long_tests.json

[
    {
	"commands":
	[
	    [
		"mkdir", "-p", "SHPC/Slice_0/Cyclones",
		"SHPC/Slice_0/Anticyclones"
	    ],
	    "$build_dir/Inst_eddies/Tests/test_set_all_outerm"
	],
	"title": "Set_all_outerm",
	"create_file": ["config_nml.txt", "&config_nml min_radius = 20./\n"],
	"symlink":
	[
	    ["$src_dir/Inst_eddies/Tests/Input/h_region_3.nc", "h.nc"],
	    ["$src_dir/Inst_eddies/Tests/Input/uv_region_3.nc", "uv.nc"]
	]
    },
    {
	"commands":
	[
	    [
		"mkdir", "-p", "SHPC/Slice_0/Cyclones",
		"SHPC/Slice_0/Anticyclones"
	    ],
	    "$build_dir/Inst_eddies/inst_eddies"
	],
	"title": "Extraction_eddies_region_3",
	"symlink":
	[
	    ["$src_dir/Inst_eddies/Tests/Input/h_region_3.nc", "h.nc"],
	    ["$src_dir/Inst_eddies/Tests/Input/uv_region_3.nc", "uv.nc"]
	],
	"create_file": ["config_nml.txt", "&config_nml min_amp = 0./\n"],
	"input": "&dates_nml date = 20454/\n",
	"description": "Larger region, 120 x 120. Includes degenerate extrema."
    },
    {
	"commands":
	[
	    [
		"mkdir", "-p", "SHPC/Slice_0/Cyclones",
		"SHPC/Slice_0/Anticyclones"
	    ],
	    "$build_dir/Inst_eddies/inst_eddies"
	],
	"title": "Extraction_eddies_region_3_min",
	"symlink":
	[
	    ["$src_dir/Inst_eddies/Tests/Input/h_region_3.nc", "h.nc"],
	    ["$src_dir/Inst_eddies/Tests/Input/uv_region_3.nc", "uv.nc"]
	],
	"create_file": ["config_nml.txt", "&config_nml /\n"],
	"input": "&dates_nml date = 20454/\n",
	"description":
	"Same as Extraction_eddies_region_3 except with 1 mm minimum amplitude."
    },
    {
	"commands":
	[
	    [
		"mkdir", "-p", "SHPC/Slice_0/Cyclones",
		"SHPC/Slice_0/Anticyclones"
	    ],
	    "$build_dir/Inst_eddies/inst_eddies"
	],
	"title": "Extraction_eddies_region_5",
	"symlink":
	[
	    ["$src_dir/Inst_eddies/Tests/Input/h_region_5.nc", "h.nc"],
	    ["$src_dir/Inst_eddies/Tests/Input/uv_region_5.nc", "uv.nc"]
	],
	"create_file": ["config_nml.txt", "&config_nml /\n"],
	"input": "&dates_nml date = 20454/\n",
	"description": "Same as Extraction_eddies_region_4 with larger domain.",
	"exclude_cmp": ["n_slices.txt"]
    },
    {
        "create_file": ["config_nml.txt", "&config_nml /\n"],
        "title": "Extraction_eddies_region_2_noise",
        "command":
	[
	    "$build_dir/Inst_eddies/inst_eddies_Aviso.py",
	    "-b", "1.625", "15.625", "-38.375", "-30.375",
	    "$large_input_dir/dt_global_allsat_phy_l4_20060101_20210726.nc",
	    "--template=dt_global_allsat_phy_l4_%Y%m%d_20210726.nc", "-l",
	    "20060115"
	],
	"input": "20454\n"
    },
    {
        "create_file": ["config_nml.txt", "&config_nml /\n"],
        "title": "Region_6",
        "command":
	[
            "$build_dir/Inst_eddies/inst_eddies.py",
	    "$large_input_dir/dt_global_allsat_phy_l4_20060101_20210726.nc",
	    "$large_input_dir/dt_global_allsat_phy_l4_20060102_20210726.nc",
	    "-b", "5.875", "12.125", "-32.125", "-26.875"
        ],
	"input": "20454\n0\n"
    },
    {
        "create_file": ["config_nml.txt", "&config_nml /\n"],
        "title": "Missing_file",
        "command":
	[
            "$build_dir/Inst_eddies/inst_eddies_Aviso.py",
	    "$large_input_dir/dataset-duacs-global-allsat-phy-2020-01-31.nc",
	    "--template=dataset-duacs-global-allsat-phy-%Y-%m-%d.nc", "-l",
	    "20200202"
        ],
	"input": "25597\n",
	"description":
	"Date 2020-02-01 is missing. Test of the script with a missing date."
    },
    {
	"title": "Greece",
	"description":
	"This is a case where the speed is not defined on a whole segment.",
	"command":
	[
	    "$build_dir/Inst_eddies/inst_eddies_Aviso.py",
	    "--template=dt_global_allsat_phy_l4_%Y%m%d_20210726.nc",
	    "--last_date=1993-03-31", "--bbox", "20", "30", "35", "42",
	    "$large_input_dir/dt_global_allsat_phy_l4_19930101_20210726.nc"
	],
        "create_file": ["config_nml.txt", "&config_nml /\n"]
    },
    {
	"title": "Region_5_15_days",
	"description":"This is used in several tests if overlap.",
	"command":
	[
	    "$build_dir/Inst_eddies/inst_eddies_Aviso.py",
	    "--template=dt_global_allsat_phy_l4_%Y%m%d_20210726.nc",
	    "--last_date=2006-01-15", "--bbox", "0.125", "29.875", "-59.875",
	    "-15.125",
	    "$large_input_dir/dt_global_allsat_phy_l4_20060101_20210726.nc"
	],
        "create_file": ["config_nml.txt", "&config_nml /\n"]
    }
]