Commit 5649b154 authored by Carine Rey's avatar Carine Rey
Browse files

add analyses_night

parent 1983273e
......@@ -77,6 +77,13 @@ analyses_we:
reviewphiltrans validation --outdir outdir_analyses_we --tree-dir trees_analyses_weekend --profile-fn aa_fitness/263SelectedProfiles.tsv --np 28 --ns 1000 && \
mv dag.dot daganalyses_we.dot
.PHONY: analyses_night
analyses_night:
cd example && \
reviewphiltrans validation --outdir outdir_analyses_night --tree-dir trees_analyses_night --profile-fn aa_fitness/263SelectedProfiles.tsv --np 28 --ns 100 --fast && \
reviewphiltrans validation --outdir outdir_analyses_night --tree-dir trees_analyses_night --profile-fn aa_fitness/263SelectedProfiles.tsv --np 28 --ns 100 && \
mv dag.dot daganalyses_we.dot
# -----------------------------------------------------------------------
# Cleaning and formatting
# -----------------------------------------------------------------------
......
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\ No newline at end of file
((((((((((((((((((Ele.bald:0.00905321[&&NHX:Condition=1],Ele.bal2:0.00659531[&&NHX:Condition=1]):0.00089655[&&NHX:Condition=1],Ele.bal4:0.00632936[&&NHX:Condition=1]):0.00126031[&&NHX:Condition=1],(Ele.vivi:0.00814819[&&NHX:Condition=1],Ele.vivA:0.00664821[&&NHX:Condition=1]):0.00306685[&&NHX:Condition=1]):0.0501773[&&NHX:Condition=1:Transition=1],Ele.bal3:0.0147455[&&NHX:Condition=0]):0.00381237[&&NHX:Condition=0],Ele.viv2:0.00910361[&&NHX:Condition=0]):0.027035[&&NHX:Condition=0],Ele.fici:0.0172414[&&NHX:Condition=0]):0.00117769[&&NHX:Condition=0],(Ele.grac:0.00368767[&&NHX:Condition=0],Ele.lim2:0.0061282[&&NHX:Condition=0]):0.0135118[&&NHX:Condition=0]):0.00309275[&&NHX:Condition=0],(Ele.rost:0.0222792[&&NHX:Condition=0],((Ele.limo:0.00402528[&&NHX:Condition=0],Ele.pal2:0.00290412[&&NHX:Condition=0]):0.0111507[&&NHX:Condition=0],(Ele.acut:0.010247[&&NHX:Condition=0],(Ele.palu:0.00611707[&&NHX:Condition=0],(Ele.gra2:0.00366062[&&NHX:Condition=0],Ele.lim3:0.00271569[&&NHX:Condition=0]):0.00091062[&&NHX:Condition=0]):0.00427408[&&NHX:Condition=0]):0.00523724[&&NHX:Condition=0]):0.00863301[&&NHX:Condition=0]):0.00209159[&&NHX:Condition=0]):0.0026909[&&NHX:Condition=0],Ele.geni:0.0271315[&&NHX:Condition=0]):0.0108458[&&NHX:Condition=0],Ele.quan:0.0336688[&&NHX:Condition=0]):0.0328854[&&NHX:Condition=0],((Abildgaar:0.0248854[&&NHX:Condition=0],Bulbostyl:0.103084[&&NHX:Condition=1:Transition=1]):0.0042275[&&NHX:Condition=0],(Actinosch:0.015771[&&NHX:Condition=0],(Fimb.lit:0.0169506[&&NHX:Condition=0],((Fimb.dic:0.0115531[&&NHX:Condition=0],Fimb.fe2:0.00482218[&&NHX:Condition=0]):0.00624077[&&NHX:Condition=0],(Fimb.li2:0.0467089[&&NHX:Condition=1],(Fimb.di2:0.00991581[&&NHX:Condition=1],Fimb.fer:0.00461963[&&NHX:Condition=1]):0.0171063[&&NHX:Condition=1]):0.0660599[&&NHX:Condition=1:Transition=1]):0.002[&&NHX:Condition=0]):0.0346038[&&NHX:Condition=0]):0.0195026[&&NHX:Condition=0]):0.0280312[&&NHX:Condition=0]):0.0102122[&&NHX:Condition=0],(Bolboscho:0.0497423[&&NHX:Condition=0],((Fuir.abn:0.0193997[&&NHX:Condition=0],Fuir.umb:0.0368028[&&NHX:Condition=0]):0.0105857[&&NHX:Condition=0],(((Scho.lac:0.00418219[&&NHX:Condition=0],Scho.val:0.00169024[&&NHX:Condition=0]):0.0435494[&&NHX:Condition=0],Scho.muc:0.0422394[&&NHX:Condition=0]):0