Commit b841e7c4 authored by Philippe Veber's avatar Philippe Veber
Browse files

custom docker image for R/P curve

parent fa489a85
......@@ -4,8 +4,8 @@ set -e
IMAGE_NAME=r_basics
DOCKERFILE_DIR=.
TAG=09072018
REPO=carinerey/$IMAGE_NAME:$TAG
TAG=20190710
REPO=pveber/$IMAGE_NAME:$TAG
docker build -t $REPO -f ./Dockerfile $DOCKERFILE_DIR
if [[ $1 == "push_yes" ]]
......
......@@ -180,8 +180,9 @@ let plot_convergent_sites ?(plot_all_sites = true) ~alignment ~detection_results
|> Fn.flip Workflow.select ["plot.svg"]
let recall_precision_curve table =
let img = [ docker_image ~account:"pveber" ~name:"r_basics" ~tag:"20190710" () ] in
Workflow.shell ~descr:"recall_precision_curve" [
cmd "Rscript" ~img:Env.env_r [
cmd "Rscript" ~img [
file_dump (string Scripts.recall_precision_curve) ;
dep table ;
dest ;
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment