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/*****************************************************************************
* Copyright (C) 2009-2019 this file is part of the NPTool Project *
* *
* For the licensing terms see $NPTOOL/Licence/NPTool_Licence *
* For the list of contributors see $NPTOOL/Licence/Contributors *
*****************************************************************************/
/*****************************************************************************
* Original Author: Adrien Matta contact address: matta@lpccaen.in2p3.fr *
* *
* Creation Date : December 2019 *
* Last update : *
*---------------------------------------------------------------------------*
* Decription: *
* This class hold Nebula Treated data *
* *
*---------------------------------------------------------------------------*
* Comment: *
* *
* *
*****************************************************************************/
#include "TNebulaPhysics.h"
// STL
#include <sstream>
#include <iostream>
#include <cmath>
#include <stdlib.h>
#include <limits>
using namespace std;
// NPL
#include "RootInput.h"
#include "RootOutput.h"
#include "NPDetectorFactory.h"
#include "NPOptionManager.h"
// ROOT
#include "TChain.h"
ClassImp(TNebulaPhysics)
///////////////////////////////////////////////////////////////////////////
TNebulaPhysics::TNebulaPhysics()
: m_EventData(new TNebulaData),
m_PreTreatedData(new TNebulaData),
m_EventPhysics(this),
m_Spectra(0),
m_E_RAW_Threshold(0), // adc channels
m_E_Threshold(0), // MeV
}
///////////////////////////////////////////////////////////////////////////
/// A usefull method to bundle all operation to add a detector
void TNebulaPhysics::ReadXML(NPL::XmlParser xml){
m_NumberOfBars++;
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::BuildSimplePhysicalEvent() {
BuildPhysicalEvent();
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::BuildPhysicalEvent() {
// apply thresholds and calibration
PreTreat();
// match energy and time together
unsigned int mysizeE = m_PreTreatedData->GetMultEnergy();
unsigned int mysizeT = m_PreTreatedData->GetMultTime();
for (UShort_t e = 0; e < mysizeE ; e++) {
for (UShort_t t = 0; t < mysizeT ; t++) {
if (m_PreTreatedData->GetE_DetectorNbr(e) == m_PreTreatedData->GetT_DetectorNbr(t)) {
DetectorNumber.push_back(m_PreTreatedData->GetE_DetectorNbr(e));
Energy.push_back(m_PreTreatedData->Get_Energy(e));
Time.push_back(m_PreTreatedData->Get_Time(t));
}
}
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::PreTreat() {
// This method typically applies thresholds and calibrations
// Might test for disabled channels for more complex detector
// clear pre-treated object
ClearPreTreatedData();
// instantiate CalibrationManager
static CalibrationManager* Cal = CalibrationManager::getInstance();
// Energy
unsigned int mysize = m_EventData->GetMultEnergy();
for (UShort_t i = 0; i < mysize ; ++i) {
if (m_EventData->Get_Energy(i) > m_E_RAW_Threshold) {
Double_t Energy = Cal->ApplyCalibration("Nebula/ENERGY"+NPL::itoa(m_EventData->GetE_DetectorNbr(i)),m_EventData->Get_Energy(i));
if (Energy > m_E_Threshold) {
m_PreTreatedData->SetEnergy(m_EventData->GetE_DetectorNbr(i), Energy);
}
}
}
// Time
mysize = m_EventData->GetMultTime();
for (UShort_t i = 0; i < mysize; ++i) {
Double_t Time= Cal->ApplyCalibration("Nebula/TIME"+NPL::itoa(m_EventData->GetT_DetectorNbr(i)),m_EventData->Get_Time(i));
m_PreTreatedData->SetTime(m_EventData->GetT_DetectorNbr(i), Time);
}
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}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::ReadAnalysisConfig() {
bool ReadingStatus = false;
// path to file
string FileName = "./configs/ConfigNebula.dat";
// open analysis config file
ifstream AnalysisConfigFile;
AnalysisConfigFile.open(FileName.c_str());
if (!AnalysisConfigFile.is_open()) {
cout << " No ConfigNebula.dat found: Default parameter loaded for Analayis " << FileName << endl;
return;
}
cout << " Loading user parameter for Analysis from ConfigNebula.dat " << endl;
// Save it in a TAsciiFile
TAsciiFile* asciiConfig = RootOutput::getInstance()->GetAsciiFileAnalysisConfig();
asciiConfig->AppendLine("%%% ConfigNebula.dat %%%");
asciiConfig->Append(FileName.c_str());
asciiConfig->AppendLine("");
// read analysis config file
string LineBuffer,DataBuffer,whatToDo;
while (!AnalysisConfigFile.eof()) {
// Pick-up next line
getline(AnalysisConfigFile, LineBuffer);
