Commit b00aa6f2 authored by Philippe Veber's avatar Philippe Veber
Browse files

added an example orthomam tree

parent 0df6b782
(Acinonyx_jubatus:0.001811802[&&NHX:Condition=0],(((((Ailuropoda_melanoleuca:0.0053677041[&&NHX:Condition=0],Ursus_maritimus:0.0036501055[&&NHX:Condition=0]):0.0060322299[&&NHX:Condition=0],((Enhydra_lutris_kenyoni:0.0031428392[&&NHX:Condition=0],Mustela_putorius:0.0043020444[&&NHX:Condition=0]):0.0076528825[&&NHX:Condition=0],((Leptonychotes_weddellii:0.0025431129[&&NHX:Condition=0],Neomonachus_schauinslandi:0.0015017017[&&NHX:Condition=0]):0.0037322099[&&NHX:Condition=0],Odobenus_rosmarus_divergens:0.0058654722[&&NHX:Condition=0]):0.0041877403[&&NHX:Condition=0]):0.0007517561[&&NHX:Condition=0]):0.0026659196[&&NHX:Condition=0],Canis_familiaris:0.0136522978[&&NHX:Condition=0]):0.0026328505[&&NHX:Condition=0],((((((((((((Aotus_nancymaae:0.0037520743[&&NHX:Condition=0],Callithrix_jacchus:0.0058661457[&&NHX:Condition=0]):0.0005229138[&&NHX:Condition=0],(Cebus_capucinus:0.0048206127[&&NHX:Condition=0],Saimiri_boliviensis:0.0044121311[&&NHX:Condition=0]):0.000527605[&&NHX:Condition=0]):0.008412666[&&NHX:Condition=0],((((((Cercocebus_atys:0.000986339[&&NHX:Condition=0],Mandrillus_leucophaeus:0.001134806[&&NHX:Condition=0]):0.0002527519[&&NHX:Condition=0],Papio_anubis:0.0011619558[&&NHX:Condition=0]):0.0001141851[&&NHX:Condition=0],((Macaca_fascicularis:0.0005969308[&&NHX:Condition=0],Macaca_mulatta:0.0003410324[&&NHX:Condition=0]):0.0003939349[&&NHX:Condition=0],Macaca_nemestrina:0.0007451737[&&NHX:Condition=0]):0.0004922643[&&NHX:Condition=0]):0.0003213234[&&NHX:Condition=0],Chlorocebus_sabaeus:0.0026125403[&&NHX:Condition=0]):0.0009039984[&&NHX:Condition=0],((Colobus_angolensis:0.002028445[&&NHX:Condition=0],Piliocolobus_tephrosceles:0.0020240186[&&NHX:Condition=0]):0.0004790443[&&NHX:Condition=0],(Rhinopithecus_bieti:0.0006277632[&&NHX:Condition=0],Rhinopithecus_roxellana:0.0007534802[&&NHX:Condition=0]):0.0014323126[&&NHX:Condition=0]):0.0009925105[&&NHX:Condition=0]):0.0026976481[&&NHX:Condition=0],(((Gorilla_gorilla:0.0015825756[&&NHX:Condition=0],(Homo_sapiens:0.0008995988[&&NHX:Condition=0],(Pan_paniscus:0.0007496198[&&NHX:Condition=0],Pan_troglodytes:0.0010027083[&&NHX:Condition=0]):0.0009362334[&&NHX:Condition=0]):0.0003828841[&&NHX:Condition=0]):0.0016694703[&&NHX:Condition=0],Pongo_abelii:0.0039454417[&&NHX:Condition=0]):0.0002503954[&&NHX:Condition=0],Nomascus_leucogenys:0.0050232352[&&NHX:Condition=0]):0.0013317213[&&NHX:Condition=0]):0.0026384335[&&NHX:Condition=0]):0.0100856244[&&NHX:Condition=0],Carlito_syrichta:0.0230105222[&&NHX:Condition=0]):0.0017523408[&&NHX:Condition=0],((Microcebus_murinus:0.0096144602[&&NHX:Condition=0],Propithecus_coquereli:0.0069966565[&&NHX:Condition=0]):0.0067792052[&&NHX:Condition=0],Otolemur_garnettii:0.0219526614[&&NHX:Condition=0]):0.0064200062[&&NHX:Condition=0]):0.0017118012[&&NHX:Condition=0],Galeopterus_variegatus:0.022618483[&&NHX:Condition=0]):0.0008412027[&&NHX:Condition=0],((((((Castor_canadensis:0.0207331096[&&NHX:Condition=0],Dipodomys_ordii:0.0332812098[&&NHX:Condition=0]):0.0044488557[&&NHX:Condition=0],((((((Cricetulus_griseus:0.0079796578[&&NHX:Condition=0],Mesocricetus_auratus:0.010952293[&&NHX:Condition=0]):0.0055468792[&&NHX:Condition=0],Microtus_ochrogaster:0