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VEBER Philippe
codepi
Commits
aed9c6ab
Commit
aed9c6ab
authored
Aug 31, 2018
by
Carine Rey
Browse files
update totake into account indels
parent
6fab92e8
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lib/identical.ml
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aed9c6ab
...
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@@ -55,6 +55,9 @@ let conf_file_bppancestor ~tree ~faa ~out ~config =
assign
"OUT"
(
out
)
;
assign
"input.sequence.file"
(
dep
faa
)
;
assign
"alphabet"
(
string
"Protein"
)
;
assign
"input.sequence.remove_stop_codons"
(
string
"no"
)
;
assign
"input.sequence.sites_to_use"
(
string
"all"
)
;
assign
"input.sequence.remove_saturated_sites"
(
string
"yes"
)
;
assign
"input.tree.file"
(
dep
tree
)
;
assign
"init.tree"
(
string
"user"
)
;
...
...
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