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Update home authored by HOURDIN Christophe's avatar HOURDIN Christophe
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......@@ -28,6 +28,8 @@ cd ${WORKDIR_EXP}/wd/BENGUELA_LR/exp
git clone --branch benguela_lr git@gitlab.in2p3.fr:christophe.hourdin/pulsation-tools.git exp1
```
## Get the netcdf input files, the croco_v2.00_orig code & the XIOS library
### Get the netcdf input files
link to, copy or download the netcdf input files directory for the BENGUELA_LR config
......@@ -74,32 +76,20 @@ DATARMOR : rsync -a /home3/datawork/chourdin/BENGUELA_LR/inputs .
if these directories are unreachable, download [BENGUELA_LR inputs tar file](https://owncloud.locean-ipsl.upmc.fr/index.php/s/7B00cuMvAjpIRl7)
### Get the xios library
e or link to the following directory
<pre>
cd ${WORKDIR_EXP} # or choose another directory
JEANZAY : rsync -a /gpfswork/rech/eee/reee084/croco_v2.00_orig .
IRENE : rsync -a /ccc/work/cont005/gen1140/hourdinc/croco_v2.00_orig .
DATARMOR : rsync -a /home3/datawork/chourdin/croco_v2.00_orig .
</pre>
if these directories are unreachable, download [ croco_v2.00_orig tar file](https://owncloud.locean-ipsl.upmc.fr/index.php/s/7B00cuMvAjpIRl7)
TEST
<pre>
sca # alias cd ${ARCHDIR}
vi JEANZAY.env # assign the CROCO_SOURCE variable
</pre>
</li>
if these directories are unreachable, download [ croco_v2.00_orig tar file](https://owncloud.locean-ipsl.upmc.fr/index.php/s/7B00cuMvAjpIRl7)
<li>
AJOUTER XIOS !!!!!
</li>
## Run the experience
<br />
<li> To submit the pre defined first job test (only 2 timesteps)
<pre>
To submit the pre defined first job test (only 2 timesteps)
```
sca # alias cd ${ARCHDIR}
vi JEANZAY.env # to customize the WORKDIR, SCRATCHDIR, STOREDIR directories to suit your environment
vi JEANZAY.header # to assign you account login
......@@ -108,13 +98,11 @@ vi JEANZAY.header # to assign you account login
# DATARMOR : no account
sc # alias cd ${SCRIPTDIR}
./submitjob.sh # to launch your experience
</pre>
</li>
```
<br />
<li> To follow the run & get the outputs
<pre>
To follow the run & get the outputs
```
JEANZAY : squeue -u $(whoami)
IRENE : ccc_mpp -u $(whoami)
DATARMOR : qstat -u $(whoami)
......@@ -122,8 +110,4 @@ jo # alias cd ${JOBDIR} ascii pulsation-tools outputs directory
exe # alias cd ${EXEDIR} croco running directory
out # alias cd ${OUTDIR} netcdf output files directory
rst # alias cd ${RSTDIR} restart files directory
</pre>
</li>
<br />
</ul>
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```
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