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Commit 3a8f0be2 authored by Louis Duchemin's avatar Louis Duchemin

Setup docker for RER converge

parent f5ba4432
......@@ -2,6 +2,9 @@ open Core_kernel
open Bistro
open Bistro.Shell_dsl
let img =
[ docker_image ~account:"lsdch" ~name:"rerconverge" ~tag:"latest" () ]
let phenotypes_of_convergent_species species_list =
let f =
[%workflow
......@@ -111,6 +114,6 @@ write_tsv({{dest}}, res)
let rer_converge ?max_read ?(transform = `sqrt) ?(weighted = true)
?(scale = true) ?(continuous = false) ~gene_tree_set ~phenotype =
Bistro_utils.R_script.workflow ~descr:"rer_converge"
Bistro_utils.R_script.workflow ~img ~descr:"rer_converge"
(script ?max_read ~transform ~weighted ~scale ~continuous
~gene_tree_set ~phenotype)
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