open Bistro
open File_formats

val diffseldsparse :
  ?pi:float ->
  ?shiftprob:float * float ->
  ?eps:float ->
  alignment:nucleotide_phylip file ->
  tree:_ file ->
  w_every:int ->
  n_cycles:int ->
  unit ->
  [`diffseldsparse] directory

val posterior_probabilities :
  [`diffseldsparse] directory ->
  cpt file

val readdiffseldsparse :
  [`diffseldsparse] directory ->
  [`readdiffseldsparse] directory

val check_conv :
  [`diffseldsparse] directory ->
  [`diffseldsparse_check_conv] directory

val results :
  [`readdiffseldsparse] directory ->
  cpt file