Workflow.data species_with_echolocation) in inhouse_tdg09 q |> Bistro.Workflow.path |> Bistro_engine.Scheduler.simple_eval_exn ~loggers |> print_endline ``` execution time got from 24min to 18s, apparently with very little changes on pvalue results (after the 6th decimal)
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