Commit 4ed2be80 authored by Philippe Veber's avatar Philippe Veber
Browse files

Multinomial: minor fix

parent bc73c846
......@@ -37,6 +37,7 @@ module Make(D : Dataset) = struct
Multinomial.multinomial
~tree_sc:(tree d)
~faa:(amino_acid_alignment d)
()
let multinomial_asymptotic_lrt d =
Multinomial.multinomial_asymptotic_lrt
......
......@@ -3,7 +3,7 @@ open Bistro
open Bistro.Shell_dsl
open File_formats
let multinomial ?(descr="") ~(tree_sc:_ file) ~(faa:aminoacid_fasta file) : text file =
let multinomial ?(descr="") ~(tree_sc:_ file) ~(faa:aminoacid_fasta file) () : text file =
let img = Env.env_py in
Workflow.shell ~descr:("calc_multinomial."^descr) [
mkdir_p dest;
......
......@@ -218,7 +218,7 @@ let derive_from_det_meth ~det_meth ~(dataset : Dataset.t) ~preview =
| `Identical_WAG -> `Identical_WAG (Identical.identical ~descr ~faa ~tree_id ~tree_sc ~prot_model:"WAG01" ())
| `Topological_LG -> `Topological_LG (Topological.topological ~descr ~faa ~tree:tree_id ~tree_conv ~prot_model:"LG08" ())
| `Topological_WAG -> `Topological_WAG (Topological.topological ~descr ~faa ~tree:tree_id ~tree_conv ~prot_model:"WAG01" ())
| `Multinomial -> `Multinomial (Multinomial.multinomial ~descr ~faa ~tree_sc)
| `Multinomial -> `Multinomial (Multinomial.multinomial ~descr ~faa ~tree_sc ())
| `Msd e -> `Msd (Msd.msd ~descr ~e ~faa ~tree_sc, e)
......
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