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VEBER Philippe
codepi
Commits
a062c9ca
Commit
a062c9ca
authored
Aug 13, 2018
by
LANORE Vincent
Browse files
Updated diffsel docker to "dirty fix" version :)
parent
bc34bfc2
Changes
3
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3 changed files
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3 additions
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3 deletions
+3
-3
etc/docker/diffsel/build_docker.sh
etc/docker/diffsel/build_docker.sh
+1
-1
lib/diffsel.ml
lib/diffsel.ml
+1
-1
lib/pipeline.ml
lib/pipeline.ml
+1
-1
No files found.
etc/docker/diffsel/build_docker.sh
View file @
a062c9ca
...
...
@@ -4,7 +4,7 @@ set -e
IMAGE_NAME
=
diffsel
DOCKERFILE_DIR
=
.
TAG
=
master_
2304
TAG
=
master_
a4b5
REPO
=
vlanore/
$IMAGE_NAME
:
$TAG
docker build
-t
$REPO
-f
./Dockerfile
$DOCKERFILE_DIR
...
...
lib/diffsel.ml
View file @
a062c9ca
...
...
@@ -123,7 +123,7 @@ let check_conv run_diffsel : text_file directory workflow =
]
let
selector
run_diffsel
:
text_file
workflow
=
let
env
=
docker_image
~
account
:
"vlanore"
~
name
:
"diffsel"
~
tag
:
"master_
2304
"
()
in
let
env
=
docker_image
~
account
:
"vlanore"
~
name
:
"diffsel"
~
tag
:
"master_
a4b5
"
()
in
let
package
=
tmp
//
"diffsel_script_utils.py"
in
let
script
=
tmp
//
"diffsel_analyze_result.py"
in
let
tmp_tree
=
tmp
//
"myrun.tree"
in
...
...
lib/pipeline.ml
View file @
a062c9ca
...
...
@@ -243,7 +243,7 @@ let derive_from_det_meth ~det_meth ~(dataset : Dataset.t) ~preview =
|
`Pcoc_gamma
->
`Pcoc_gamma
(
Pcoc
.
pcoc
~
catx_est
:
10
~
plot_complete
:
true
~
gamma
:
true
~
faa
~
tree
:
tree_sc
)
|
`Pcoc_C60
->
`Pcoc_C60
(
Pcoc
.
pcoc
~
catx_est
:
60
~
plot_complete
:
true
~
gamma
:
false
~
faa
~
tree
:
tree_sc
)
|
`Tdg09
->
`Tdg09
(
Tamuri
.
tdg09
~
faa
~
tree
:
tree_sc
)
|
`Diffsel
->
`Diffsel
(
Diffsel
.
diffsel
~
phy_n
~
tree
:
diffsel_tree
~
w_every
~
n_cycles
~
id
:
1
~
tag
:
"master_
2304
"
)
|
`Diffsel
->
`Diffsel
(
Diffsel
.
diffsel
~
phy_n
~
tree
:
diffsel_tree
~
w_every
~
n_cycles
~
id
:
1
~
tag
:
"master_
a4b5
"
)
|
`Identical_LG
->
`Identical_LG
(
Identical
.
identical
~
faa
~
tree_id
~
tree_sc
~
prot_model
:
"LG08"
)
|
`Identical_WAG
->
`Identical_WAG
(
Identical
.
identical
~
faa
~
tree_id
~
tree_sc
~
prot_model
:
"WAG01"
)
|
`Topological_LG
->
`Topological_LG
(
Topological
.
topological
~
faa
~
tree
:
tree_id
~
tree_conv
~
prot_model
:
"LG08"
)
...
...
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