Docker-in-Docker (DinD) capabilities of public runners deactivated. More info

Commit c27b2651 authored by Carine Rey's avatar Carine Rey
Browse files

update analyses

parent 86d04e07
......@@ -80,9 +80,12 @@ analyses_we:
.PHONY: analyses_night
analyses_night:
cd example && \
reviewphiltrans validation --outdir outdir_analyses_night --tree-dir trees_analyses_night --profile-fn aa_fitness/263SelectedProfiles.tsv --np 28 --ns 100 --fast && \
reviewphiltrans validation --outdir outdir_analyses_night --tree-dir trees_analyses_night --profile-fn aa_fitness/263SelectedProfiles.tsv --np 28 --ns 100 && \
mv dag.dot daganalyses_we.dot
reviewphiltrans validation --outdir outdir_analyses_night --tree-dir trees_analyses_night --profile-fn aa_fitness/263SelectedProfiles.tsv --np 27 --ns 100 --fast && \
reviewphiltrans validation --outdir outdir_analyses_night --tree-dir trees_analyses_night --profile-fn aa_fitness/263SelectedProfiles.tsv --np 27 --ns 100 --fast --ne-test && \
reviewphiltrans validation --outdir outdir_analyses_night --tree-dir trees_analyses_night --profile-fn aa_fitness/263SelectedProfiles.tsv --np 27 --ns 100 && \
reviewphiltrans validation --outdir outdir_analyses_night --tree-dir trees_analyses_night --profile-fn aa_fitness/263SelectedProfiles.tsv --np 27 --ns 100 --ne-test && \
mv dag.dot dag_analyses_night.dot
.PHONY: analyses_night2
analyses_night2:
......@@ -90,7 +93,7 @@ analyses_night2:
reviewphiltrans validation --outdir outdir_analyses_night2_ne_test --tree-dir trees_analyses_night2 --profile-fn aa_fitness/263SelectedProfiles.tsv --np 28 --ne-test --ns 100 --fast && \
reviewphiltrans validation --outdir outdir_analyses_night2 --tree-dir trees_analyses_night2 --profile-fn aa_fitness/263SelectedProfiles.tsv --np 28 --ns 100 && \
reviewphiltrans validation --outdir outdir_analyses_night2_ne_test --tree-dir trees_analyses_night2 --profile-fn aa_fitness/263SelectedProfiles.tsv --np 28 --ne-test --ns 100 && \
mv dag.dot outdir_analyses_night2.dot
mv dag.dot dag_analyses_night2.dot
# -----------------------------------------------------------------------
# Cleaning and formatting
......
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