Commit 514a6bba authored by Plaszczynski Stephane's avatar Plaszczynski Stephane
Browse files

add -V option to qsub to transmit env variables

parent 359a09ea
......@@ -85,6 +85,6 @@ if [ $answer != 'o' ] ; then
echo "exiting"
exit 1
fi
qsub -P P_cobesix -q $QUEUE -l sps=1 -R y -j y -o $PWD -e $PWD -N $(basename $zeroot) zerun.sh
qsub -P P_cobesix -q $QUEUE -l sps=1 -V -R y -j y -o $PWD -e $PWD -N $(basename $zeroot) zerun.sh
cd -
......@@ -97,6 +97,6 @@ EOBATCH
#####################################################################################################################################
qsub -P P_planck_prod -t 1-5 -pe openmpi_8 8 -q pa_long camelrun
#qsub -P P_planck_prod -t 1-5 -pe multicores 8 -q mc_long camelrun
qsub -P P_planck_prod -t 1-5 -pe openmpi_8 8 -l sps=1 -V -q pa_long camelrun
#qsub -P P_planck_prod -t 1-5 -pe multicores 8 -q mc_long -l sps=1 -V camelrun
#####################################################################################################################################
......@@ -137,7 +137,7 @@ cp -f covmat "$OUTDIR"/covmat\${SGE_TASK_ID}
EOBATCH
#####################################################################################################################################
qsub -P P_planck_prod -t 6-10 -pe openmpi_8 8 -q pa_long camelrun_$zeval
qsub -P P_planck_prod -t 1-5 -pe multicores 8 -q mc_long camelrun_$zeval
qsub -P P_planck_prod -t 6-10 -pe openmpi_8 8 -q pa_long -l sps=1 -V camelrun_$zeval
qsub -P P_planck_prod -t 1-5 -pe multicores 8 -q mc_long -l sps=1 -V camelrun_$zeval
#####################################################################################################################################
done
......@@ -121,8 +121,8 @@ echo "exiting"
exit 1
fi
#qsub -P P_planck_prod -t 1-$NCHAINS -pe openmpi_$MCORE $MCORE -q pa_long -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
qsub -P P_planck_prod -t 1-$NCHAINS -pe multicores $MCORE -q mc_longlasting -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
#qsub -P P_planck_prod -t 1-$NCHAINS -pe openmpi_$MCORE $MCORE -q pa_long -l sps=1 -V -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
qsub -P P_planck_prod -t 1-$NCHAINS -pe multicores $MCORE -q mc_longlasting -l sps=1 -V -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
cd -
......@@ -108,9 +108,9 @@ if [ $answer != 'o' ] ; then
echo "exiting"
exit 1
fi
qsub -P P_planck_prod -t 1-$NCHAINS -pe openmpi_$MCORE $MCORE -q pa_long -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
#qsub -P P_planck_prod -t 1-$NCHAINS -pe multicores $MCORE -q mc_long -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
#qsub -P P_planck_prod -t 1-$NCHAINS -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
qsub -P P_planck_prod -t 1-$NCHAINS -pe openmpi_$MCORE $MCORE -q pa_long -l sps=1 -V -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
#qsub -P P_planck_prod -t 1-$NCHAINS -pe multicores $MCORE -q mc_long -l sps=1 -V -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
#qsub -P P_planck_prod -t 1-$NCHAINS -l sps=1 -V -R y -j y -o $PWD -e $PWD -N $zeroot zerun.sh
cd -
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