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Commit f3b69082 authored by Lionel GUEZ's avatar Lionel GUEZ
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Correct paths of executable files 

Following modifications of `CMakeLists.txt` files.
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Inst_eddies/Tests/long_tests.json
+ 1
− 1
View file @ f3b69082
...@@ -4,7 +4,7 @@ ...@@ -4,7 +4,7 @@
[ [
["mkdir", "SHPC_cyclo", "SHPC_anti"], ["mkdir", "SHPC_cyclo", "SHPC_anti"],
[ [
"$build_dir/Inst_eddies/test_set_all_outerm", "$build_dir/Inst_eddies/Tests/test_set_all_outerm",
"$src_dir/Inst_eddies/Tests/Input/h_region_3.nc" "$src_dir/Inst_eddies/Tests/Input/h_region_3.nc"
] ]
], ],
......
Inst_eddies/Tests/short_tests.json
+ 23
− 23
View file @ f3b69082
...@@ -13,7 +13,7 @@ ...@@ -13,7 +13,7 @@
] ]
], ],
"commands": "commands":
[["mkdir", "SHPC"], "$build_dir/Inst_eddies/test_get_1_outerm"] [["mkdir", "SHPC"], "$build_dir/Inst_eddies/Tests/test_get_1_outerm"]
}, },
{ {
"description": "description":
...@@ -28,7 +28,7 @@ ...@@ -28,7 +28,7 @@
"$src_dir/Inst_eddies/Tests/Input/Region_1/outside_points.csv" "$src_dir/Inst_eddies/Tests/Input/Region_1/outside_points.csv"
], ],
"commands": "commands":
[["mkdir", "SHPC"], "$build_dir/Inst_eddies/test_get_1_outerm"] [["mkdir", "SHPC"], "$build_dir/Inst_eddies/Tests/test_get_1_outerm"]
}, },
{ {
"description": "Negative value for extremum 2.", "description": "Negative value for extremum 2.",
...@@ -45,7 +45,7 @@ ...@@ -45,7 +45,7 @@
] ]
], ],
"commands": "commands":
[["mkdir", "SHPC"], "$build_dir/Inst_eddies/test_get_1_outerm"] [["mkdir", "SHPC"], "$build_dir/Inst_eddies/Tests/test_get_1_outerm"]
}, },
{ {
"description": "description":
...@@ -58,7 +58,7 @@ ...@@ -58,7 +58,7 @@
], ],
"title": "Good_contour", "title": "Good_contour",
"command": [ "command": [
"$build_dir/Inst_eddies/test_good_contour", "$build_dir/Inst_eddies/Tests/test_good_contour",
"$src_dir/Inst_eddies/Tests/Input/example.nc" "$src_dir/Inst_eddies/Tests/Input/example.nc"
], ],
"stdin_filename": "$src_dir/Inst_eddies/Tests/Input/good_contour.txt" "stdin_filename": "$src_dir/Inst_eddies/Tests/Input/good_contour.txt"
...@@ -74,7 +74,7 @@ ...@@ -74,7 +74,7 @@
], ],
"title": "Good_contour_2", "title": "Good_contour_2",
"command": [ "command": [
"$build_dir/Inst_eddies/test_good_contour", "$build_dir/Inst_eddies/Tests/test_good_contour",
"$src_dir/Inst_eddies/Tests/Input/example.nc" "$src_dir/Inst_eddies/Tests/Input/example.nc"
], ],
"stdin_filename": "$src_dir/Inst_eddies/Tests/Input/good_contour_2.txt" "stdin_filename": "$src_dir/Inst_eddies/Tests/Input/good_contour_2.txt"
...@@ -88,7 +88,7 @@ ...@@ -88,7 +88,7 @@
], ],
"title": "No_good_contour", "title": "No_good_contour",
"command": [ "command": [
"$build_dir/Inst_eddies/test_good_contour", "$build_dir/Inst_eddies/Tests/test_good_contour",
"$src_dir/Inst_eddies/Tests/Input/example.nc" "$src_dir/Inst_eddies/Tests/Input/example.nc"
], ],
"stdin_filename": "$src_dir/Inst_eddies/Tests/Input/no_good_contour.txt" "stdin_filename": "$src_dir/Inst_eddies/Tests/Input/no_good_contour.txt"
