Commit ce84ac24 authored by Carine Rey's avatar Carine Rey
Browse files

update Makefile

parent d6693c27
......@@ -74,10 +74,11 @@ real:
.PHONY: analyses_we
analyses_we:
cd example && \
#reviewphiltrans validation --outdir outdir_analyses_we_0914 --tree-dir trees_analyses_weekend --profile-fn aa_fitness/263SelectedProfiles.tsv --np 24 --ns 2000 --seed 2167988076475850536 ; \
#reviewphiltrans validation --outdir outdir_analyses_we_0914 --tree-dir trees_analyses_weekend --profile-fn aa_fitness/263SelectedProfiles.tsv --np 24 --ns 2000 --seed 2167988076475850536 --diffsel ; \
#cp trees4analyses_db/orthomam* trees_analyses_weekend/ ; \
reviewphiltrans validation --outdir outdir_analyses_we_0914 --tree-dir trees_analyses_weekend --profile-fn aa_fitness/263SelectedProfiles.tsv --np 24 --ns 2000 --seed 2167988076475850536 ; \
reviewphiltrans validation --outdir outdir_analyses_we_0914 --tree-dir trees_analyses_weekend --profile-fn aa_fitness/263SelectedProfiles.tsv --np 24 --ns 2000 --seed 2167988076475850536 --diffsel ; \
cp trees4analyses_db/orthomam* trees_analyses_weekend/ ; \
reviewphiltrans validation --outdir outdir_analyses_we_0914 --tree-dir trees_analyses_weekend --profile-fn aa_fitness/263SelectedProfiles.tsv --np 24 --ns 2000 --seed 2167988076475850536 ; \
reviewphiltrans validation --outdir outdir_analyses_we_0914 --tree-dir trees_analyses_weekend --profile-fn aa_fitness/263SelectedProfiles.tsv --np 24 --ns 2000 --seed 2167988076475850536 --diffsel ;\
reviewphiltrans validation --outdir outdir_analyses_we_0914 --tree-dir trees_analyses_weekend --profile-fn aa_fitness/263SelectedProfiles.tsv --np 24 --ns 2000 --seed 2167988076475850536 --c60
# -----------------------------------------------------------------------
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