Docker-in-Docker (DinD) capabilities of public runners deactivated. More info

Commit 8ce98c71 authored by Carine Rey's avatar Carine Rey
Browse files

update trees4analyses

parent fe928aab
......@@ -31,11 +31,11 @@ test:
cd example && \
reviewphiltrans pipeline --outdir outdir --tree-dir trees --profile-fn aa_fitness/aafitness1_first_100_freq_ok_bpp.csv --preview --np 4 && \
mv dag.dot dagtest.dot && \
dot -Tsvg dagtest.dot -o dagtest.svg && \
dot -Tsvg dagtest.dot -o dagtest.svg
analyses_test:
cd example && \
reviewphiltrans pipeline --outdir outdir_analyses --tree-dir trees4analyses --profile-fn aa_fitness/aafitness1_first_100_freq_ok_bpp.csv --preview --np 4 && \
reviewphiltrans pipeline --outdir outdir_analyses_test --tree-dir trees4analyses --profile-fn aa_fitness/aafitness1_first_100_freq_ok_bpp.csv --preview --np 4 && \
mv dag.dot daganalyses_test.dot && \
dot -Tpdf daganalyses_test.dot -o daganalyses_test.pdf
......
(ornithorhynchus_anatinus:0.1278[&&NHX:Condition=0],(((sarcophilus_harrisii:0.06813[&&NHX:Condition=0],notamacropus_eugenii:0.07663[&&NHX:Condition=0]):0.00305[&&NHX:Condition=0],monodelphis_domestica:0.07637[&&NHX:Condition=0]):0.04008[&&NHX:Condition=0],(((loxodonta_africana:0.06161[&&NHX:Condition=0],procavia_capensis:0.07695[&&NHX:Condition=0]):0.01578[&&NHX:Condition=0],echinops_telfairi:0.09765[&&NHX:Condition=0]):0.02562[&&NHX:Condition=0],((dasypus_novemcinctus:0.07725[&&NHX:Condition=0],choloepus_hoffmanni:0.0787[&&NHX:Condition=0]):0.02781[&&NHX:Condition=0],(((((oryctolagus_cuniculus:0.07649[&&NHX:Condition=0],ochotona_princeps:0.09226[&&NHX:Condition=0]):0.02465[&&NHX:Condition=0],((((((cavia_aperea:0.01305[&&NHX:Condition=0],cavia_porcellus:0.00765[&&NHX:Condition=0]):0.06702[&&NHX:Condition=0],chinchilla_lanigera:0.06971[&&NHX:Condition=0]):0.00361[&&NHX:Condition=0],octodon_degus:0.07621[&&NHX:Condition=0]):0.00219[&&NHX:Condition=0],((heterocephalus_glaber_female:0.00045[&&NHX:Condition=0],heterocephalus_glaber_male:0.00082[&&NHX:Condition=0]):0.05583[&&NHX:Condition=0],fukomys_damarensis:0.05811[&&NHX:Condition=0]):0.01878[&&NHX:Condition=0]):0.02107[&&NHX:Condition=0],ictidomys_tridecemlineatus:0.08987[&&NHX:Condition=0]):0.00443[&&NHX:Condition=0],(dipodomys_ordii:0.10007[&&NHX:Condition=0],(jaculus_jaculus:0.09418[&&NHX:Condition=0],(nannospalax_galili:0.08691[&&NHX:Condition=0],(((((cricetulus_griseus_chok1gshd:0.00024[&&NHX:Condition=0],cricetulus_griseus_crigri:0.00077[&&NHX:Condition=0]):0.04865[&&NHX:Condition=0],mesocricetus_auratus:0.05241[&&NHX:Condition=0]):0.01641[&&NHX:Condition=0],peromyscus_maniculatus_bairdii:0.06366[&&NHX:Condition=0]):0.00279[&&NHX:Condition=0],microtus_ochrogaster:0.07073[&&NHX:Condition=0]):0.01053[&&NHX:Condition=0],(rattus_norvegicus:0.06307[&&NHX:Condition=0],(mus_pahari:0.03682[&&NHX:Condition=0],(mus_caroli:0.02056[&&NHX:Condition=0],(mus_spretus:0.01046[&&NHX:Condition=0],(mus_musculus_casteij:0.00509[&&NHX:Condition=0],(mus_musculus_pwkphj:0.00538[&&NHX:Condition=0],(mus_musculus_nzohlltj:0.00134[&&NHX:Condition=0],((mus_musculus_c57bl6nj:0.00064[&&NHX:Condition=0],mus_musculus:0.0001[&&NHX:Condition=0]):0.00094[&&NHX:Condition=0],((mus_musculus_lpj:0.00058[&&NHX:Condition=0],mus_musculus_129s1svimj:0.00049[&&NHX:Condition=0]):0.00094[&&NHX:Condition=0],(((((mus_musculus_c3hhej:0.00038[&&NHX:Condition=0],mus_musculus_cbaj:0.00054[&&NHX:Condition=0]):0.00026[&&NHX:Condition=0],mus_musculus_dba2j:0.00112[&&NHX:Condition=0]):0.00027[&&NHX:Condition=0],(mus_musculus_aj:0.00037[&&NHX:Condition=0],mus_musculus_balbcj:0.00091[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0]):0.00028[&&NHX:Condition=0],mus_musculus_akrj:0.00075[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0],(mus_musculus_wsbeij:0.00183[&&NHX:Condition=0],(mus_musculus_nodshiltj:0.00145[&&NHX:Condition=0],mus_musculus_fvbnj:0.00095[&&NHX:Condition=0]):0.00046[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0]):0.00028[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0]):0.00301[&&NHX:Condition=0]):0.00044[&&NHX:Condition=0]):0.00566[&&NHX:Condition=0]):0.01055[&&NHX:Condition=0]):0.01672[&&NHX:Condition=0]):0.02326[&&NHX:Condition=0]):0.01744[&&NHX:Condition=0]):0.01323[&&NHX:Condition=0]):0.00918[&&NHX:Condition=0]):0.00747[&&NHX:Condition=0]):0.00124[&&NHX:Condition=0]):0.00365[&&NHX:Condition=0]):0.00185[&&NHX:Condition=0],tupaia_belangeri:0.09888[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0],(((propithecus_coquereli:0.0424[&&NHX:Condition=0],microcebus_murinus:0.0412[&&NHX:Condition=0]):0.02776[&&NHX:Condition=0],otolemur_garnettii:0.07575[&&NHX:Condition=0]):0.0073[&&NHX:Condition=0],(carlito_syrichta:0.0799[&&NHX:Condition=0],((((saimiri_boliviensis_boliviensis:0.02639[&&NHX:Condition=0],cebus_capucinus:0.02594[&&NHX:Condition=0]):0.00278[&&NHX:Condition=0],callithrix_jacchus:0.03[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0],aotus_nancymaae:0.02501[&&NHX:Condition=0]):0.02357[&&NHX:Condition=0],((((((pan_paniscus:0.00307[&&NHX:Condition=0],pan_troglodytes:0.00247[&&NHX:Condition=0]):0.0043[&&NHX:Condition=0],homo_sapiens:0.00661[&&NHX:Condition=0]):0.00176[&&NHX:Condition=0],gorilla_gorilla:0.00868[&&NHX:Condition=0]):0.00836[&&NHX:Condition=0],pongo_abelii:0.01726[&&NHX:Condition=0]):0.00283[&&NHX:Condition=0],nomascus_leucogenys:0.01961[&&NHX:Condition=0]):0.01078[&&NHX:Condition=0],(((rhinopithecus_roxellana:0.0021[&&NHX:Condition=0],rhinopithecus_bieti:0.00301[&&NHX:Condition=0]):0.00939[&&NHX:Condition=0],colobus_angolensis_palliatus:0.01232[&&NHX:Condition=0]):0.00505[&&NHX:Condition=0],(chlorocebus_sabaeus:0.0117[&&NHX:Condition=0],(((mandrillus_leucophaeus:0.00665[&&NHX:Condition=0],cercocebus_atys:0.0058[&&NHX:Condition=0]):0.00064[&&NHX:Condition=0],papio_anubis:0.00666[&&NHX:Condition=0]):0.0012[&&NHX:Condition=0],((macaca_mulatta:0.00233[&&NHX:Condition=0],macaca_fascicularis:0.00215[&&NHX:Condition=0]):0.00095[&&NHX:Condition=0],macaca_nemestrina:0.00418[&&NHX:Condition=0]):0.00433[&&NHX:Condition=0]):0.00401[&&NHX:Condition=0]):0.00475[&&NHX:Condition=0]):0.01388[&&NHX:Condition=0]):0.0176[&&NHX:Condition=0]):0.02753[&&NHX:Condition=0]):0.00099[&&NHX:Condition=0]):0.01976[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0],((erinaceus_europaeus:0.10146[&&NHX:Condition=0],sorex_araneus:0.10725[&&NHX:Condition=0]):0.004[&&NHX:Condition=0],((((tursiops_truncatus:0.06798[&&NHX:Condition=1:Transition=1],(((capra_hircus:0.01127[&&NHX:Condition=0],ovis_aries:0.01107[&&NHX:Condition=0]):0.01687[&&NHX:Condition=0],bos_taurus:0.02703[&&NHX:Condition=0]):0.05573[&&NHX:Condition=0],(vicugna_pacos:0.08218[&&NHX:Condition=0],sus_scrofa:0.07611[&&NHX:Condition=0]):0.00086[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0]):0.01334[&&NHX:Condition=0],equus_caballus:0.0817[&&NHX:Condition=0]):0.0044[&&NHX:Condition=0],(pteropus_vampyrus:0.07973[&&NHX:Condition=0],myotis_lucifugus:0.08293[&&NHX:Condition=1:Transition=1]):0.00724[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0],(felis_catus:0.06559[&&NHX:Condition=0],((mustela_putorius_furo:0.05565[&&NHX:Condition=0],ailuropoda_melanoleuca:0.0549[&&NHX:Condition=0]):0.00652[&&NHX:Condition=0],canis_familiaris:0.05998[&&NHX:Condition=0]):0.00575[&&NHX:Condition=0]):0.01641[&&NHX:Condition=0]):0.01276[&&NHX:Condition=0]):0.00018[&&NHX:Condition=0]):0.0001[&&NHX:Condition=0]):0.00274[&&NHX:Condition=0]):0.01154[&&NHX:Condition=0]):0.00682[&&NHX:Condition=0]);
\ No newline at end of file
(ornithorhynchus_anatinus:0.1278[&&NHX:ND=0:Transition=1:Condition=1],(((sarcophilus_harrisii:0.06813[&&NHX:ND=1:Condition=0],notamacropus_eugenii:0.07663[&&NHX:ND=2:Condition=0]):0.00305[&&NHX:ND=3:Condition=0],monodelphis_domestica:0.07637[&&NHX:ND=4:Condition=0]):0.04008[&&NHX:ND=5:Condition=0],(((loxodonta_africana:0.06161[&&NHX:ND=6:Condition=0],procavia_capensis:0.07695[&&NHX:ND=7:Condition=0]):0.01578[&&NHX:ND=8:Condition=0],echinops_telfairi:0.09765[&&NHX:ND=9:Condition=0]):0.02562[&&NHX:ND=10:Condition=0],((dasypus_novemcinctus:0.07725[&&NHX:ND=11:Condition=0],choloepus_hoffmanni:0.0787[&&NHX:ND=12:Condition=0]):0.02781[&&NHX:ND=13:Condition=0],(((((oryctolagus_cuniculus:0.07649[&&NHX:ND=14:Condition=0],ochotona_princeps:0.09226[&&NHX:ND=15:Condition=0]):0.02465[&&NHX:ND=16:Condition=0],((((((cavia_aperea:0.01305[&&NHX:ND=17:Condition=0],cavia_porcellus:0.00765[&&NHX:ND=18:Condition=0]):0.06702[&&NHX:ND=19:Condition=0],chinchilla_lanigera:0.06971[&&NHX:ND=20:Condition=0]):0.00361[&&NHX:ND=21:Condition=0],octodon_degus:0.07621[&&NHX:ND=22:Condition=0]):0.00219[&&NHX:ND=23:Condition=0],((heterocephalus_glaber_female:0.00045[&&NHX:ND=24:Transition=1:Condition=1],heterocephalus_glaber_male:0.00082[&&NHX:ND=25:Condition=0]):0.05583[&&NHX:ND=26:Condition=0],fukomys_damarensis:0.05811[&&NHX:ND=27:Condition=0]):0.01878[&&NHX:ND=28:Condition=0]):0.02107[&&NHX:ND=29:Condition=0],ictidomys_tridecemlineatus:0.08987[&&NHX:ND=30:Condition=0]):0.00443[&&NHX:ND=31:Condition=0],(dipodomys_ordii:0.10007[&&NHX:ND=32:Condition=0],(jaculus_jaculus:0.09418[&&NHX:ND=33:Condition=0],(nannospalax_galili:0.08691[&&NHX:ND=34:Condition=0],(((((cricetulus_griseus_chok1gshd:0.00024[&&NHX:ND=35:Condition=0],cricetulus_griseus_crigri:0.00077[&&NHX:ND=36:Condition=0]):0.04865[&&NHX:ND=37:Condition=0],mesocricetus_auratus:0.05241[&&NHX:ND=38:Condition=0]):0.01641[&&NHX:ND=39:Condition=0],peromyscus_maniculatus_bairdii:0.06366[&&NHX:ND=40:Condition=0]):0.00279[&&NHX:ND=41:Condition=0],microtus_ochrogaster