.0118163[&&NHX:Condition=0],((((Hellmut1:0.0149483[&&NHX:Condition=0],Isolepis:0.0252833[&&NHX:Condition=0]):0.00924813[&&NHX:Condition=0],Hellmut2:0.0318837[&&NHX:Condition=0]):0.0073057[&&NHX:Condition=0],Scirpoid:0.0294072[&&NHX:Condition=0]):0.00405859[&&NHX:Condition=0],(Cyp.spha:0.0455862[&&NHX:Condition=0],(Cyp.alt3:0.0301854[&&NHX:Condition=0],(Cyp.era6:0.0357718[&&NHX:Condition=0],((Cyp.era1:0.0194858[&&NHX:Condition=0],Cyp.fusc:0.0205919[&&NHX:Condition=0]):0.0118981[&&NHX:Condition=0],(Cyp.pulc:0.0224772[&&NHX:Condition=0],(Cyp.capi:0.0108305[&&NHX:Condition=1],(Volkiell:0.0624907[&&NHX:Condition=1],(Cyp.ust2:0.00743174[&&NHX:Condition=1],(Remirea:0.0131069[&&NHX:Condition=1],(Cyp.iria:0.0117891[&&NHX:Condition=1],((Killinga:0.21717[&&NHX:Condition=1],Pycreus:0.0292249[&&NHX:Condition=1]):0.0432781[&&NHX:Condition=1],((Cyp.long:0.00487414[&&NHX:Condition=1],Cyp.rotu:0.00562598[&&NHX:Condition=1]):0.00991953[&&NHX:Condition=1],(Cyp.papy:0.0131656[&&NHX:Condition=1],Cyp.ustu:0.00876418[&&NHX:Condition=1]):0.00472178[&&NHX:Condition=1]):0.00156304[&&NHX:Condition=1]):0.00486449[&&NHX:Condition=1]):0.0313978[&&NHX:Condition=1]):0.00265947[&&NHX:Condition=1]):0.00524434[&&NHX:Condition=1]):0.00167181[&&NHX:Condition=1]):0.0485602[&&NHX:Condition=1:Transition=1]):0.00407634[&&NHX:Condition=0]):0.00193356[&&NHX:Condition=0]):0.00515327[&&NHX:Condition=0]):0.0054758[&&NHX:Condition=0]):0.0128683[&&NHX:Condition=0]):0.0298749[&&NHX:Condition=0]):0.00487552[&&NHX:Condition=0]):0.00338292[&&NHX:Condition=0]):0.00910152[&&NHX:Condition=0]):0.00485947[&&NHX:Condition=0],(Blysmus:0.0319857[&&NHX:Condition=0],((Eriophor:0.0056163[&&NHX:Condition=0],Scirpus:0.00967332[&&NHX:Condition=0]):0.0143632[&&NHX:Condition=0],(((Schoenox:0.0220682[&&NHX:Condition=0],Uncin.un:0.0180876[&&NHX:Condition=0]):0.0153642[&&NHX:Condition=0],Uncin.ph:0.0251646[&&NHX:Condition=0]):0.0117786[&&NHX:Condition=0],(Carex.com:0.00416034[&&NHX:Condition=0],(Carex.hal:0.0104025[&&NHX:Condition=0],(Carex.ber:5e-08[&&NHX:Condition=0],Carex.pen:0.00363564[&&NHX:Condition=0]):0.00350985[&&NHX:Condition=0]):0.00148563[&&NHX:Condition=0]):0.0202311[&&NHX:Condition=0]):0.0374876[&&NHX:Condition=0]):0.0152941[&&NHX:Condition=0]):0.021877[&&NHX:Condition=0]):0.0058328[&&NHX:Condition=0],((Rhy.alba:0.0263958[&&NHX:Condition=0],Rhy.grac:0.0458535[&&NHX:Condition=0]):0.0212533[&&NHX:Condition=0],(Rhy.albi:0.0111992[&&NHX:Condition=0],(Rhy.rubr:0.00814157[&&NHX:Condition=1],(Rhy.glob:0.03248[&&NHX:Condition=1],Rhy.glo2:0.0190199[&&NHX:Condition=1]):0.0119229[&&NHX:Condition=1]):0.0310831[&&NHX:Condition=1:Transition=1]):0.0594879[&&NHX:Condition=0]):0.0177109[&&NHX:Condition=0]):0.0209885[&&NHX:Condition=0],Carpha:0.0790474[&&NHX:Condition=0]):0.00861785[&&NHX:Condition=0],(Schoenus:0.0647855[&&NHX:Condition=0],(Baumea:0.0182493[&&NHX:Condition=0],Machaeri:0.00572813[&&NHX:Condition=0]):0.0432265[&&NHX:Condition=0]):0.0321506[&&NHX:Condition=0]):0.0161195[&&NHX:Condition=0],Cladium:0.0782346[&&NHX:Condition=0]):0.0137087[&&NHX:Condition=0],(Coleochlo:0.111951[&&NHX:Condition=0],Microdra:0.0574069[&&NHX:Condition=0]):0.0808967[&&NHX:Condition=0],Chrysithr:0.0764912[&&NHX:Condition=0]);
\ No newline at end of file
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