use apidoc for docstring documentation

docs/docstring.rst

 =====================
-Package Documentation
+EOSSR Documentation
 =====================
 
 Autogenerated documentation from docstrings.
 
-API module
--------------
+.. toctree::
+   :maxdepth: 4
+   :glob:
 
-.. automodule:: eossr.api.zenodo
-   :members:
-   :undoc-members:
-   :show-inheritance:
-
-
-Metadata module
-----------------------
-
-.. automodule:: eossr.metadata.codemeta2zenodo
-   :members:
-   :undoc-members:
-   :show-inheritance:
+   ../docstring_sources/eossr.rst
\ No newline at end of file

docs/docstring_sources/eossr.api.rst

+eossr.api package
+=================
+
+Submodules
+----------
+
+eossr.api.zenodo module
+-----------------------
+
+.. automodule:: eossr.api.zenodo
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: eossr.api
+   :members:
+   :undoc-members:
+   :show-inheritance:

docs/docstring_sources/eossr.metadata.rst

+eossr.metadata package
+======================
+
+Submodules
+----------
+
+eossr.metadata.codemeta2zenodo module
+-------------------------------------
+
+.. automodule:: eossr.metadata.codemeta2zenodo
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: eossr.metadata
+   :members:
+   :undoc-members:
+   :show-inheritance:

docs/docstring_sources/eossr.rst

+eossr package
+=============
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   eossr.api
+   eossr.metadata
+   eossr.scripts
+
+Module contents
+---------------
+
+.. automodule:: eossr
+   :members:
+   :undoc-members:
+   :show-inheritance:

docs/docstring_sources/eossr.scripts.rst

+eossr.scripts package
+=====================
+
+Submodules
+----------
+
+eossr.scripts.check\_connection\_zenodo module
+----------------------------------------------
+
+.. automodule:: eossr.scripts.check_connection_zenodo
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+eossr.scripts.eossr\_codemeta2zenodo module
+-------------------------------------------
+
+.. automodule:: eossr.scripts.eossr_codemeta2zenodo
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+eossr.scripts.eossr\_upload\_new\_deposit module
+------------------------------------------------
+
+.. automodule:: eossr.scripts.eossr_upload_new_deposit
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+eossr.scripts.eossr\_upload\_new\_version\_deposit module
+---------------------------------------------------------
+
+.. automodule:: eossr.scripts.eossr_upload_new_version_deposit
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: eossr.scripts
+   :members:
+   :undoc-members:
+   :show-inheritance: