.gitignore

+# CMake build
+bld
+BLD
+build
+BUILD
+
+
+# Latex files from compilation
+*.out
+*.log
+*.aux
+*.toc
+*.synctex.gz
+
+# Compiled Object files
+*.slo
+*.lo
+*.o
+*.obj
+
+# Precompiled Headers
+*.gch
+*.pch
+
+# Compiled Dynamic libraries
+*.so
+*.dylib
+*.dll
+
+# Fortran module files
+*.mod
+
+# Compiled Static libraries
+*.lai
+*.la
+*.a
+*.lib
+
+# Executables
+*.exe
+*.ex
+*.out
+*.app
+*.pcm
+CLASS_R2*
+
+# ROOT files
+*.root
+*Dict.cxx
+*dict.cxx
+*Dict.h
+*dict.h
+
+# Google Tests
+GTest/RunTest
+
+# CLASS files
+DATA_BASES/DECAY/ALL/Decay.idx
+
+# sym link to model headers
+source/include/Equivalence
+source/include/XS
+source/include/external
+source/include/Irradiation
+
+# Makefile configuration folder:
+config
+
+# folder containing the binaries :
+bin
+
+# Built doxygen :
+documentation/doxygen/html/doxygen
+
+# Environment variables :
+class_env.sh
+
+# CLASS Outputs :
+DecayDataBank.log
+CLASS_Exec
+CLASS_OUTPUT.log
+CLASS_TimeStep
+	# Utils outputs
+Utils/XSM/MLP/Generate/Generate_XSM
+Utils/XSM/MLP/Generate/Train_XS	
+Utils/XSM/MLP/Generate/Data_Base_Info.nfo
+Utils/XSM/MLP/Generate/_tmp
+Utils/XSM/MLP/Generate/Trainining_output*
+Utils/XSM/MLP/Generate/weights
+Utils/XSM/MLP/Test/Mean_XS_accuracy.dat
+Utils/XSM/MLP/Test/plots
+Utils/EQM/MLP_Kinf/Generate_MLP_Kinf
+Utils/EQM/MLP_Kinf/Train	
+Utils/EQM/MLP_Kinf/*.nfo
+Utils/EQM/MLP_Kinf/_tmp
+Utils/EQM/MLP_Kinf/Trainining_output*
+Utils/EQM/MLP_Kinf/weights
+Utils/EQM/MLP_Kinf/Train
+Utils/EQM/FBR_MLP_Keff/Generate_FBR_Keff
+Utils/EQM/FBR_MLP_Keff/Train
+Utils/EQM/FBR_MLP_Keff/*.nfo
+Utils/EQM/FBR_MLP_Keff/_tmp
+Utils/EQM/FBR_MLP_Keff/weights
+Utils/MURE2CLASS/MURE2CLASS
+
+
+
+# ----------------------------------------------------------------------------
+# For Mac OS
+.DS_Store
+.AppleDouble
+.LSOverride
+
+# Icon must end with two \r
+Icon
+
+
+# Thumbnails
+._*
+
+# Files that might appear in the root of a volume
+.DocumentRevisions-V100
+.fseventsd
+.Spotlight-V100
+.TemporaryItems
+.Trashes
+.VolumeIcon.icns
+
+# Directories potentially created on remote AFP share
+.AppleDB
+.AppleDesktop
+Network Trash Folder
+Temporary Items
+.apdisk
+
+# ----------------------------------------------------------------------------
+# For Xcode
+# Build generated
+build/
+DerivedData/
+
+# For VScode
+.vscode
+
+# Various settings
+*.pbxuser
+!default.pbxuser
+*.mode1v3
+!default.mode1v3
+*.mode2v3
+!default.mode2v3
+*.perspectivev3
+!default.perspectivev3
+xcuserdata/
+
+# Other
+*.moved-aside
+*.xccheckout
+*.xcscmblueprint
+
+# ----------------------------------------------------------------------------
+# for Linux
+*~
+
+# temporary files which can be created if a process still has a handle open of a deleted file
+.fuse_hidden*
+
+# KDE directory preferences
+.directory
+
+# Linux trash folder which might appear on any partition or disk
+.Trash-*
+
+# ----------------------------------------------------------------------------
+# For SublimeText
+# cache files for sublime text
+*.tmlanguage.cache
+*.tmPreferences.cache
+*.stTheme.cache
+
+# workspace files are user-specific
+*.sublime-workspace
+
+# project files should be checked into the repository, unless a significant
+# proportion of contributors will probably not be using SublimeText
+# *.sublime-project
+
+# sftp configuration file
+sftp-config.json
+lib
+bld
+build

.gitlab-ci.yml

+image: rootproject/root
+
+stages:
+    - build
+
+    
+job1:
+    stage: build
+    script:
+        - ./install.sh build

CMakeLists.txt

+# ----------------------------------------------------------
+# Project name
+# ----------------------------------------------------------
+
+project(Class CXX)
+
+# ----------------------------------------------------------
+# Minimum Cmake version
+# ----------------------------------------------------------
+
+CMAKE_MINIMUM_REQUIRED(VERSION 2.8 FATAL_ERROR)
+
+set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -Wall -g")
+
+# ----------------------------------------------------------
+# Test CXX compiler and C++11 comptability
+# ----------------------------------------------------------
+
+INCLUDE(CheckCXXCompilerFlag)
+CHECK_CXX_COMPILER_FLAG("-std=c++11" COMPILER_SUPPORTS_CXX11)
+IF(COMPILER_SUPPORTS_CXX11)
+  SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -O3 -fPIC")
+ELSE()
+  MESSAGE(STATUS "The compiler ${CMAKE_CXX_COMPILER} has no C++11 support. Please use a different C++ compiler.")
+ENDIF()
+
+# ----------------------------------------------------------
+# ROOT integration
+# ----------------------------------------------------------
+
+# defining ROOT location
+list(APPEND CMAKE_PREFIX_PATH $ENV{ROOTSYS})
+
+# Defining needed classes
+FIND_PACKAGE(ROOT REQUIRED COMPONENTS TMVA Gui)
+
+MESSAGE("------- ROOT PATH DETECTION -------")
+
+IF (ROOT_FOUND)
+  MESSAGE(STATUS "ROOT has been found")
+ELSE ()
+  MESSAGE(FATAL_ERROR "ROOT Not found")   
+ENDIF()
+
+MESSAGE("-- Include path   : ${ROOT_INCLUDE_DIRS}")
+MESSAGE("-- Libraries list : ${ROOT_LIBRARIES}")
+MESSAGE("-- Libraries DIR  : ${ROOT_LIBRARY_DIR}")
+MESSAGE("-- Definitions    : ${ROOT_DEFINITIONS}")
+MESSAGE("-- CXX Flags      : ${ROOT_CXX_FLAGS}")
+MESSAGE("-- CC Flags       : ${ROOT_CC_FLAGS}")
+MESSAGE("------------------------------------")
+
+# Use ROOT file
+
+INCLUDE(${ROOT_USE_FILE})
+
+# Add directories
+INCLUDE_DIRECTORIES(${CMAKE_SOURCE_DIR} ${ROOT_INCLUDE_DIRS})
+
+# ----------------------------------------------------------
+# Variables definitions
+# ----------------------------------------------------------
+
+set(CMAKE_INSTALL_LIBDIR ${CMAKE_CURRENT_LIST_DIR}/lib)
+set(CMAKE_LIBRARY_OUTPUT_DIRECTORY ${CMAKE_CURRENT_LIST_DIR}/lib)
+set(CMAKE_ARCHIVE_OUTPUT_DIRECTORY ${CMAKE_CURRENT_LIST_DIR}/lib)
+
+set(CMAKE_RUNTIME_OUTPUT_DIRECTORY ${CMAKE_CURRENT_LIST_DIR}/bin)
+
+# print all
+MESSAGE( STATUS "CMAKE_LIBRARY_OUTPUT_DIRECTORY :" ${CMAKE_LIBRARY_OUTPUT_DIRECTORY})
+
+# ----------------------------------------------------------
+# Add Directories
+# ----------------------------------------------------------
+
+# Build Decay.idx File
+add_subdirectory(DATA_BASES/DECAY/ALL)
+
+# Add source
+ADD_SUBDIRECTORY(source)
+
+# Add gui
+ADD_SUBDIRECTORY(gui)
+
+################################
+# GTest
+################################
+
+enable_testing()
+add_subdirectory(GTest)

DATA_BASES/DECAY/ALL/CMakeLists.txt

+# ----------------------------------------------------------
+# Modify template and build Decay.idx
+# ----------------------------------------------------------
+message(STATUS "COMMAND : sed -e 's:PATHTOBASE:${CMAKE_CURRENT_SOURCE_DIR}:g' Decay.in > Decay.idx")
+execute_process(COMMAND bash "-c" "sed -e 's:PATHTOBASE:${CMAKE_CURRENT_SOURCE_DIR}:g' ${CMAKE_CURRENT_SOURCE_DIR}/Decay.in > ${CMAKE_CURRENT_SOURCE_DIR}/Decay.idx")