...@@ -98,7 +98,7 @@ ...@@ -98,7 +98,7 @@
"$src_dir/Inst_eddies/Tests/Input/inside_4_true_nml.txt", "$src_dir/Inst_eddies/Tests/Input/inside_4_true_nml.txt",
"title": "Inside_4_true", "title": "Inside_4_true",
"command": [ "command": [
"$build_dir/Inst_eddies/test_inside_4", "$build_dir/Inst_eddies/Tests/test_inside_4",
"$src_dir/Inst_eddies/Tests/Input/outermost_eddy_5" "$src_dir/Inst_eddies/Tests/Input/outermost_eddy_5"
] ]
}, },
...@@ -107,7 +107,7 @@ ...@@ -107,7 +107,7 @@
"$src_dir/Inst_eddies/Tests/Input/inside_4_false_nml.txt", "$src_dir/Inst_eddies/Tests/Input/inside_4_false_nml.txt",
"title": "Inside_4_false", "title": "Inside_4_false",
"command": [ "command": [
"$build_dir/Inst_eddies/test_inside_4", "$build_dir/Inst_eddies/Tests/test_inside_4",
"$src_dir/Inst_eddies/Tests/Input/outermost_eddy_5" "$src_dir/Inst_eddies/Tests/Input/outermost_eddy_5"
] ]
}, },
...@@ -115,7 +115,7 @@ ...@@ -115,7 +115,7 @@
"input": "f", "input": "f",
"title": "Local_extrema", "title": "Local_extrema",
"command": [ "command": [
"$build_dir/Inst_eddies/test_local_extrema", "$build_dir/Inst_eddies/Tests/test_local_extrema",
"$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc" "$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc"
] ]
}, },
...@@ -124,7 +124,7 @@ ...@@ -124,7 +124,7 @@
"input": "f", "input": "f",
"title": "Local_extrema_larger", "title": "Local_extrema_larger",
"command": [ "command": [
"$build_dir/Inst_eddies/test_local_extrema", "$build_dir/Inst_eddies/Tests/test_local_extrema",
"$src_dir/Inst_eddies/Tests/Input/h_region_2.nc" "$src_dir/Inst_eddies/Tests/Input/h_region_2.nc"
] ]
}, },
...@@ -133,7 +133,7 @@ ...@@ -133,7 +133,7 @@
"description": "With input file containing missing values.", "description": "With input file containing missing values.",
"title": "Local_extrema_missing", "title": "Local_extrema_missing",
"command": [ "command": [
"$build_dir/Inst_eddies/test_local_extrema", "$build_dir/Inst_eddies/Tests/test_local_extrema",
"$src_dir/Inst_eddies/Tests/Input/h_region_4.nc" "$src_dir/Inst_eddies/Tests/Input/h_region_4.nc"
] ]
}, },
...@@ -144,7 +144,7 @@ ...@@ -144,7 +144,7 @@
"title": "Local_extrema_periodic", "title": "Local_extrema_periodic",
"command": "command":
[ [
"$build_dir/Inst_eddies/test_local_extrema", "$build_dir/Inst_eddies/Tests/test_local_extrema",
"$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc" "$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc"
] ]
}, },
...@@ -154,7 +154,7 @@ ...@@ -154,7 +154,7 @@
"input": "t\n", "input": "t\n",
"title": "Local_extrema_periodic_2", "title": "Local_extrema_periodic_2",
"command": [ "command": [
"$build_dir/Inst_eddies/test_local_extrema", "$build_dir/Inst_eddies/Tests/test_local_extrema",
"$src_dir/Inst_eddies/Tests/Input/h_2006_01_01_coarse.nc" "$src_dir/Inst_eddies/Tests/Input/h_2006_01_01_coarse.nc"
] ]
}, },
...@@ -162,7 +162,7 @@ ...@@ -162,7 +162,7 @@
"input": "&main_nml /\n", "input": "&main_nml /\n",
"title": "Max_speed_contour_ssh", "title": "Max_speed_contour_ssh",
"command": [ "command": [
