Commit 53634b70 authored by Carine Rey's avatar Carine Rey
Browse files

add remove_saturated_sites=yes

parent acac793d
......@@ -15,6 +15,7 @@ let conf_file_bppml ~tree ~faa ~out ~config =
assign "alphabet" (string "Protein") ;
assign "input.sequence.remove_stop_codons" (string "no") ;
assign "input.sequence.sites_to_use" (string "all") ;
assign "input.sequence.remove_saturated_sites" (string "yes") ;
assign "input.tree.file" (dep tree) ;
assign "init.tree" (string "user") ;
......
......@@ -15,6 +15,8 @@ let conf_file_bppml ~tree ~faa ~out ~config =
assign "alphabet" (string "Protein") ;
assign "input.sequence.remove_stop_codons" (string "no") ;
assign "input.sequence.sites_to_use" (string "all") ;
assign "input.sequence.remove_saturated_sites" (string "yes") ;
assign "input.tree.file" (dep tree) ;
assign "init.tree" (string "user") ;
......
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