:0.07073[&&NHX:ND=42:Condition=0]):0.01053[&&NHX:ND=43:Condition=0],(rattus_norvegicus:0.06307[&&NHX:ND=44:Condition=0],(mus_pahari:0.03682[&&NHX:ND=45:Condition=0],(mus_caroli:0.02056[&&NHX:ND=46:Condition=0],(mus_spretus:0.01046[&&NHX:ND=47:Condition=0],(mus_musculus_casteij:0.00509[&&NHX:ND=48:Condition=1],(mus_musculus_pwkphj:0.00538[&&NHX:ND=49:Condition=1],(mus_musculus_nzohlltj:0.00134[&&NHX:ND=50:Condition=1],((mus_musculus_c57bl6nj:0.00064[&&NHX:ND=51:Condition=1],mus_musculus:0.0001[&&NHX:ND=52:Condition=1]):0.00094[&&NHX:ND=53:Condition=1],((mus_musculus_lpj:0.00058[&&NHX:ND=54:Condition=1],mus_musculus_129s1svimj:0.00049[&&NHX:ND=55:Condition=1]):0.00094[&&NHX:ND=56:Condition=1],(((((mus_musculus_c3hhej:0.00038[&&NHX:ND=57:Condition=1],mus_musculus_cbaj:0.00054[&&NHX:ND=58:Condition=1]):0.00026[&&NHX:ND=59:Condition=1],mus_musculus_dba2j:0.00112[&&NHX:ND=60:Condition=1]):0.00027[&&NHX:ND=61:Condition=1],(mus_musculus_aj:0.00037[&&NHX:ND=62:Condition=1],mus_musculus_balbcj:0.00091[&&NHX:ND=63:Condition=1]):0.0001[&&NHX:ND=64:Condition=1]):0.00028[&&NHX:ND=65:Condition=1],mus_musculus_akrj:0.00075[&&NHX:ND=66:Condition=1]):0.0001[&&NHX:ND=67:Condition=1],(mus_musculus_wsbeij:0.00183[&&NHX:ND=68:Condition=1],(mus_musculus_nodshiltj:0.00145[&&NHX:ND=69:Condition=1],mus_musculus_fvbnj:0.00095[&&NHX:ND=70:Condition=1]):0.00046[&&NHX:ND=71:Condition=1]):0.0001[&&NHX:ND=72:Condition=1]):0.0001[&&NHX:ND=73:Condition=1]):0.00028[&&NHX:ND=74:Condition=1]):0.0001[&&NHX:ND=75:Condition=1]):0.00301[&&NHX:ND=76:Condition=1]):0.00044[&&NHX:ND=77:Condition=1]):0.00566[&&NHX:ND=78:Transition=1:Condition=1]):0.01055[&&NHX:ND=79:Condition=0]):0.01672[&&NHX:ND=80:Condition=0]):0.02326[&&NHX:ND=81:Condition=0]):0.01744[&&NHX:ND=82:Condition=0]):0.01323[&&NHX:ND=83:Condition=0]):0.00918[&&NHX:ND=84:Condition=0]):0.00747[&&NHX:ND=85:Condition=0]):0.00124[&&NHX:ND=86:Condition=0]):0.00365[&&NHX:ND=87:Condition=0]):0.00185[&&NHX:ND=88:Condition=0],tupaia_belangeri:0.09888[&&NHX:ND=89:Condition=0]):0.0001[&&NHX:ND=90:Condition=0],(((propithecus_coquereli:0.0424[&&NHX:ND=91:Condition=0],microcebus_murinus:0.0412[&&NHX:ND=92:Condition=0]):0.02776[&&NHX:ND=93:Condition=0],otolemur_garnettii:0.07575[&&NHX:ND=94:Condition=0]):0.0073[&&NHX:ND=95:Condition=0],(carlito_syrichta:0.0799[&&NHX:ND=96:Condition=0],((((saimiri_boliviensis_boliviensis:0.02639[&&NHX:ND=97:Condition=0],cebus_capucinus:0.02594[&&NHX:ND=98:Condition=0]):0.00278[&&NHX:ND=99:Condition=0],callithrix_jacchus:0.03[&&NHX:ND=100:Condition=0]):0.0001[&&NHX:ND=101:Condition=0],aotus_nancymaae:0.02501[&&NHX:ND=102:Condition=0]):0.02357[&&NHX:ND=103:Condition=0],((((((pan_paniscus:0.00307[&&NHX:ND=104:Condition=0],pan_troglodytes:0.00247[&&NHX:ND=105:Condition=0]):0.0043[&&NHX:ND=106:Condition=0],homo_sapiens:0.00661[&&NHX:ND=107:Condition=0]):0.00176[&&NHX:ND=108:Condition=0],gorilla_gorilla:0.00868[&&NHX:ND=109:Condition=0]):0.00836[&&NHX:ND=110:Condition=0],pongo_abelii:0.01726[&&NHX:ND=111:Condition=0]):0.00283[&&NHX:ND=112:Condition=0],nomascus_leucogenys:0.01961[&&NHX:ND=113:Condition=0]):0.01078[&&NHX:ND=114:Condition=0],(((rhinopithecus_roxellana:0.0021[&&NHX:ND=115:Condition=0],rhinopithecus_bieti:0.00301[&&NHX:ND=116:Condition=0]):0.00939[&&NHX:ND=117:Condition=0],colobus_angolensis_palliatus:0.01232[&&NHX:ND=118:Condition=0]):0.00505[&&NHX:ND=119:Condition=0],(chlorocebus_sabaeus:0.0117[&&NHX:ND=120:Condition=0],(((mandrillus_leucophaeus:0.00665[&&NHX:ND=121:Condition=0],cercocebus_atys:0.0058[&&NHX:ND=122:Condition=0]):0.00064[&&NHX:ND=123:Condition=0],papio_anubis:0.00666[&&NHX:ND=124:Condition=0]):0.0012[&&NHX:ND=125:Condition=0],((macaca_mulatta:0.00233[&&NHX:ND=126:Condition=1],macaca_fascicularis:0.00215[&&NHX:ND=127:Condition=1]):0.00095[&&NHX:ND=128:Transition=1:Condition=1],macaca_nemestrina:0.00418[&&NHX:ND=129:Condition=0]):0.00433[&&NHX:ND=130:Condition=0]):0.00401[&&NHX:ND=131:Condition=0]):0.00475[&&NHX:ND=132:Condition=0]):0.01388[&&NHX:ND=133:Condition=0]):0.0176[&&NHX:ND=134:Condition=0]):0.02753[&&NHX:ND=135:Condition=0]):0.00099[&&NHX:ND=136:Condition=0]):0.01976[&&NHX:ND=137:Condition=0]):0.0001[&&NHX:ND=138:Condition=0],((erinaceus_europaeus:0.10146[&&NHX:ND=139:Condition=0],sorex_araneus:0.10725[&&NHX:ND=140:Condition=0]):0.004[&&NHX:ND=141:Condition=0],((((tursiops_truncatus:0.06798[&&NHX:ND=142:Condition=1],(((capra_hircus:0.01127[&&NHX:ND=143:Condition=1],ovis_aries:0.01107[&&NHX:ND=144:Condition=1]):0.01687[&&NHX:ND=145:Condition=1],bos_taurus:0.02703[&&NHX:ND=146:Condition=1]):0.05573[&&NHX:ND=147:Condition=1],(vicugna_pacos:0.08218[&&NHX:ND=148:Condition=1],sus_scrofa:0.07611[&&NHX:ND=149:Condition=1]):0.00086[&&NHX:ND=150:Condition=1]):0.0001[&&NHX:ND=151:Condition=1]):0.01334[