"$build_dir/Inst_eddies/test_max_speed_contour_ssh", "$build_dir/Inst_eddies/Tests/test_max_speed_contour_ssh",
"$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc", "$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc",
"$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc" "$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc"
] ]
...@@ -173,7 +173,7 @@ ...@@ -173,7 +173,7 @@
"title": "Max_speed_contour_ssh_north", "title": "Max_speed_contour_ssh_north",
"command": "command":
[ [
"$build_dir/Inst_eddies/test_max_speed_contour_ssh", "$build_dir/Inst_eddies/Tests/test_max_speed_contour_ssh",
"$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc", "$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc",
"$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc" "$src_dir/Inst_eddies/Tests/Input/Region_1/huv_region_1_2006_01_01.nc"
] ]
...@@ -184,7 +184,7 @@ ...@@ -184,7 +184,7 @@
"title": "Max_speed_contour_ssh_missing", "title": "Max_speed_contour_ssh_missing",
"command": "command":
[ [
"$build_dir/Inst_eddies/test_max_speed_contour_ssh", "$build_dir/Inst_eddies/Tests/test_max_speed_contour_ssh",
"$src_dir/Inst_eddies/Tests/Input/huv_2015_11_29.nc", "$src_dir/Inst_eddies/Tests/Input/huv_2015_11_29.nc",
"$src_dir/Inst_eddies/Tests/Input/huv_2015_11_29.nc" "$src_dir/Inst_eddies/Tests/Input/huv_2015_11_29.nc"
] ]
...@@ -201,7 +201,7 @@ ...@@ -201,7 +201,7 @@
], ],
"command": "command":
[ [
"$build_dir/Inst_eddies/test_mean_speed", "$build_dir/Inst_eddies/Tests/test_mean_speed",
"$PWD/Get_1_outerm/SHPC/outermost_contour" "$PWD/Get_1_outerm/SHPC/outermost_contour"
] ]
}, },
...@@ -217,7 +217,7 @@ ...@@ -217,7 +217,7 @@
], ],
"command": "command":
[ [
"$build_dir/Inst_eddies/test_mean_speed", "$build_dir/Inst_eddies/Tests/test_mean_speed",
"$src_dir/Inst_eddies/Tests/Input/outermost_contour_alt" "$src_dir/Inst_eddies/Tests/Input/outermost_contour_alt"
] ]
}, },
...@@ -242,7 +242,7 @@ ...@@ -242,7 +242,7 @@
[ [
["mkdir", "SHPC"], ["mkdir", "SHPC"],
[ [
"$build_dir/Inst_eddies/test_set_max_speed", "$build_dir/Inst_eddies/Tests/test_set_max_speed",
"$PWD/Get_1_outerm/SHPC" "$PWD/Get_1_outerm/SHPC"
] ]
] ]
...@@ -265,7 +265,7 @@ ...@@ -265,7 +265,7 @@
[ [
["mkdir", "SHPC"], ["mkdir", "SHPC"],
[ [
"$build_dir/Inst_eddies/test_set_max_speed", "$build_dir/Inst_eddies/Tests/test_set_max_speed",
"$PWD/Get_1_outerm_noise_2_8/SHPC" "$PWD/Get_1_outerm_noise_2_8/SHPC"
] ]
] ]
...@@ -286,7 +286,7 @@ ...@@ -286,7 +286,7 @@
[ [
["mkdir", "SHPC"], ["mkdir", "SHPC"],
[ [
"$build_dir/Inst_eddies/test_set_max_speed", "$build_dir/Inst_eddies/Tests/test_set_max_speed",
"$src_dir/Inst_eddies/Tests/Input/SHPC_degenerate" "$src_dir/Inst_eddies/Tests/Input/SHPC_degenerate"
] ]
] ]
...@@ -386,7 +386,7 @@ ...@@ -386,7 +386,7 @@
"title": "Nearby_extr", "title": "Nearby_extr",
"command": "command":
[ [
"$build_dir/Inst_eddies/test_nearby_extr", "$build_dir/Inst_eddies/Tests/test_nearby_extr",
"$PWD/Inst_eddies_loop/SHPC_cyclo" "$PWD/Inst_eddies_loop/SHPC_cyclo"
], ],
"description": "We are using Inst_eddies_loop, which is a previous test." "description": "We are using Inst_eddies_loop, which is a previous test."
