Commits · 1ece636fb091785cb3167d76ff15922b7812de20 · VEBER Philippe / codepi

17 Nov, 2020 1 commit
- More precise type for detection method outputs · 8e7685ab
  Philippe Veber authored Nov 17, 2020
  
  8e7685ab
09 May, 2020 1 commit
- toolbox/Result_table: use lists to represent the set of columns · 0cbda477
  Philippe Veber authored May 09, 2020
  
  0cbda477
06 Feb, 2020 1 commit
- update wrt world · 9c9ddd3b
  Philippe Veber authored Feb 06, 2020
  
  9c9ddd3b
08 Nov, 2019 1 commit
- add pcoc_v2 (V1 implementation with C10/C60 + manual profils with V1 implementation) · e5695953
  Carine Rey authored Nov 08, 2019
  
  e5695953
08 Jul, 2019 2 commits
- Pipeline2: added pcoc · 4c01f9c5
  Philippe Veber authored Jul 08, 2019
  
  4c01f9c5
- Convergence_detection: average precision table calculation · 18183192
  Philippe Veber authored Jul 08, 2019
  
  18183192
07 Jul, 2019 1 commit
- Pipeline2: added topological and identical methods · 93aba0ca
  Philippe Veber authored Jul 07, 2019
  
  93aba0ca
26 Jun, 2019 1 commit
- Pipeline2.benchmark: added tdg09 · fde4e6e7
  Philippe Veber authored Jun 26, 2019
  
  fde4e6e7
01 Feb, 2019 3 commits
- added diffseldsparse to new benchmark · 0d244e52
  Philippe Veber authored Feb 01, 2019
  
  0d244e52
- added oracle method · cf727127
  Philippe Veber authored Feb 01, 2019
  
  cf727127
- Convergence_detection: added new utility to merge result table · ee7667e4
  Philippe Veber authored Feb 01, 2019
  
  ee7667e4
18 Jan, 2019 2 commits
- Convergence_detection: introduced simpler utility to plot alignments · dfbcc03f
  Philippe Veber authored Jan 18, 2019
  
  dfbcc03f
- Multinomial: simplified output · cbdf9bc0
  Philippe Veber authored Jan 18, 2019
  
  cbdf9bc0
14 Jan, 2019 1 commit
- update wrt bistro · 32f11ea6
  Philippe Veber authored Jan 07, 2019
  
  32f11ea6
13 Aug, 2018 1 commit
- msd: added several values for e parameter · c82b037a
  Philippe Veber authored Aug 13, 2018
  
  c82b037a
01 Aug, 2018 1 commit
- add 2 new post_analyse plots · 5d95464a
  Carine Rey authored Aug 01, 2018
  
  5d95464a
23 Jul, 2018 1 commit
- add msd_meth (not working well yet due to output msd format but compile) · 8f3a909f
  Carine Rey authored Jul 23, 2018
  
  8f3a909f
19 Jul, 2018 2 commits
- calculate and plot an auto threshold per detection methode for each input tree · 725d12e7
  Carine Rey authored Jul 19, 2018
  
  725d12e7
- Forceful removal of diffsel_bis · e233b013
  LANORE Vincent authored Jul 19, 2018
  
  e233b013
18 Jul, 2018 1 commit
- Auto indentation of everything + removed extra blank lines · b45413d6
  LANORE Vincent authored Jul 18, 2018
  
  b45413d6
17 Jul, 2018 2 commits
- add detection method: Multinomila (not yet working but the pipeline compiles) · 0e606449
  Carine Rey authored Jul 17, 2018
  
  0e606449
- add a post analyse : simu_infos · 5b243643
  Carine Rey authored Jul 17, 2018
  
  5b243643
13 Jul, 2018 1 commit
- add pcoc_C60 as detection method · 1df3c58e
  Carine Rey authored Jul 13, 2018
  
  1df3c58e
12 Jul, 2018 1 commit
- add option plot_all_sites in plot_merge_results · ada8011e
  Carine Rey authored Jul 12, 2018
  
  ada8011e
04 Jul, 2018 1 commit
- add Topological and Tdg09 detection meth (not working yet) · 3f225416
  Carine Rey authored Jul 04, 2018
  
  3f225416
03 Jul, 2018 1 commit
- add the "identical" method · 8ee06d5a
  Carine Rey authored Jul 03, 2018
  
  8ee06d5a
02 Jul, 2018 1 commit
- add a second diffsel chain · 364dcd6f
  Carine Rey authored Jul 02, 2018
  
  364dcd6f
27 Jun, 2018 3 commits
- separate diffsel module · d450d4e2
  Philippe Veber authored Jun 27, 2018
  
  d450d4e2
- separate pcoc module · 17572c94
  Philippe Veber authored Jun 27, 2018
  
  17572c94
- put each dataset variant in its own module · 2ac8dfe8
  Philippe Veber authored Jun 27, 2018
  
  2ac8dfe8
26 Jun, 2018 2 commits
- refactoring · 5379230d
  Carine Rey authored Jun 26, 2018
  
  5379230d
- add a final plot · 1b01ac9a
  Carine Rey authored Jun 26, 2018
  
  1b01ac9a
25 Jun, 2018 2 commits
- start the results merging step · 30e06eb7
  Carine Rey authored Jun 25, 2018
  
  30e06eb7
- error "Dependency cycle" to be fixed: · 4ace80f0
  Carine Rey authored Jun 25, 2018
```
Dependency cycle between modules in _build/default/lib:
   -> Tree_dataset
-> File_formats
-> Convergence_detection
-> File_formats
```
  4ace80f0
22 Jun, 2018 1 commit
- add empirical aa freqencies in simulations · 961383a1
  Carine Rey authored Jun 22, 2018
  
  961383a1
21 Jun, 2018 1 commit
- add pcoc/pcoc_gamma/diffsel · b8717f8a
  Carine Rey authored Jun 21, 2018
  
  b8717f8a