&&NHX:ND=152:Transition=1:Condition=1],equus_caballus:0.0817[&&NHX:ND=153:Condition=0]):0.0044[&&NHX:ND=154:Condition=0],(pteropus_vampyrus:0.07973[&&NHX:ND=155:Condition=0],myotis_lucifugus:0.08293[&&NHX:ND=156:Condition=0]):0.00724[&&NHX:ND=157:Condition=0]):0.0001[&&NHX:ND=158:Condition=0],(felis_catus:0.06559[&&NHX:ND=159:Condition=0],((mustela_putorius_furo:0.05565[&&NHX:ND=160:Condition=0],ailuropoda_melanoleuca:0.0549[&&NHX:ND=161:Condition=0]):0.00652[&&NHX:ND=162:Condition=0],canis_familiaris:0.05998[&&NHX:ND=163:Condition=0]):0.00575[&&NHX:ND=164:Condition=0]):0.01641[&&NHX:ND=165:Condition=0]):0.01276[&&NHX:ND=166:Condition=0]):0.00018[&&NHX:ND=167:Condition=0]):0.0001[&&NHX:ND=168:Condition=0]):0.00274[&&NHX:ND=169:Condition=0]):0.01154[&&NHX:ND=170:Condition=0]):0.00682[&&NHX:ND=171:Condition=0]):0[&&NHX:ND=172:Condition=0];
(ornithorhynchus_anatinus:0.1278[&&NHX:ND=0:Condition=0],(((sarcophilus_harrisii:0.06813[&&NHX:ND=1:Condition=0],notamacropus_eugenii:0.07663[&&NHX:ND=2:Condition=0]):0.00305[&&NHX:ND=3:Condition=0],monodelphis_domestica:0.07637[&&NHX:ND=4:Condition=0]):0.04008[&&NHX:ND=5:Condition=0],(((loxodonta_africana:0.06161[&&NHX:ND=6:Condition=1],procavia_capensis:0.07695[&&NHX:ND=7:Condition=1]):0.01578[&&NHX:ND=8:Transition=1:Condition=1],echinops_telfairi:0.09765[&&NHX:ND=9:Condition=0]):0.02562[&&NHX:ND=10:Condition=0],((dasypus_novemcinctus:0.07725[&&NHX:ND=11:Condition=0],choloepus_hoffmanni:0.0787[&&NHX:ND=12:Condition=0]):0.02781[&&NHX:ND=13:Condition=0],(((((oryctolagus_cuniculus:0.07649[&&NHX:ND=14:Condition=0],ochotona_princeps:0.09226[&&NHX:ND=15:Condition=0]):0.02465[&&NHX:ND=16:Condition=0],((((((cavia_aperea:0.01305[&&NHX:ND=17:Condition=1],cavia_porcellus:0.00765[&&NHX:ND=18:Condition=1]):0.06702[&&NHX:ND=19:Condition=1],chinchilla_lanigera:0.06971[&&NHX:ND=20:Condition=1]):0.00361[&&NHX:ND=21:Transition=1:Condition=1],octodon_degus:0.07621[&&NHX:ND=22:Condition=0]):0.00219[&&NHX:ND=23:Condition=0],((heterocephalus_glaber_female:0.00045[&&NHX:ND=24:Condition=0],heterocephalus_glaber_male:0.00082[&&NHX:ND=25:Condition=0]):0.05583[&&NHX:ND=26:Condition=0],fukomys_damarensis:0.05811[&&NHX:ND=27:Condition=0]):0.01878[&&NHX:ND=28:Condition=0]):0.02107[&&NHX:ND=29:Condition=0],ictidomys_tridecemlineatus:0.08987[&&NHX:ND=30:Condition=0]):0.00443[&&NHX:ND=31:Condition=0],(dipodomys_ordii:0.10007[&&NHX:ND=32:Condition=0],(jaculus_jaculus:0.09418[&&NHX:ND=33:Condition=0],(nannospalax_galili:0.08691[&&NHX:ND=34:Condition=0],(((((cricetulus_griseus_chok1gshd:0.00024[&&NHX:ND=35:Condition=0],cricetulus_griseus_crigri:0.00077[&&NHX:ND=36:Condition=0]):0.04865[&&NHX:ND=37:Condition=0],mesocricetus_auratus:0.05241[&&NHX:ND=38:Condition=0]):0.01641[&&NHX:ND=39:Condition=0],peromyscus_maniculatus_bairdii:0.06366[&&NHX:ND=40:Condition=0]):0.00279[&&NHX:ND=41:Condition=0],microtus_ochrogaster:0.07073[&&NHX:ND=42:Condition=0]):0.01053[&&NHX:ND=43:Condition=0],(rattus_norvegicus:0.06307[&&NHX:ND=44:Condition=0],(mus_pahari:0.03682[&&NHX:ND=45:Condition=0],(mus_caroli:0.02056[&&NHX:ND=46:Condition=0],(mus_spretus:0.01046[&&NHX:ND=47:Condition=0],(mus_musculus_casteij:0.00509[&&NHX:ND=48:Condition=0],(mus_musculus_pwkphj:0.00538[&&NHX:ND=49:Condition=0],(mus_musculus_nzohlltj:0.00134[&&NHX:ND=50:Condition=0],((mus_musculus_c57bl6nj:0.00064[&&NHX:ND=51:Condition=0],mus_musculus:0.0001[&&NHX:ND=52:Condition=0]):0.00094[&&NHX:ND=53:Condition=0],((mus_musculus_lpj:0.00058[&&NHX:ND=54:Condition=0],mus_musculus_129s1svimj:0.00049[&&NHX:ND=55:Condition=0]):0.00094[&&NHX:ND=56:Condition=0],(((((mus_musculus_c3hhej:0.00038[&&NHX:ND=57:Condition=0],mus_musculus_cbaj:0.00054[&&NHX:ND=58:Condition=0]):0.00026[&&NHX:ND=59:Condition=0],mus_musculus_dba2j:0.00112[&&NHX:ND=60:Condition=0]):0.00027[&&NHX:ND=61:Condition=0],(mus_musculus_aj:0.00037[&&NHX:ND=62:Condition=0],mus_musculus_balbcj:0.00091[&&NHX:ND=63:Condition=0]):0.0001[&&NHX:ND=64:Condition=0]):0.00028[&&NHX:ND=65:Condition=0],mus_musculus_akrj:0.00075[&&NHX:ND=66:Condition=0]):0.0001[&&NHX:ND=67:Condition=0],(mus_musculus_wsbeij:0.00183[&&NHX:ND=68:Condition=0],(mus_musculus_nodshiltj:0.00145[&&NHX:ND=69:Condition=0],mus_musculus_fvbnj:0.00095[&&NHX:ND=70:Condition=0]):0.00046[&&NHX:ND=71:Condition=0]):0.0001[&&NHX:ND=72:Condition=0]):0.0001[&&NHX:ND=73:Condition=0]):0.00028[&&NHX:ND=74:Condition=0]):0.0001[&&NHX:ND=75:Condition=0]):0.00301[&&NHX:ND=76:Condition=0]):0.00044[&&NHX:ND=77:Condition=0]):0.00566[&&NHX:ND=78:Condition=0]):0.01055[&&NHX:ND=79:Condition=0]):0.01672[&&NHX:ND=80:Condition=0]):0.02326[&&NHX:ND=81:Condition=0]):0.01744[&&NHX:ND=82:Condition=0]):0.01323[&&NHX:ND=83:Condition=0]):0.00918[&&NHX:ND=84:Condition=0]):0.00747[&&NHX:ND=85:Condition=0]):0.00124[&&NHX:ND=86:Condition