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VEBER Philippe
codepi
Commits
b808b7d1
Commit
b808b7d1
authored
Jan 17, 2019
by
Philippe Veber
Browse files
Pipeline2: added diffsel
parent
f4afdeb5
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lib/pipeline2.ml
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b808b7d1
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@@ -67,6 +67,15 @@ let nucleotide_alignment (Simulation _ as d) =
let
phylip_nucleotide_alignment
d
=
Bppsuite
.
fna2phy
~
fna
:
(
nucleotide_alignment
d
)
let
diffsel
d
=
Diffsel
.
diffsel
~
phy_n
:
(
phylip_nucleotide_alignment
d
)
~
tree
:
(
tree
d
)
~
w_every
:
1
~
n_cycles
:
50
()
|>
Diffsel
.
selector
let
diffseldsparse
d
=
Diffseldsparse
.
diffseldsparse
~
alignment
:
(
phylip_nucleotide_alignment
d
)
...
...
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