Revert "Revert "Merge branch 'NPTool.2.dev' of https://gitlab.in2p3.fr/np/nptool into NPTool.2.dev""

This reverts commit a2a576ad.

This reverts commit 2907ec54, reversing
changes made to a5b50e27.

  kinematics

        - adding a typedef of NPParticle into NPNucleus to solve
        backward compatibility
        - changing QFS and Reaction to match new terminology

nps
        - the flag is --random-seed

Physics folder

        - Since the introduction of G4Region to simulate reaction it was
        impossible de reload a geometry without a segfault
        - Problem is convolutated and was fixed by preserving the world
        from the reload
        - Still an issue remain, we cannot change the branches of the
        output tree without a seg fault, need to be investigated

        - No longer used event generator in NPS
* Updating Show results to match the User definition of 10He in Example1

        - The User defined nuclei is define as a sum of sub part +
        binding energy
        - It take precedence on regular definition
        - It does not work with decay yet

feature 1 (in progress): Adding a new token to shoot cross randomly in the lab system from a cross section file, feature 2: include syntax for reactions with isomeric states of the beam.

experiment

Adding an argument for particle-3 phi in the lab to take calculate correctly recoil Phi angle, usefule for recoil spec and in some case to Doppler correction

* updating copyright
* updating a matta email

! angular ditribution from an TH1F histogram to simulate p, d, t...

        * Issue was in NPeam deleting histo before root tries
        * also pass a couple of variable to the heap instead of the stack

* option is given

* Updating copyright
* adding AnnularS1Physics class

* The code compile and run but still need confirmation that it work as
* expected
* Modification does not affect the usual single differential way of
* working

 - Similar mecanism to the CS system
 - Allow user to provide a random Ex distribution in txt or root file
   format
* Changing Display of Gaspard, Paris and Must2 detector for the GMAP_LOI preparation

Al and Kapton material added to Plastic

*Adding some getter in NPreaction

 - In the case of multiinteraction in the same volume, the scorer was keeping only the last energy deposit, instead of summing them
 - The threshold has been move in the Read sensitive and is no longer in the scorer, as the energy deposit can be down in multiple step each of them below threshold and be ignored if the threshold is applyed individually.

 - NPReaction: The Cint Dict generation need the destructor to be of type virtual to be overloaded safely by the dictionnary
 - TSharcPhysics: Some variable embeded in if statement migth be used uninitialised from a compilation point of view.

 - putting the update date 2009-2013
 - Adding some missing liscence header
 - moving some #ifndef to avoid copy of comment
 - fixing minor compilation bug in TSpegPhysics

 - fixing couple of bug
 - remove some warning
 - enhance performance

 - Only one read configuration file method
 - lighter code
 - possibility to use TH1F for cross section shoot

 - Add associate class in NPL
 - Add Function in NPL

Some code clean up has been done as well (cosmetic change for the most)