Commit bda682fc authored by NAVRATIL VINCENT's avatar NAVRATIL VINCENT
Browse files

Limit pagelenght to 5

parent 1b41d859
......@@ -81,13 +81,11 @@ shinyServer(
output$dginn_data <- DT::renderDataTable({
df <- dginn_df_reactive()
},
selection = 'single',
selection = 'single',
rownames= FALSE,
options = list( columnDefs = list( list(targets = 0, visible = FALSE))),
options = list(pageLength = 5, columnDefs = list( list(targets = 0, visible = FALSE)))
)
#renderPlotOutput -- ggTree + msa + summary
......
......@@ -8,7 +8,7 @@ shinyUI(
lang = "en",
# Application title
titlePanel("VirHostEvol - Positive selection of the SARSCov-2 viral interaction proteins."),
titlePanel("VirHostEvol - Positive selection on gene encoding the SARSCov-2 Viral Interaction Proteins."),
# Sidebar with a slider input for number of bins
sidebarLayout(
......@@ -21,9 +21,9 @@ shinyUI(
mainPanel(
tabsetPanel(type = "tabs",
tabPanel("DGINN dataset",
tabPanel("DGINN dataset - gene centered",
tags$div(class="header", checked=NA,
HTML("This table highlights the sites under positive selection infered by BppM1M2, BppM7M8, codemlM1M2, codemlM7M8 models in either primates and bats lineages for SARSCov-2 Viral Interacting proteins<br><br><b>Please select a row</b> to visualise canidates sites on top of the phylogenetic tree and the simplified Multiple Sequence Alignment (lightgrey and darkgrey region of the MSA corresponds respectively to substitution and insertion) <br>At the bottom of the phylogenetic tree and msa you can download data by following the <b>.tree</b> and <b>.fas</b> hyperlinks. </br>Add other informatio stuff ...<br><br>"),
HTML("This table is the output of DGINN software and highlights the nucleotide sites under positive selection infered by the BppM1M2, BppM7M8, codemlM1M2, codemlM7M8 models in either primates and bats taxonomic lineages for as selection of genes encoding SARSCov-2 Viral Interacting Proteins (aka VIP) identified by the Krogan Lab.<br><br><b>Please select a row</b> to visualise canidates sites on top of the phylogenetic tree and a simplified Multiple Sequence Alignment representation where lightgrey and darkgrey regions of the MSA corresponds respectively to substitution and insertion evolutionary events.<br>At the bottom of the phylogenetic tree and MSA, users you can download data by following the <b>.tree</b> and <b>.fas</b> hyperlinks. </br>Add other informatio stuff ...<br><br>"),
),
DT::dataTableOutput("dginn_data"),
plotOutput("ggtree_plot",height = "800px")
......
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