Commit a2a02222 authored by Carine Rey's avatar Carine Rey
Browse files

add real data analyse

parent 7ee9fe7d
......@@ -33,6 +33,16 @@ test:
mv dag.dot dagtest.dot && \
dot -Tsvg dagtest.dot -o dagtest.svg
test_real:
cd example && \
reviewphiltrans pipeline --outdir outdir_real_data --indir real_data --tree-dir trees --profile-fn aa_fitness/tiragesBloomK30.tsv --preview --np 4
mv dag.dot dagtest_real.dot && \
dot -Tpdf dagtest_real.dot -o dagtest_real.pdf
real:
cd example && \
reviewphiltrans pipeline --outdir outdir_real_data --indir real_data --tree-dir trees --profile-fn aa_fitness/tiragesBloomK30.tsv --np 4
analyses_test:
cd example && \
reviewphiltrans pipeline --outdir outdir_analyses_test --tree-dir trees4analyses --profile-fn aa_fitness/tiragesBloomK30.tsv --preview --np 4 && \
......
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