=0]):0.00365[&&NHX:ND=87:Condition=0]):0.00185[&&NHX:ND=88:Condition=0],tupaia_belangeri:0.09888[&&NHX:ND=89:Condition=0]):0.0001[&&NHX:ND=90:Condition=0],(((propithecus_coquereli:0.0424[&&NHX:ND=91:Condition=1],microcebus_murinus:0.0412[&&NHX:ND=92:Condition=1]):0.02776[&&NHX:ND=93:Condition=1],otolemur_garnettii:0.07575[&&NHX:ND=94:Condition=1]):0.0073[&&NHX:ND=95:Transition=1:Condition=1],(carlito_syrichta:0.0799[&&NHX:ND=96:Condition=0],((((saimiri_boliviensis_boliviensis:0.02639[&&NHX:ND=97:Condition=0],cebus_capucinus:0.02594[&&NHX:ND=98:Condition=0]):0.00278[&&NHX:ND=99:Condition=0],callithrix_jacchus:0.03[&&NHX:ND=100:Condition=0]):0.0001[&&NHX:ND=101:Condition=0],aotus_nancymaae:0.02501[&&NHX:ND=102:Condition=0]):0.02357[&&NHX:ND=103:Condition=0],((((((pan_paniscus:0.00307[&&NHX:ND=104:Transition=1:Condition=1],pan_troglodytes:0.00247[&&NHX:ND=105:Condition=0]):0.0043[&&NHX:ND=106:Condition=0],homo_sapiens:0.00661[&&NHX:ND=107:Condition=0]):0.00176[&&NHX:ND=108:Condition=0],gorilla_gorilla:0.00868[&&NHX:ND=109:Transition=1:Condition=1]):0.00836[&&NHX:ND=110:Condition=0],pongo_abelii:0.01726[&&NHX:ND=111:Condition=0]):0.00283[&&NHX:ND=112:Condition=0],nomascus_leucogenys:0.01961[&&NHX:ND=113:Condition=0]):0.01078[&&NHX:ND=114:Condition=0],(((rhinopithecus_roxellana:0.0021[&&NHX:ND=115:Condition=0],rhinopithecus_bieti:0.00301[&&NHX:ND=116:Condition=0]):0.00939[&&NHX:ND=117:Condition=0],colobus_angolensis_palliatus:0.01232[&&NHX:ND=118:Condition=0]):0.00505[&&NHX:ND=119:Condition=0],(chlorocebus_sabaeus:0.0117[&&NHX:ND=120:Condition=0],(((mandrillus_leucophaeus:0.00665[&&NHX:ND=121:Condition=0],cercocebus_atys:0.0058[&&NHX:ND=122:Condition=0]):0.00064[&&NHX:ND=123:Condition=0],papio_anubis:0.00666[&&NHX:ND=124:Condition=0]):0.0012[&&NHX:ND=125:Condition=0],((macaca_mulatta:0.00233[&&NHX:ND=126:Condition=0],macaca_fascicularis:0.00215[&&NHX:ND=127:Condition=0]):0.00095[&&NHX:ND=128:Condition=0],macaca_nemestrina:0.00418[&&NHX:ND=129:Condition=0]):0.00433[&&NHX:ND=130:Condition=0]):0.00401[&&NHX:ND=131:Condition=0]):0.00475[&&NHX:ND=132:Condition=0]):0.01388[&&NHX:ND=133:Condition=0]):0.0176[&&NHX:ND=134:Condition=0]):0.02753[&&NHX:ND=135:Condition=0]):0.00099[&&NHX:ND=136:Condition=0]):0.01976[&&NHX:ND=137:Condition=0]):0.0001[&&NHX:ND=138:Condition=0],((erinaceus_europaeus:0.10146[&&NHX:ND=139:Condition=0],sorex_araneus:0.10725[&&NHX:ND=140:Condition=0]):0.004[&&NHX:ND=141:Condition=0],((((tursiops_truncatus:0.06798[&&NHX:ND=142:Condition=0],(((capra_hircus:0.01127[&&NHX:ND=143:Condition=0],ovis_aries:0.01107[&&NHX:ND=144:Condition=0]):0.01687[&&NHX:ND=145:Condition=0],bos_taurus:0.02703[&&NHX:ND=146:Condition=0]):0.05573[&&NHX:ND=147:Condition=0],(vicugna_pacos:0.08218[&&NHX:ND=148:Condition=0],sus_scrofa:0.07611[&&NHX:ND=149:Condition=0]):0.00086[&&NHX:ND=150:Condition=0]):0.0001[&&NHX:ND=151:Condition=0]):0.01334[&&NHX:ND=152:Condition=0],equus_caballus:0.0817[&&NHX:ND=153:Condition=0]):0.0044[&&NHX:ND=154:Condition=0],(pteropus_vampyrus:0.07973[&&NHX:ND=155:Condition=0],myotis_lucifugus:0.08293[&&NHX:ND=156:Condition=0]):0.00724[&&NHX:ND=157:Condition=0]):0.0001[&&NHX:ND=158:Condition=0],(felis_catus:0.06559[&&NHX:ND=159:Condition=0],((mustela_putorius_furo:0.05565[&&NHX:ND=160:Condition=0],ailuropoda_melanoleuca:0.0549[&&NHX:ND=161:Condition=0]):0.00652[&&NHX:ND=162:Condition=0],canis_familiaris:0.05998[&&NHX:ND=163:Condition=0]):0.00575[&&NHX:ND=164:Condition=0]):0.01641[&&NHX:ND=165:Condition=0]):0.01276[&&NHX:ND=166:Condition=0]):0.00018[&&NHX:ND=167:Condition=0]):0.0001[&&NHX:ND=168:Condition=0]):0.00274[&&NHX:ND=169:Condition=0]):0.01154[&&NHX:ND=170:Condition=0]):0.00682[&&NHX:ND=171:Condition=0]):0[&&NHX:ND=172:Condition=0];
(ornithorhynchus_anatinus:0.1278[&&NHX:ND=0:Condition=0],(((sarcophilus_harrisii:0.06813[&&NHX:ND=1:Condition=0],notamacropus_eugenii:0.07663[&&NHX:ND=2:Condition=0]):0.00305[&&NHX:ND=3:Condition=0],monodelphis_domestica:0.07637[&&NHX:ND=4:Condition=0]):0.04008[&&NHX:ND=5:Condition=0],(((loxodonta_africana:0.06161[&&NHX:ND=6:Condition=0],procavia_capensis:0.07695[&&NHX:ND=7:Condition=0]):0.01578[&&NHX:ND=8:Condition=0],echinops_telfairi:0.09765[&&NHX:ND=9:Condition=0]):0.02562[&&NHX:ND=10:Condition=0],((dasypus_novemcinctus:0.07725[&&NHX:ND=11:Condition=0],choloepus_hoffmanni:0.0787[&&NHX:ND=12:Condition=0]):0.02781[&&NHX:ND=13:Condition=0],(((((oryctolagus_cuniculus:0.07649[&&NHX:ND=14:Condition=0],ochotona_princeps:0.09226[&&NHX:ND=15:Condition=0]):0.02465[&&NHX:ND=16:Condition=0],((((((cavia_aperea:0.01305[&&NHX:ND=17:Condition=1],cavia_porcellus:0.00765[&&NHX:ND=18:Condition=1]):0.06702[&&NHX:ND=19:Condition=1],chinchilla_lanigera:0.06971[&&NHX:ND=20:Condition=1]):0.00361[&&NHX:ND=21:Condition=1],octodon_degus:0.07