// search for "header"
string name = "ConfigNebula";
if (LineBuffer.compare(0, name.length(), name) == 0)
ReadingStatus = true;
// loop on tokens and data
while (ReadingStatus ) {
whatToDo="";
AnalysisConfigFile >> whatToDo;
// Search for comment symbol (%)
if (whatToDo.compare(0, 1, "%") == 0) {
AnalysisConfigFile.ignore(numeric_limits<streamsize>::max(), '\n' );
}
else if (whatToDo=="E_RAW_THRESHOLD") {
AnalysisConfigFile >> DataBuffer;
m_E_RAW_Threshold = atof(DataBuffer.c_str());
cout << whatToDo << " " << m_E_RAW_Threshold << endl;
}
else if (whatToDo=="E_THRESHOLD") {
AnalysisConfigFile >> DataBuffer;
m_E_Threshold = atof(DataBuffer.c_str());
cout << whatToDo << " " << m_E_Threshold << endl;
}
else {
ReadingStatus = false;
}
}
}
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::Clear() {
DetectorNumber.clear();
Energy.clear();
Time.clear();
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::ReadConfiguration(NPL::InputParser parser) {
vector<NPL::InputBlock*> blocks = parser.GetAllBlocksWithToken("NEBULA");
if(NPOptionManager::getInstance()->GetVerboseLevel())
cout << "//// " << blocks.size() << " detector(s) found " << endl;
vector<string> token= {"XML","Offset","InvertX","InvertY"};
for(unsigned int i = 0 ; i < blocks.size() ; i++){
if(blocks[i]->HasTokenList(token)){
cout << endl << "//// Nebula (" << i+1 << ")" << endl;
unsigned int det = std::atoi(blocks[i]->GetMainValue().c_str());
string xmlpath = blocks[i]->GetString("XML");
NPL::XmlParser xml;
xml.LoadFile(xmlpath);
ReadXML(xml);
TVector3 offset = blocks[i]->GetTVector3("Offset","mm");
bool invertX = blocks[i]->GetInt("InvertX");
bool invertY = blocks[i]->GetInt("InvertY");
m_offset[det] = offset;
m_invertX[det] = invertX;
m_invertY[det] = invertY;
}
}
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::InitSpectra() {
m_Spectra = new TNebulaSpectra(m_NumberOfBars);
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}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::FillSpectra() {
m_Spectra -> FillRawSpectra(m_EventData);
m_Spectra -> FillPreTreatedSpectra(m_PreTreatedData);
m_Spectra -> FillPhysicsSpectra(m_EventPhysics);
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::CheckSpectra() {
m_Spectra->CheckSpectra();
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::ClearSpectra() {
// To be done
}
///////////////////////////////////////////////////////////////////////////
map< string , TH1*> TNebulaPhysics::GetSpectra() {
if(m_Spectra)
return m_Spectra->GetMapHisto();
else{
map< string , TH1*> empty;
return empty;
}
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::WriteSpectra() {
m_Spectra->WriteSpectra();
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::AddParameterToCalibrationManager() {
CalibrationManager* Cal = CalibrationManager::getInstance();
for (int i = 0; i < m_NumberOfBars; ++i) {
Cal->AddParameter("NEBULA_ID"+ NPL::itoa(i+1)+"_T");
Cal->AddParameter("NEBULA_ID"+ NPL::itoa(i+1)+"_Y");
}
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::InitializeRootInputRaw() {
TChain* inputChain = RootInput::getInstance()->GetChain();
inputChain->SetBranchStatus("Nebula", true );
inputChain->SetBranchAddress("Nebula", &m_EventData );
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::InitializeRootInputPhysics() {
TChain* inputChain = RootInput::getInstance()->GetChain();
inputChain->SetBranchAddress("Nebula", &m_EventPhysics);
}
///////////////////////////////////////////////////////////////////////////
void TNebulaPhysics::InitializeRootOutput() {
TTree* outputTree = RootOutput::getInstance()->GetTree("Nebula");
outputTree->Branch("Nebula", "TNebulaPhysics", &m_EventPhysics);
}
////////////////////////////////////////////////////////////////////////////////
// Construct Method to be pass to the DetectorFactory //
////////////////////////////////////////////////////////////////////////////////
NPL::VDetector* TNebulaPhysics::Construct() {
return (NPL::VDetector*) new TNebulaPhysics();
}
////////////////////////////////////////////////////////////////////////////////
// Registering the construct method to the factory //
////////////////////////////////////////////////////////////////////////////////
extern "C"{
class proxy_Nebula{
public:
proxy_Nebula(){
NPL::DetectorFactory::getInstance()->AddToken("NEBULA","Nebula");
NPL::DetectorFactory::getInstance()->AddDetector("NEBULA",TNebulaPhysics::Construct);
}
};
proxy_Nebula p_Nebula;
}