Commit 4434509f authored by Philippe Veber's avatar Philippe Veber
Browse files

update .ocamlinit

parent d4686c3b
......@@ -4,9 +4,10 @@ open Codepi
let njplot (t : Biotope.Formats.newick Bistro.file) = Sys.command (Printf.sprintf "njplot %s" (path t))
let n_h0 = 50
let n_ha = 50
let n_h0 = 300
let n_ha = 100
let npairs = 10
let tree = Simulation_dataset.Pair_tree { branch_length1 = 3. ; branch_length2 = 3. ; npairs };;
let tree = Simulation_dataset.NHX (Bistro.Workflow.input "data/besnard2009/besnard2009.nhx")
let sim = Simulation_dataset.convdet_simulation ~tree ~profiles:"example/aa_fitness/263SelectedProfiles.tsv" ~n_h0 ~n_ha ();;
let convergent_species = List.init npairs (Printf.sprintf "C%d");;
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