Commit 2e60dfa3 authored by LANORE Vincent's avatar LANORE Vincent
Browse files

Updated makefile with Carine's suggestions

parent 8249be36
......@@ -79,11 +79,17 @@ analyses_seuils:
reviewphiltrans validation --outdir outdir_analyses_seuils --tree-dir trees4analyses --profile-fn aa_fitness/263SelectedProfiles.tsv --np 16 --no-ne --no-hapc --ns 1000 && \
mv dag.dot daganalyses_seuils.dot
.PHONY: analyses_everything_fast
analyses_everything:
cd example && \
reviewphiltrans validation --outdir outdir_analyses_everything_fast --tree-dir trees4analyses --profile-fn aa_fitness/263SelectedProfiles.tsv --np 16 --ns 100 --fast && \
mv dag.dot daganalyses_everything_fast.dot
.PHONY: analyses_everything
analyses_everything:
cd example && \
reviewphiltrans validation --outdir outdir_analyses_everything --tree-dir trees4analyses --profile-fn aa_fitness/263SelectedProfiles.tsv --np 16 --ns 100 && \
mv dag.dot daganalyses_263SelectedProfiles_t.dot
mv dag.dot daganalyses_everything.dot
# -----------------------------------------------------------------------
# experiments on Ne values choices
......
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