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VEBER Philippe
codepi
Commits
2e60dfa3
Commit
2e60dfa3
authored
Jul 19, 2018
by
LANORE Vincent
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Updated makefile with Carine's suggestions
parent
8249be36
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Makefile
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2e60dfa3
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@@ -79,11 +79,17 @@ analyses_seuils:
reviewphiltrans validation
--outdir
outdir_analyses_seuils
--tree-dir
trees4analyses
--profile-fn
aa_fitness/263SelectedProfiles.tsv
--np
16
--no-ne
--no-hapc
--ns
1000
&&
\
mv
dag.dot daganalyses_seuils.dot
.PHONY
:
analyses_everything_fast
analyses_everything
:
cd
example
&&
\
reviewphiltrans validation
--outdir
outdir_analyses_everything_fast
--tree-dir
trees4analyses
--profile-fn
aa_fitness/263SelectedProfiles.tsv
--np
16
--ns
100
--fast
&&
\
mv
dag.dot daganalyses_everything_fast.dot
.PHONY
:
analyses_everything
analyses_everything
:
cd
example
&&
\
reviewphiltrans validation
--outdir
outdir_analyses_everything
--tree-dir
trees4analyses
--profile-fn
aa_fitness/263SelectedProfiles.tsv
--np
16
--ns
100
&&
\
mv
dag.dot daganalyses_
263SelectedProfiles_t
.dot
mv
dag.dot daganalyses_
everything
.dot
# -----------------------------------------------------------------------
# experiments on Ne values choices
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