.0176325247[&&NHX:Condition=0]):0.0011557066[&&NHX:Condition=0],Peromyscus_maniculatus:0.0132806892[&&NHX:Condition=0]):0.0043066573[&&NHX:Condition=0],(Meriones_unguiculatus:0.0219025577[&&NHX:Condition=0],(((Mus_caroli:0.0038262436[&&NHX:Condition=0],(Mus_musculus:0.0011114372[&&NHX:Condition=0],Mus_spretus:0.0017525611[&&NHX:Condition=0]):0.0018209161[&&NHX:Condition=0]):0.003976506[&&NHX:Condition=0],Mus_pahari:0.0077960948[&&NHX:Condition=0]):0.0069296504[&&NHX:Condition=0],Rattus_norvegicus:0.0165093095[&&NHX:Condition=0]):0.0104026651[&&NHX:Condition=0]):0.0031810586[&&NHX:Condition=0]):0.0144286442[&&NHX:Condition=0],Nannospalax_galili:0.0214687233[&&NHX:Condition=0]):0.0057208501[&&NHX:Condition=0],Jaculus_jaculus:0.036445044[&&NHX:Condition=0]):0.0060689479[&&NHX:Condition=0]):0.002513992[&&NHX:Condition=0],(((Cavia_aperea:0.0028014849[&&NHX:Condition=0],Cavia_porcellus:0.0009612035[&&NHX:Condition=0]):0.021923942[&&NHX:Condition=0],(Chinchilla_lanigera:0.0127698735[&&NHX:Condition=0],Octodon_degus:0.0211425003[&&NHX:Condition=0]):0.0030692626[&&NHX:Condition=0]):0.0039990058[&&NHX:Condition=0],(Fukomys_damarensis:0.0168366009[&&NHX:Condition=0],Heterocephalus_glaber:0.0138291115[&&NHX:Condition=0]):0.0084993461[&&NHX:Condition=0]):0.0192751447[&&NHX:Condition=0]):0.0005803166[&&NHX:Condition=0],(Ictidomys_tridecemlineatus:0.0030423881[&&NHX:Condition=0],Marmota_marmota_marmota:0.0025863802[&&NHX:Condition=0]):0.0204622739[&&NHX:Condition=0]):0.0047079679[&&NHX:Condition=0],(Ochotona_princeps:0.0372446958[&&NHX:Condition=0],Oryctolagus_cuniculus:0.0161182032[&&NHX:Condition=0]):0.0143874709[&&NHX:Condition=0]):0.0014968782[&&NHX:Condition=0],(Tupaia_belangeri:0.0040023919[&&NHX:Condition=0],Tupaia_chinensis:0.0006421421[&&NHX:Condition=0]):0.0267597629[&&NHX:Condition=0]):0.0005911166[&&NHX:Condition=0]):0.0033192128[&&NHX:Condition=0],(((Choloepus_hoffmanni:0.0261840905[&&NHX:Condition=0],Dasypus_novemcinctus:0.0212463504[&&NHX:Condition=0]):0.0108265771[&&NHX:Condition=0],((((Chrysochloris_asiatica:0.0257146665[&&NHX:Condition=0],Echinops_telfairi:0.0505755941[&&NHX:Condition=0]):0.0036327792[&&NHX:Condition=0],Elephantulus_edwardii:0.0375544994[&&NHX:Condition=0]):0.0008362176[&&NHX:Condition=0],Orycteropus_afer_afer:0.0218636264[&&NHX:Condition=0]):0.002528001[&&NHX:Condition=0],((Loxodonta_africana:0.0149451951[&&NHX:Condition=0],Procavia_capensis:0.0311917362[&&NHX:Condition=0]):0.0017311878[&&NHX:Condition=0],Trichechus_manatus_latirostris:0.0155734318[&&NHX:Condition=0]):0.0058932344[&&NHX:Condition=0]):0.0086780264[&&NHX:Condition=0]):0.0007290534[&&NHX:Condition=0],((Monodelphis_domestica:0.025262691[&&NHX:Condition=0],((Notamacropus_eugenii:0.01950411[&&NHX:Condition=0],Phascolarctos_cinereus:0.0141856921[&&NHX:Condition=0]):0.0031462077[&&NHX:Condition=0],Sarcophilus_harrisii:0.0182482111[&&NHX:Condition=0]):0.0069379763[&&NHX:Condition=0]):0.0424507234[&&NHX:Condition=0],Ornithorhynchus_anatinus:0.1019179099[&&NHX:Condition=0]):0.048480646[&&NHX:Condition=0]):0.003365809[&&NHX:Condition=0]):0.0042184718[&&NHX:Condition=0],(Condylura_cristata:0.0293779064[&&NHX:Condition=0],(Erinaceus_europaeus:0.0416059117[&&NHX:Condition=0],Sorex_araneus:0.0477585547[&&NHX:Condition=0]):0.0054095199[&&NHX:Condition=0]):0.0059880619[&&NHX:Condition=0]):0.0012445132[&&NHX:Condition=0],(((Eptesicus_fuscus:0.0077763003[&&NHX:Condition=1],((Myotis_brandtii:0.00153102[&&NHX:Condition=1],Myotis_lucifugus:0.0023528839[&&NHX:Condition=1]):0.0013315094[&&NHX:Condition=1],Myotis_davidii:0.0056320179[&&NHX:Condition=1]):0.0054596435[&&NHX:Condition=1]):0.0125626565[&&NHX:Condition=1],Miniopterus_natalensis:0.017535741[&&NHX:Condition=1]):0.0107531875[&&NHX:Condition=1],((Hipposideros_armiger:0.0139434874[&&NHX:Condition=1],Rhinolophus_sinicus:0.0123276788[&&NHX:Condition=1]):0.0077611554[&&NHX:Condition=1],((Pteropus_alecto:0.0007031109[&&NHX:Condition=0],Pteropus_vampyrus:0.0030382249[&&NHX:Condition=0]):0.0054604258[&&NHX:Transition=0:Condition=0],Rousettus_aegyptiacus:0.0073411098[&&NHX:Condition=1]):0.0155636068[&&NHX:Condition=1]):0.0014019743[&&NHX:Condition=1]):0.0047004852[&&NHX:Transition=1:Condition=1]):0.0004182552[&&NHX:Condition=0],(((((Balaenoptera_acutorostrata_scammoni:0.0058023609[&&NHX:Condition=1],(((Delphinapterus_leucas:0.0026026558[&&NHX:Condition=1],(Orcinus_orca:0.0007773677[&&NHX:Condition=1],Tursiops_truncatus:0.0023982929[&&NHX:Condition=1]):0.0018831634[&&NHX:Condition=1]):0.0012066183[&&NHX:Condition=1],Lipotes_vexillifer:0.0040257704[&&NHX:Condition=1]):0.0025420819[&&NHX:Condition=1],Physeter_catodon:0.0066021028[&&NHX:Condition=1]):0.0009662883[&&NHX:Condition=1]):0.0088058347[&&NHX:Transition=1:Condition=1],(((((Bison_bison_bison:0.0009346754[&&NHX:Condition=0],Bos_mutus:0.0009996107[&&NHX:Condition=0]):0.0001968743[&&NHX:Condition=0],(Bos_indicus:0.0002688413[&&NHX:Condition=0],Bos_taurus:0.0005762527[&&NHX:Condition=0]):0.0004433829[&&NHX:Condition=0]):0.0020892113[&&NHX:Condition=0],Bubalus_bubalis:0.0031291339[&&NHX:Condition=0]):0.0026081535[&&NHX:Condition=0],((Capra_hircus:0.0014050855[&&NHX:Condition=0],Ovis_aries:0.0018714213[&&NHX:Condition=0]):0.0011079238[&&NHX:Condition=0],Pantholops_hodgsonii:0.0032902531[&&NHX:Condition=0]):0.0033444535[&&NHX:Condition=0]):0.0014238904[&&NHX:Condition=0],Odocoileus_virginianus_texanus:0.0077044317[&&NHX:Condition=0]):0.0146149532[&&NHX:Condition=0]):0.003418816[&&NHX:Condition=0],Sus_scrofa:0.0178049794[&&NHX:Condition=0]):0.0017374347[&&NHX:Condition=0],(((Camelus_bactrianus:0.000212251[&&NHX:Condition=0],Camelus_ferus:0.0004380392[&&NHX:Condition=0]):0.0004486884[&&NHX:Condition=0],Camelus_dromedarius:0.0004820954[&&NHX:Condition=0]):0.0024139348[&&NHX:Condition=0],Vicugna_pacos:0.0066574611[&&NHX:Condition=0]):0.0142404939[&&NHX:Condition=0]):0.0066003455[&&NHX:Condition=0],(Ceratotherium_simum_simum:0.0112734794[&&NHX:Condition=0],(Equus_asinus:0.0016245653[&&NHX:Condition=0],(Equus_caballus:0.0009656713[&&NHX:Condition=0],Equus_przewalskii:0.0003443721[&&NHX:Condition=0]):0.0005666841[&&NHX:Condition=0]):0.0112833394[&&NHX:Condition=0]):0.0066033793[&&NHX:Condition=0]):0.0003564031[&&NHX:Condition=0]):0.0023080156[&&NHX:Condition=0],Manis_javanica:0.0307895997[&&NHX:Condition=0]):0.0068017547[&&NHX:Condition=0]):0.0099817528[&&NHX:Condition=0],(Panthera_pardus:0.0007436666[&&NHX:Condition=0],Panthera_tigris_altaica:0.0004474315[&&NHX:Condition=0]):0.0006270233[&&NHX:Condition=0]):0.0001845326[&&NHX:Condition=0],Felis_catus:0.0009349121[&&NHX:Condition=0]);
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