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Commit 6d392a45 authored by Louis Duchemin's avatar Louis Duchemin

RERconverge executable (wip)

parent 88297304
......@@ -15,7 +15,16 @@
(pps ppx_jane)))
(executable
(name lmm_benchmark)
(modules lmm_benchmark)
(libraries codepi)
(preprocess (pps ppx_jane)))
(name lmm_benchmark)
(modules lmm_benchmark)
(libraries codepi)
(preprocess
(pps ppx_jane)))
(executable
(name wip)
(public_name wip)
(modules wip)
(libraries codepi)
(preprocess
(pps ppx_jane)))
let db = Codepitk.Orthomam_db.make "/home/louis/Data/omm/"
let target =
Codepi.Orthomam.rer_converge ~db
~phenotypes:
(Bistro.Workflow.data Codepi.Orthomam.species_with_echolocation)
()
let () =
let loggers = [ Bistro_utils.Console_logger.create () ] in
let allowed_containers = [ `Docker ] in
Bistro.Workflow.path target
|> Bistro_engine.Scheduler.simple_eval_exn ~allowed_containers ~np:4
~mem:(`GB 4) ~loggers
|> print_endline
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