621[&&NHX:ND=22:Condition=1]):0.00219[&&NHX:ND=23:Condition=1],((heterocephalus_glaber_female:0.00045[&&NHX:ND=24:Condition=1],heterocephalus_glaber_male:0.00082[&&NHX:ND=25:Condition=1]):0.05583[&&NHX:ND=26:Condition=1],fukomys_damarensis:0.05811[&&NHX:ND=27:Condition=1]):0.01878[&&NHX:ND=28:Condition=1]):0.02107[&&NHX:ND=29:Condition=1],ictidomys_tridecemlineatus:0.08987[&&NHX:ND=30:Condition=1]):0.00443[&&NHX:ND=31:Transition=1:Condition=1],(dipodomys_ordii:0.10007[&&NHX:ND=32:Condition=0],(jaculus_jaculus:0.09418[&&NHX:ND=33:Condition=0],(nannospalax_galili:0.08691[&&NHX:ND=34:Condition=0],(((((cricetulus_griseus_chok1gshd:0.00024[&&NHX:ND=35:Condition=0],cricetulus_griseus_crigri:0.00077[&&NHX:ND=36:Condition=0]):0.04865[&&NHX:ND=37:Condition=0],mesocricetus_auratus:0.05241[&&NHX:ND=38:Condition=0]):0.01641[&&NHX:ND=39:Condition=0],peromyscus_maniculatus_bairdii:0.06366[&&NHX:ND=40:Condition=0]):0.00279[&&NHX:ND=41:Condition=0],microtus_ochrogaster:0.07073[&&NHX:ND=42:Condition=0]):0.01053[&&NHX:ND=43:Condition=0],(rattus_norvegicus:0.06307[&&NHX:ND=44:Condition=0],(mus_pahari:0.03682[&&NHX:ND=45:Condition=0],(mus_caroli:0.02056[&&NHX:ND=46:Condition=0],(mus_spretus:0.01046[&&NHX:ND=47:Condition=0],(mus_musculus_casteij:0.00509[&&NHX:ND=48:Condition=0],(mus_musculus_pwkphj:0.00538[&&NHX:ND=49:Condition=0],(mus_musculus_nzohlltj:0.00134[&&NHX:ND=50:Condition=0],((mus_musculus_c57bl6nj:0.00064[&&NHX:ND=51:Condition=0],mus_musculus:0.0001[&&NHX:ND=52:Condition=0]):0.00094[&&NHX:ND=53:Condition=0],((mus_musculus_lpj:0.00058[&&NHX:ND=54:Condition=0],mus_musculus_129s1svimj:0.00049[&&NHX:ND=55:Condition=0]):0.00094[&&NHX:ND=56:Condition=0],(((((mus_musculus_c3hhej:0.00038[&&NHX:ND=57:Condition=0],mus_musculus_cbaj:0.00054[&&NHX:ND=58:Condition=0]):0.00026[&&NHX:ND=59:Condition=0],mus_musculus_dba2j:0.00112[&&NHX:ND=60:Condition=0]):0.00027[&&NHX:ND=61:Condition=0],(mus_musculus_aj:0.00037[&&NHX:ND=62:Condition=0],mus_musculus_balbcj:0.00091[&&NHX:ND=63:Condition=0]):0.0001[&&NHX:ND=64:Condition=0]):0.00028[&&NHX:ND=65:Condition=0],mus_musculus_akrj:0.00075[&&NHX:ND=66:Condition=0]):0.0001[&&NHX:ND=67:Condition=0],(mus_musculus_wsbeij:0.00183[&&NHX:ND=68:Condition=0],(mus_musculus_nodshiltj:0.00145[&&NHX:ND=69:Condition=0],mus_musculus_fvbnj:0.00095[&&NHX:ND=70:Condition=0]):0.00046[&&NHX:ND=71:Condition=0]):0.0001[&&NHX:ND=72:Condition=0]):0.0001[&&NHX:ND=73:Condition=0]):0.00028[&&NHX:ND=74:Condition=0]):0.0001[&&NHX:ND=75:Condition=0]):0.00301[&&NHX:ND=76:Condition=0]):0.00044[&&NHX:ND=77:Condition=0]):0.00566[&&NHX:ND=78:Condition=0]):0.01055[&&NHX:ND=79:Condition=0]):0.01672[&&NHX:ND=80:Condition=0]):0.02326[&&NHX:ND=81:Condition=0]):0.01744[&&NHX:ND=82:Condition=0]):0.01323[&&NHX:ND=83:Condition=0]):0.00918[&&NHX:ND=84:Condition=0]):0.00747[&&NHX:ND=85:Condition=0]):0.00124[&&NHX:ND=86:Condition=0]):0.00365[&&NHX:ND=87:Condition=0]):0.00185[&&NHX:ND=88:Condition=0],tupaia_belangeri:0.09888[&&NHX:ND=89:Condition=0]):0.0001[&&NHX:ND=90:Condition=0],(((propithecus_coquereli:0.0424[&&NHX:ND=91:Condition=0],microcebus_murinus:0.0412[&&NHX:ND=92:Condition=0]):0.02776[&&NHX:ND=93:Condition=0],otolemur_garnettii:0.07575[&&NHX:ND=94:Condition=0]):0.0073[&&NHX:ND=95:Condition=0],(carlito_syrichta:0.0799[&&NHX:ND=96:Condition=0],((((saimiri_boliviensis_boliviensis:0.02639[&&NHX:ND=97:Condition=0],cebus_capucinus:0.02594[&&NHX:ND=98:Condition=0]):0.00278[&&NHX:ND=99:Condition=0],callithrix_jacchus:0.03[&&NHX:ND=100:Condition=0]):0.0001[&&NHX:ND=101:Condition=0],aotus_nancymaae:0.02501[&&NHX:ND=102:Condition=0]):0.02357[&&NHX:ND=103:Condition=0],((((((pan_paniscus:0.00307[&&NHX:ND=104:Condition=0],pan_troglodytes:0.00247[&&NHX:ND=105:Condition=0]):0.0043[&&NHX:ND=106:Condition=0],homo_sapiens:0.00661[&&NHX:ND=107:Condition=0]):0.00176[&&NHX:ND=108:Condition=0],gorilla_gorilla:0.00868[&&NHX:ND=109:Condition=0]):0.00836[&&NHX:ND=110:Condition=0],pongo_abelii:0.01726[&&NHX:ND=111:Condition=0]):0.00283[&&NHX:ND=112:Condition=0],nomascus_leucogenys:0.01961[&&NHX:ND=113:Condition=0]):0.01078[&&NHX:ND=114:Condition=0],(((rhinopithecus_roxellana:0.0021[&&NHX:ND=115:Condition=0],rhinopithecus_bieti:0.00301[&&NHX:ND=116:Condition=0]):0.00939[&&NHX:ND=117:Condition=0],colobus_angolensis_palliatus:0.01232[&&NHX:ND=118:Transition=1:Condition=1]):0.00505[&&NHX:ND=119:Condition=0],(chlorocebus_sabaeus:0.0117[&&NHX:ND=120:Condition=0],(((mandrillus_leucophaeus:0.00665[&&NHX:ND=121:Condition=0],cercocebus_atys:0.0058[&&NHX:ND=122:Condition=0]):0.00064[&&NHX:ND=123:Condition=0],papio_anubis:0.00666[&&NHX:ND=124:Condition=0]):0.0012[&&NHX:ND=125:Condition=0],((macaca_mulatta:0.00233[&&NHX:ND=126:Condition=0],macaca_fascicularis:0.00215[&&NHX:ND=127:Condition=0]):0.00095[&&NHX:ND=128:Condition=0],macaca_nemestrina:0.00418[&&NHX:ND=129:Condition=0]):0.00433[&&NHX:ND=130:Condition=0]):0.00401[&&NHX:ND=131:Condition=0]):0.00475[&&NHX:ND=132:Condition=0]):0.01388[&&NHX:ND=133:Condition=0]):0.0176[&&NHX:ND=134:Condition=0]):0.02753[&&NHX:ND=135:Condition=0]):0.00099[&&NHX:ND=136:Condition=0]):0.01976[&&NHX:ND=137:Condition=0]):0.0001[&&NHX:ND=138:Condition=0],((erinaceus_europaeus:0.10146[&&NHX:ND=139:Transition=1:Condition=1],sorex_araneus:0.10725[&&NHX:ND=140:Condition=0]):0.004[&&NHX:ND=141:Condition=0],((((tursiops_truncatus:0.06798[&&NHX:ND=142:Condition=0],(((capra_hircus:0.01127[&&NHX:ND=143:Condition=0],ovis_aries:0.01107[&&NHX:ND=144:Condition=0]):0.01687[&&NHX:ND=145:Condition=0],bos_taurus:0.02703[&&NHX:ND=146:Condition=0]):0.05573[&&NHX:ND=147:Condition=0],(vicugna_pacos:0.08218[&&NHX:ND=148:Condition=0],sus_scrofa:0.07611[&&NHX:ND=149:Condition=0]):0.00086[&&NHX:ND=150:Condition=0]):0.0001[&&NHX:ND=151:Condition=0]):0.01334[&&NHX:ND=152:Condition=0],equus_caballus:0.0817[&&NHX:ND=153:Condition=0]):0.0044[&&NHX:ND=154:Condition=0],(pteropus_vampyrus:0.07973[&&NHX:ND=155:Transition=1:Condition=1],myotis_lucifugus:0.08293[&&NHX:ND=156:Condition=0]):0.00724[&&NHX:ND=157:Condition=0]):0.0001[&&NHX:ND=158:Condition=0],(felis_catus:0.06559[&&NHX:ND=159:Condition=0],((mustela_putorius_furo:0.05565[&&NHX:ND=160:Condition=0],ailuropoda_melanoleuca:0.0549[&&NHX:ND=161:Transition=1:Condition=1]):0.00652[&&NHX:ND=162:Condition=0],canis_familiaris:0.05998[&&NHX:ND=163:Condition=0]):0.00575[&&NHX:ND=164:Condition=0]):0.01641[&&NHX:ND=165:Condition=0]):0.01276[&&NHX:ND=166:Condition=0]):0.00018[&&NHX:ND=167:Condition=0]):0.0001[&&NHX:ND=168:Condition=0]):0.00274[&&NHX:ND=169:Condition=0]):0.01154[&&NHX:ND=170:Condition=0]):0.00682[&&NHX:ND=171:Condition=0]):0[&&NHX:ND=172:Condition=0];
(ornithorhynchus_anatinus:0.1278[&&NHX:ND=0:Condition=0],(((sarcophilus_harrisii:0.06813[&&NHX:ND=1:Condition=0],notamacropus_eugenii:0.07663[&&NHX:ND=2:Condition=0]):0.00305[&&NHX:ND=3:Condition=0],monodelphis_domestica:0.07637[&&NHX:ND=4:Transition=1:Condition=1]):0.04008[&&NHX:ND=5:Condition=0],(((loxodonta_africana:0.06161[&&NHX:ND=6:Condition=0],procavia_capensis:0.07695[&&NHX:ND=7:Condition=0]):0.01578[&&NHX:ND=8:Condition=0],echinops_telfairi:0.09765[&&NHX:ND=9:Condition=0]):0.02562[&&NHX:ND=10:Condition=0],((dasypus_novemcinctus:0.07725[&&NHX:ND=11:Condition=0],choloepus_hoffmanni:0.0787[&&NHX:ND=12:Condition=0]):0.02781[&&NHX:ND=13:Condition=0],(((((oryctolagus_cuniculus:0.07649[&&NHX:ND=14:Condition=0],ochotona_princeps:0.09226[&&NHX:ND=15:Condition=0]):0.02465[&&NHX:ND=16:Condition=0],((((((cavia_aperea:0.01305[&&NHX:ND=17:Condition=0],cavia_porcellus:0.00765[&&NHX:ND=18:Condition=0]):0.06702[&&NHX:ND=19:Condition=0],chinchilla_lanigera:0.06971[&&NHX:ND=20:Condition=0]):0.00361[&&NHX:ND=21:Condition=0],octodon_degus:0.07621[&&NHX:ND=22:Condition=0]):0.00219[&&NHX:ND=23:Condition=0],((heterocephalus_glaber_female:0.00045[&&NHX:ND=24:Condition=0],heterocephalus_glaber_male:0.00082[&&NHX:ND=25:Condition=0]):0.05583[&&NHX:ND=26:Condition=0],fukomys_damarensis:0.05811[&&NHX:ND=27:Condition=0]):0.01878[&&NHX:ND=28:Condition=0]):0.02107[&&NHX:ND=29:Condition=0],ictidomys_tridecemlineatus:0.08987[&&NHX:ND=30:Condition=0]):0.00443[&&NHX:ND=31:Condition=0],(dipodomys_ordii:0.10007[&&NHX:ND=32:Condition=0],(jaculus_jaculus:0.09418[&&NHX:ND=33:Condition=0],(nannospalax_galili:0.08691[&&NHX:ND=34:Condition=0],(((((cricetulus_griseus_chok1gshd:0.00024[&&NHX:ND=35:Condition=0],cricetulus_griseus_crigri:0.00077[&&NHX:ND=36:Condition=0]):0.04865[&&NHX:ND=37:Condition=0],mesocricetus_auratus:0.05241[&&NHX:ND=38:Condition=0]):0.01641[&&NHX:ND=39:Condition=0],peromyscus_maniculatus_bairdii:0.06366[&&NHX:ND=40:Condition=0]):0.00279[&&NHX:ND=41:Condition=0],microtus_ochrogaster:0.07073[&&NHX:ND=42:Condition=0]):0.01053[&&NHX:ND=43:Condition=0],(rattus_norvegicus:0.06307[&&NHX:ND=44:Condition=0],(mus_pahari:0.03682[&&NHX:ND=45:Condition=0],(mus_caroli:0.02056[&&NHX:ND=46:Condition=0],(mus_spretus:0.01046[&&NHX:ND=47:Condition=0],(mus_musculus_casteij:0.00509[&&NHX:ND=48:Transition=1:Condition=1],(mus_musculus_pwkphj:0.00538[&&NHX:ND=49:Condition=0],(mus_musculus_nzohlltj:0.00134[&&NHX:ND=50:Condition=0],((mus_musculus_c57bl6nj:0.00064[&&NHX:ND=51:Condition=0],mus_musculus:0.0001[&&NHX:ND=52:Condition=0]):0.00094[&&NHX:ND=53:Condition=0],((mus_musculus_lpj:0.00058[&&NHX:ND=54:Condition=0],mus_musculus_129s1svimj:0.00049[&&NHX:ND=55:Condition=0]):0.00094[&&NHX:ND=56:Condition=0],(((((mus_musculus_c3hhej:0.00038[&&NHX:ND=57:Condition=0],mus_musculus_cbaj:0.00054[&&NHX:ND=58:Condition=0]):0.00026[&&NHX:ND=59:Condition=0],mus_musculus_dba2j:0.00112[&&NHX:ND=60:Condition=0]):0.00027