...@@ -403,7 +403,7 @@ ...@@ -403,7 +403,7 @@
[ [
["mkdir", "SHPC_cyclo", "SHPC_anti"], ["mkdir", "SHPC_cyclo", "SHPC_anti"],
[ [
"$build_dir/Inst_eddies/test_set_all_outerm", "$build_dir/Inst_eddies/Tests/test_set_all_outerm",
"$src_dir/Inst_eddies/Tests/Input/h_2006_01_01_coarse.nc" "$src_dir/Inst_eddies/Tests/Input/h_2006_01_01_coarse.nc"
] ]
] ]
......
Overlap/Tests/short_tests.json
+ 20
− 20
View file @ f3b69082
[ [
{ {
"title": "Weight", "title": "Weight",
"command": "$build_dir/Overlap/test_weight" "command": "$build_dir/Overlap/Tests/test_weight"
}, },
{ {
"title": "Spher_polygon_area", "title": "Spher_polygon_area",
"command": [ "command": [
"$build_dir/Overlap/test_spher_polygon_area", "$build_dir/Overlap/Tests/test_spher_polygon_area",
"$src_dir/Overlap/Tests/Input/triangle" "$src_dir/Overlap/Tests/Input/triangle"
] ]
}, },
...@@ -14,7 +14,7 @@ ...@@ -14,7 +14,7 @@
"description": "Area of a multipolygon, with a hole in one polygon.", "description": "Area of a multipolygon, with a hole in one polygon.",
"title": "Area_multi_polygon", "title": "Area_multi_polygon",
"command": [ "command": [
"$build_dir/Overlap/test_spher_polygon_area", "$build_dir/Overlap/Tests/test_spher_polygon_area",
"$src_dir/Overlap/Tests/Input/tri_square_hole" "$src_dir/Overlap/Tests/Input/tri_square_hole"
] ]
}, },
...@@ -29,7 +29,7 @@ ...@@ -29,7 +29,7 @@
"commands": "commands":
[ [
["mkdir", "SHPC"], ["mkdir", "SHPC"],
["$build_dir/Overlap/test_read_eddy"] ["$build_dir/Overlap/Tests/test_read_eddy"]
] ]
}, },
{ {
...@@ -41,7 +41,7 @@ ...@@ -41,7 +41,7 @@
"SHPC" "SHPC"
], ],
[ [
"$build_dir/Overlap/test_read_snapshot", "$build_dir/Overlap/Tests/test_read_snapshot",
"$tests_old_dir/Extraction_eddies_region_4/SHPC_anti" "$tests_old_dir/Extraction_eddies_region_4/SHPC_anti"
] ]
] ]
...@@ -52,7 +52,7 @@ ...@@ -52,7 +52,7 @@
"title": "Successive_overlap", "title": "Successive_overlap",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$tests_old_dir/Extraction_eddies_region_4/SHPC_anti" "$tests_old_dir/Extraction_eddies_region_4/SHPC_anti"
] ]
}, },
...@@ -62,7 +62,7 @@ ...@@ -62,7 +62,7 @@
"title": "Successive_overlap_region_5_one_date", "title": "Successive_overlap_region_5_one_date",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$PWD/Inst_eddies_4_anti" "$PWD/Inst_eddies_4_anti"
] ]
}, },
...@@ -72,7 +72,7 @@ ...@@ -72,7 +72,7 @@
"title": "Successive_overlap_periodic", "title": "Successive_overlap_periodic",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$tests_old_dir/Extraction_eddies_periodic/SHPC_cyclo" "$tests_old_dir/Extraction_eddies_periodic/SHPC_cyclo"
] ]
}, },
...@@ -82,7 +82,7 @@ ...@@ -82,7 +82,7 @@
"title": "Successive_overlap_different_snapshots", "title": "Successive_overlap_different_snapshots",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$tests_old_dir/Extraction_eddies_region_4/SHPC_anti" "$tests_old_dir/Extraction_eddies_region_4/SHPC_anti"
] ]
}, },
...@@ -93,7 +93,7 @@ ...@@ -93,7 +93,7 @@
"title": "Successive_overlap_region_2", "title": "Successive_overlap_region_2",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$tests_old_dir/Extraction_eddies_region_2_noise/SHPC_anti" "$tests_old_dir/Extraction_eddies_region_2_noise/SHPC_anti"
] ]
}, },
...@@ -103,7 +103,7 @@ ...@@ -103,7 +103,7 @@
"title": "Successive_overlap_region_5", "title": "Successive_overlap_region_5",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$PWD/Inst_eddies_4_anti" "$PWD/Inst_eddies_4_anti"
] ]
}, },
...@@ -113,7 +113,7 @@ ...@@ -113,7 +113,7 @@
"title": "Successive_overlap_global", "title": "Successive_overlap_global",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$PWD/Inst_eddies_5_anti" "$PWD/Inst_eddies_5_anti"
] ]
}, },
...@@ -123,7 +123,7 @@ ...@@ -123,7 +123,7 @@
"title": "Non_successive_overlap", "title": "Non_successive_overlap",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$tests_old_dir/Extraction_eddies_region_4/SHPC_anti" "$tests_old_dir/Extraction_eddies_region_4/SHPC_anti"
] ]
}, },
...@@ -134,7 +134,7 @@ ...@@ -134,7 +134,7 @@
"title": "NSO_different_snapshots", "title": "NSO_different_snapshots",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$tests_old_dir/Extraction_eddies_region_4/SHPC_anti" "$tests_old_dir/Extraction_eddies_region_4/SHPC_anti"
] ]
}, },
...@@ -145,7 +145,7 @@ ...@@ -145,7 +145,7 @@
"title": "NSO_region_5", "title": "NSO_region_5",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$PWD/Inst_eddies_4_anti" "$PWD/Inst_eddies_4_anti"
] ]
}, },
...@@ -156,7 +156,7 @@ ...@@ -156,7 +156,7 @@
"title": "NSO_global", "title": "NSO_global",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$PWD/Inst_eddies_5_anti" "$PWD/Inst_eddies_5_anti"
] ]
}, },
...@@ -166,7 +166,7 @@ ...@@ -166,7 +166,7 @@
"title": "NSO_delta", "title": "NSO_delta",
"command": "command":
[ [
"$build_dir/Overlap/test_overlap", "$build_dir/Overlap/Tests/test_overlap",
"$tests_old_dir/Region_6/SHPC_anti" "$tests_old_dir/Region_6/SHPC_anti"
] ]
}, },
...@@ -184,7 +184,7 @@ ...@@ -184,7 +184,7 @@
"$mpiexec", "$mpiexec",
"-n", "-n",
"2", "2",
"$build_dir/Overlap/test_send_recv", "$build_dir/Overlap/Tests/test_send_recv",
"$tests_old_dir/Extraction_eddies_region_4/SHPC_anti" "$tests_old_dir/Extraction_eddies_region_4/SHPC_anti"
] ]
] ]
...@@ -203,7 +203,7 @@ ...@@ -203,7 +203,7 @@
"$mpiexec", "$mpiexec",
"-n", "-n",
"1", "1",
"$build_dir/Overlap/test_get_dispatch_snap", "$build_dir/Overlap/Tests/test_get_dispatch_snap",
"$tests_old_dir/Inst_eddies_loop/SHPC_cyclo" "$tests_old_dir/Inst_eddies_loop/SHPC_cyclo"
] ]
] ]
...@@ -222,7 +222,7 @@ ...@@ -222,7 +222,7 @@
"$mpiexec", "$mpiexec",
"-n", "-n",
"2", "2",
"$build_dir/Overlap/test_get_dispatch_snap", "$build_dir/Overlap/Tests/test_get_dispatch_snap",
"$tests_old_dir/Inst_eddies_loop/SHPC_cyclo" "$tests_old_dir/Inst_eddies_loop/SHPC_cyclo"
] ]
] ]
......
Tests/tests.json
+ 1
− 1
View file @ f3b69082
[ [
{ {
"title": "Spher_polyline_area", "title": "Spher_polyline_area",
"command": "$build_dir/test_spher_polyline_area" "command": "$build_dir/Tests/test_spher_polyline_area"
} }
] ]
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