[&&NHX:ND=61:Condition=0],(mus_musculus_aj:0.00037[&&NHX:ND=62:Condition=0],mus_musculus_balbcj:0.00091[&&NHX:ND=63:Condition=0]):0.0001[&&NHX:ND=64:Condition=0]):0.00028[&&NHX:ND=65:Condition=0],mus_musculus_akrj:0.00075[&&NHX:ND=66:Condition=0]):0.0001[&&NHX:ND=67:Condition=0],(mus_musculus_wsbeij:0.00183[&&NHX:ND=68:Condition=0],(mus_musculus_nodshiltj:0.00145[&&NHX:ND=69:Condition=0],mus_musculus_fvbnj:0.00095[&&NHX:ND=70:Condition=0]):0.00046[&&NHX:ND=71:Condition=0]):0.0001[&&NHX:ND=72:Condition=0]):0.0001[&&NHX:ND=73:Condition=0]):0.00028[&&NHX:ND=74:Condition=0]):0.0001[&&NHX:ND=75:Condition=0]):0.00301[&&NHX:ND=76:Condition=0]):0.00044[&&NHX:ND=77:Condition=0]):0.00566[&&NHX:ND=78:Condition=0]):0.01055[&&NHX:ND=79:Condition=0]):0.01672[&&NHX:ND=80:Condition=0]):0.02326[&&NHX:ND=81:Condition=0]):0.01744[&&NHX:ND=82:Condition=0]):0.01323[&&NHX:ND=83:Condition=0]):0.00918[&&NHX:ND=84:Condition=0]):0.00747[&&NHX:ND=85:Condition=0]):0.00124[&&NHX:ND=86:Condition=0]):0.00365[&&NHX:ND=87:Condition=0]):0.00185[&&NHX:ND=88:Condition=0],tupaia_belangeri:0.09888[&&NHX:ND=89:Condition=0]):0.0001[&&NHX:ND=90:Condition=0],(((propithecus_coquereli:0.0424[&&NHX:ND=91:Condition=0],microcebus_murinus:0.0412[&&NHX:ND=92:Condition=0]):0.02776[&&NHX:ND=93:Condition=0],otolemur_garnettii:0.07575[&&NHX:ND=94:Condition=0]):0.0073[&&NHX:ND=95:Condition=0],(carlito_syrichta:0.0799[&&NHX:ND=96:Condition=0],((((saimiri_boliviensis_boliviensis:0.02639[&&NHX:ND=97:Condition=1],cebus_capucinus:0.02594[&&NHX:ND=98:Condition=1]):0.00278[&&NHX:ND=99:Condition=1],callithrix_jacchus:0.03[&&NHX:ND=100:Condition=1]):0.0001[&&NHX:ND=101:Transition=1:Condition=1],aotus_nancymaae:0.02501[&&NHX:ND=102:Condition=0]):0.02357[&&NHX:ND=103:Condition=0],((((((pan_paniscus:0.00307[&&NHX:ND=104:Condition=0],pan_troglodytes:0.00247[&&NHX:ND=105:Condition=0]):0.0043[&&NHX:ND=106:Condition=0],homo_sapiens:0.00661[&&NHX:ND=107:Condition=0]):0.00176[&&NHX:ND=108:Condition=0],gorilla_gorilla:0.00868[&&NHX:ND=109:Condition=0]):0.00836[&&NHX:ND=110:Condition=0],pongo_abelii:0.01726[&&NHX:ND=111:Condition=0]):0.00283[&&NHX:ND=112:Condition=0],nomascus_leucogenys:0.01961[&&NHX:ND=113:Condition=0]):0.01078[&&NHX:ND=114:Condition=0],(((rhinopithecus_roxellana:0.0021[&&NHX:ND=115:Condition=0],rhinopithecus_bieti:0.00301[&&NHX:ND=116:Condition=0]):0.00939[&&NHX:ND=117:Condition=0],colobus_angolensis_palliatus:0.01232[&&NHX:ND=118:Condition=0]):0.00505[&&NHX:ND=119:Condition=0],(chlorocebus_sabaeus:0.0117[&&NHX:ND=120:Condition=0],(((mandrillus_leucophaeus:0.00665[&&NHX:ND=121:Condition=0],cercocebus_atys:0.0058[&&NHX:ND=122:Condition=0]):0.00064[&&NHX:ND=123:Condition=0],papio_anubis:0.00666[&&NHX:ND=124:Transition=1:Condition=1]):0.0012[&&NHX:ND=125:Condition=0],((macaca_mulatta:0.00233[&&NHX:ND=126:Condition=0],macaca_fascicularis:0.00215[&&NHX:ND=127:Transition=1:Condition=1]):0.00095[&&NHX:ND=128:Condition=0],macaca_nemestrina:0.00418[&&NHX:ND=129:Condition=0]):0.00433[&&NHX:ND=130:Condition=0]):0.00401[&&NHX:ND=131:Condition=0]):0.00475[&&NHX:ND=132:Condition=0]):0.01388[&&NHX:ND=133:Condition=0]):0.0176[&&NHX:ND=134:Condition=0]):0.02753[&&NHX:ND=135:Condition=0]):0.00099[&&NHX:ND=136:Condition=0]):0.01976[&&NHX:ND=137:Condition=0]):0.0001[&&NHX:ND=138:Condition=0],((erinaceus_europaeus:0.10146[&&NHX:ND=139:Condition=0],sorex_araneus:0.10725[&&NHX:ND=140:Condition=0]):0.004[&&NHX:ND=141:Condition=0],((((tursiops_truncatus:0.06798[&&NHX:ND=142:Condition=0],(((capra_hircus:0.01127[&&NHX:ND=143:Condition=0],ovis_aries:0.01107[&&NHX:ND=144:Condition=0]):0.01687[&&NHX:ND=145:Condition=0],bos_taurus:0.02703[&&NHX:ND=146:Condition=0]):0.05573[&&NHX:ND=147:Condition=0],(vicugna_pacos:0.08218[&&NHX:ND=148:Condition=0],sus_scrofa:0.07611[&&NHX:ND=149:Condition=0]):0.00086[&&NHX:ND=150:Condition=0]):0.0001[&&NHX:ND=151:Condition=0]):0.01334[&&NHX:ND=152:Condition=0],equus_caballus:0.0817[&&NHX:ND=153:Condition=0]):0.0044[&&NHX:ND=154:Condition=0],(pteropus_vampyrus:0.07973[&&NHX:ND=155:Condition=0],myotis_lucifugus:0.08293[&&NHX:ND=156:Condition=0]):0.00724[&&NHX:ND=157:Condition=0]):0.0001[&&NHX:ND=158:Condition=0],(felis_catus:0.06559[&&NHX:ND=159:Condition=0],((mustela_putorius_furo:0.05565[&&NHX:ND=160:Condition=0],ailuropoda_melanoleuca:0.0549[&&NHX:ND=161:Condition=0]):0.00652[&&NHX:ND=162:Condition=0],canis_familiaris:0.05998[&&NHX:ND=163:Condition=0]):0.00575[&&NHX:ND=164:Condition=0]):0.01641[&&NHX:ND=165:Condition=0]):0.01276[&&NHX:ND=166:Condition=0]):0.00018[&&NHX:ND=167:Condition=0]):0.0001[&&NHX:ND=168:Condition=0]):0.00274[&&NHX:ND=169:Condition=0]):0.01154[&&NHX:ND=170:Condition=0]):0.00682[&&NHX:ND=171:Condition=0]):0[&&NHX:ND=172:Condition=0];
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